Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog ykoK - Streptococcaceae

Properties
Regulator type: RNA regulatory element
Name: ykoK
RFAM: RF00380
Regulation mode:
Biological process: Magnesium homeostasis
Effector: Magnesium ion, (Mg2+)
Phylum: Firmicutes
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Streptococcus pneumoniae TIGR4
Streptococcus equi subsp. zooepidemicus MGCS10565
Streptococcus gordonii str. Challis substr. CH1 1 1
Streptococcus thermophilus CNRZ1066
Streptococcus mutans UA159
Streptococcus pyogenes M1 GAS
Streptococcus sanguinis SK36 2 1
Streptococcus agalactiae 2603V/R
Streptococcus uberis 0140J
Lactococcus lactis subsp. cremoris SK11 1 1
Lactococcus lactis subsp. lactis Il1403 1 1
Streptococcus suis 05ZYH33
Streptococcus dysgalactiae subsp. equisimilis GGS_124
Streptococcus gallolyticus UCN34
Streptococcus mitis B6 1 1
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
SSA_1735
 
Streptococcus pneumoniae TIGR4
 
Streptococcus equi subsp. zooepidemicus MGCS10565
 
Streptococcus gordonii str. Challis substr. CH1
 
Streptococcus thermophilus CNRZ1066
 
Streptococcus mutans UA159
 
Streptococcus pyogenes M1 GAS
*
Streptococcus sanguinis SK36

Site:
position = -307
score = 66.06
sequence = AGTGAAAAATCGGTA...

Gene: SSA_1735: hypothetical protein
 
Streptococcus agalactiae 2603V/R
 
Streptococcus uberis 0140J
 
Lactococcus lactis subsp. cremoris SK11
 
Lactococcus lactis subsp. lactis Il1403
 
Streptococcus suis 05ZYH33
 
Streptococcus dysgalactiae subsp. equisimilis GGS_124
 
Streptococcus gallolyticus UCN34
 
Streptococcus mitis B6
hypothetical protein
mgtB
 
Streptococcus pneumoniae TIGR4
 
Streptococcus equi subsp. zooepidemicus MGCS10565
*
Streptococcus gordonii str. Challis substr. CH1

Site:
position = -430
score = 65.36
sequence = AATGGAAAATCGGTA...

Gene: SGO_1634: Mg(2+) transport ATPase, P-type (EC 3.6.3.2)
 
Streptococcus thermophilus CNRZ1066
 
Streptococcus mutans UA159
 
Streptococcus pyogenes M1 GAS
 
Streptococcus sanguinis SK36

Gene: SSA_1734: Mg(2+) transport ATPase, P-type (EC 3.6.3.2)
 
Streptococcus agalactiae 2603V/R
 
Streptococcus uberis 0140J
*
Lactococcus lactis subsp. cremoris SK11

Site:
position = -413
score = 93.65
sequence = GCATAGCCATCGGTA...

Gene: LACR_1370: Mg(2+) transport ATPase, P-type (EC 3.6.3.2)
*
Lactococcus lactis subsp. lactis Il1403

Site:
position = -420
score = 90.87
sequence = GCATAGCCGTCGGTA...

Gene: L85514: Mg(2+) transport ATPase, P-type (EC 3.6.3.2)
 
Streptococcus suis 05ZYH33
 
Streptococcus dysgalactiae subsp. equisimilis GGS_124
 
Streptococcus gallolyticus UCN34
*
Streptococcus mitis B6

Site:
position = -346
score = 64.4
sequence = GAAAACGGTAGGTGA...

Gene: smi_1923: Mg(2+) transport ATPase, P-type (EC 3.6.3.2)
Mg(2+) transport ATPase, P-type (EC 3.6.3.2)
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulatory Sites [ FASTA format ] DOWNLOAD