Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog preQ1-II - Streptococcaceae

Properties
Regulator type: RNA regulatory element
Name: preQ1-II
RFAM: RF01054
Regulation mode:
Biological process: Queuosine biosynthesis
Effector: Pre-queuosine
Phylum: Firmicutes
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Streptococcus pneumoniae TIGR4 1 1
Streptococcus gallolyticus UCN34 1 1
Streptococcus dysgalactiae subsp. equisimilis GGS_124 1 1
Streptococcus suis 05ZYH33 1 1
Lactococcus lactis subsp. lactis Il1403 1 1
Lactococcus lactis subsp. cremoris SK11 1 1
Streptococcus uberis 0140J 1 1
Streptococcus agalactiae 2603V/R 1 1
Streptococcus sanguinis SK36 1 1
Streptococcus pyogenes M1 GAS 1 1
Streptococcus mutans UA159 1 1
Streptococcus thermophilus CNRZ1066
Streptococcus gordonii str. Challis substr. CH1 1 1
Streptococcus equi subsp. zooepidemicus MGCS10565 1 1
Streptococcus mitis B6 1 1
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
queT
*
Streptococcus pneumoniae TIGR4

Site:
position = -93
score = 100.73
sequence = GTGCTATACTAGTAA...

Gene: SP_1012: Substrate-specific component QueT (COG4708) of predicted queuosine-regulated ECF transporter
*
Streptococcus gallolyticus UCN34

Site:
position = -115
score = 72.39
sequence = GTGCTATACTTTTAA...

Gene: GALLO_0778: Substrate-specific component QueT (COG4708) of predicted queuosine-regulated ECF transporter
*
Streptococcus dysgalactiae subsp. equisimilis GGS_124

Site:
position = -116
score = 82.68
sequence = GTGGTACAATGTAAC...

Gene: SDEG_0715: Substrate-specific component QueT (COG4708) of predicted queuosine-regulated ECF transporter
*
Streptococcus suis 05ZYH33

Site:
position = -101
score = 68.23
sequence = ATATGCTATACTAAT...

Gene: SSU05_1614: Substrate-specific component QueT (COG4708) of predicted queuosine-regulated ECF transporter
*
Lactococcus lactis subsp. lactis Il1403

Site:
position = -39
score = 86.81
sequence = CTGCTAAAATAAAAA...

Gene: L2611: Substrate-specific component QueT (COG4708) of predicted queuosine-regulated ECF transporter
*
Lactococcus lactis subsp. cremoris SK11

Site:
position = -103
score = 80.15
sequence = CTGTTAAAATAAAAA...

Gene: LACR_0847: Substrate-specific component QueT (COG4708) of predicted queuosine-regulated ECF transporter
*
Streptococcus uberis 0140J

Site:
position = -113
score = 83.22
sequence = ATGCTACAATAATAA...

Gene: SUB0657: Substrate-specific component QueT (COG4708) of predicted queuosine-regulated ECF transporter
*
Streptococcus agalactiae 2603V/R

Site:
position = -110
score = 87.45
sequence = GTGATATACTTAGTA...

Gene: SAG0849: Substrate-specific component QueT (COG4708) of predicted queuosine-regulated ECF transporter
*
Streptococcus sanguinis SK36

Site:
position = -105
score = 80.47
sequence = GTGGGGGAATCAACT...

Gene: SSA_1485: Substrate-specific component QueT (COG4708) of predicted queuosine-regulated ECF transporter
*
Streptococcus pyogenes M1 GAS

Site:
position = -112
score = 88.97
sequence = ATGGTACAATGTAAC...

Gene: SPy0749: Substrate-specific component QueT (COG4708) of predicted queuosine-regulated ECF transporter
*
Streptococcus mutans UA159

Site:
position = -95
score = 95.43
sequence = ATATGCTATACTGGA...

Gene: SMU.1545c: Substrate-specific component QueT (COG4708) of predicted queuosine-regulated ECF transporter
 
Streptococcus thermophilus CNRZ1066

Gene: str1555: Substrate-specific component QueT (COG4708) of predicted queuosine-regulated ECF transporter
*
Streptococcus gordonii str. Challis substr. CH1

Site:
position = -133
score = 74.97
sequence = TTATGCTATACTAGT...

Gene: SGO_1391: Substrate-specific component QueT (COG4708) of predicted queuosine-regulated ECF transporter
*
Streptococcus equi subsp. zooepidemicus MGCS10565

Site:
position = -115
score = 76.96
sequence = ATGGTACAATGTAGG...

Gene: Sez_0783: Substrate-specific component QueT (COG4708) of predicted queuosine-regulated ECF transporter
*
Streptococcus mitis B6

Site:
position = -95
score = 95.83
sequence = TTGTGCTATACTAGT...

Gene: smi_1135: Substrate-specific component QueT (COG4708) of predicted queuosine-regulated ECF transporter
Substrate-specific component QueT (COG4708) of predicted queuosine-regulated ECF transporter
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD