Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog glmS - Lactobacillaceae

Properties
Regulator type: RNA regulatory element
Name: glmS
RFAM: RF00234
Regulation mode:
Biological process: Amino sugar metabolism
Effector: Glucosamine-6-phosphate
Phylum: Firmicutes
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Oenococcus oeni PSU-1
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293
Pediococcus pentosaceus ATCC 25745
Lactobacillus sakei subsp. sakei 23K
Lactobacillus brevis ATCC 367
Lactobacillus casei ATCC 334
Lactobacillus plantarum WCFS1 1 1
Lactobacillus johnsonii NCC 533
Lactobacillus acidophilus NCFM
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365
Lactobacillus salivarius subsp. salivarius UCC118
Lactobacillus fermentum IFO 3956
Lactobacillus helveticus DPC 4571
Lactobacillus reuteri JCM 1112
Lactobacillus rhamnosus GG
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
glmS
 
Oenococcus oeni PSU-1

Gene: OEOE_0635: Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16)
 
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293

Gene: LEUM_0684: Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16)
 
Pediococcus pentosaceus ATCC 25745

Gene: PEPE_0478: Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16)
 
Lactobacillus sakei subsp. sakei 23K

Gene: LSA1355: Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16)
 
Lactobacillus brevis ATCC 367

Gene: LVIS_0687: Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16)
 
Lactobacillus casei ATCC 334

Gene: LSEI_1019: Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16)
*
Lactobacillus plantarum WCFS1

Site:
position = -183
score = 94.0
sequence = AAAGCGGAATAGCGC...

Gene: lp_0822: Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16)
 
Lactobacillus johnsonii NCC 533

Gene: LJ1581: Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16)
 
Lactobacillus acidophilus NCFM

Gene: LBA0462: Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16)
 
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365

Gene: LBUL_0440: Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16)
 
Lactobacillus salivarius subsp. salivarius UCC118

Gene: LSL_1627: Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16)
 
Lactobacillus fermentum IFO 3956

Gene: LAF_0382: Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16)
 
Lactobacillus helveticus DPC 4571

Gene: lhv_0491: Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16)
 
Lactobacillus reuteri JCM 1112

Gene: LAR_0405: Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16)
 
Lactobacillus rhamnosus GG

Gene: LGG_00983: Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16)
Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16)
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD