Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog Rex - Deinococcus-Thermus

Properties
Regulator type: Transcription factor
Regulator family: Rex
Regulation mode: repressor
Biological process: Energy metabolism
Effector: NADH
Phylum: Deinococcus-Thermus
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 10 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Deinococcus deserti VCD115 17 3
Deinococcus geothermalis DSM 11300 17 3
Deinococcus radiodurans R1 16 2
Thermus aquaticus Y51MC23 13 1
Thermus thermophilus HB27 13 1
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
nadC
*
Deinococcus deserti VCD115

Site:
position = -37
score = 5.35652
sequence = GCGTGATTTCTCTCACAA

Gene: Deide_13560: Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19)
*
Deinococcus geothermalis DSM 11300

Site:
position = -46
score = 5.41994
sequence = ACGTGATTTCGTTCACGA

Gene: Dgeo_1163: Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19)
 
Deinococcus radiodurans R1
 
Thermus aquaticus Y51MC23

Gene: TaqDRAFT_5291: Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19)
 
Thermus thermophilus HB27

Gene: TTC0621: Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19)
Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19)
nadA
 
Deinococcus deserti VCD115

Gene: Deide_13570: Quinolinate synthetase (EC 4.1.99.-)
 
Deinococcus geothermalis DSM 11300

Gene: Dgeo_1164: Quinolinate synthetase (EC 4.1.99.-)
 
Deinococcus radiodurans R1
 
Thermus aquaticus Y51MC23

Gene: TaqDRAFT_5288: Quinolinate synthetase (EC 4.1.99.-)
 
Thermus thermophilus HB27

Gene: TTC0620: Quinolinate synthetase (EC 4.1.99.-)
Quinolinate synthetase (EC 4.1.99.-)
 
CRON 2.
nuoA
*
Deinococcus deserti VCD115

Site:
position = -87
score = 5.18375
sequence = TCGTGCGGTTTTTCACGT

Gene: Deide_05090: NADH ubiquinone oxidoreductase chain A (EC 1.6.5.3)
*
Deinococcus geothermalis DSM 11300

Site:
position = -83
score = 5.56036
sequence = TCGTGCGTTTTTTCACGA

Gene: Dgeo_0909: NADH ubiquinone oxidoreductase chain A (EC 1.6.5.3)
*
Deinococcus radiodurans R1

Site:
position = 56
score = 4.69162
sequence = TCGTGCCTCTTTTCACGA

Gene: DR1506: NADH ubiquinone oxidoreductase chain A (EC 1.6.5.3)
*
Thermus aquaticus Y51MC23

Site:
position = -30
score = 5.01871
sequence = TCGTGAAGAGAGGCACGA

Gene: TaqDRAFT_4255: NADH ubiquinone oxidoreductase chain A (EC 1.6.5.3)
*
Thermus thermophilus HB27

Site:
position = -30
score = 5.01871
sequence = TCGTGAAGAAAGGCACGA

Gene: TTC1920: NADH ubiquinone oxidoreductase chain A (EC 1.6.5.3)
NADH ubiquinone oxidoreductase chain A (EC 1.6.5.3)
nuoB
 
Deinococcus deserti VCD115

Gene: Deide_05100: NADH-ubiquinone oxidoreductase chain B (EC 1.6.5.3)
 
Deinococcus geothermalis DSM 11300

Gene: Dgeo_0910: NADH-ubiquinone oxidoreductase chain B (EC 1.6.5.3)
 
Deinococcus radiodurans R1

Gene: DR1505: NADH-ubiquinone oxidoreductase chain B (EC 1.6.5.3)
 
Thermus aquaticus Y51MC23

Gene: TaqDRAFT_4256: NADH-ubiquinone oxidoreductase chain B (EC 1.6.5.3)
 
Thermus thermophilus HB27

Gene: TTC1919: NADH-ubiquinone oxidoreductase chain B (EC 1.6.5.3)
NADH-ubiquinone oxidoreductase chain B (EC 1.6.5.3)
nuoC
 
Deinococcus deserti VCD115

Gene: Deide_05110: NADH-ubiquinone oxidoreductase chain C (EC 1.6.5.3)
 
Deinococcus geothermalis DSM 11300

Gene: Dgeo_0911: NADH-ubiquinone oxidoreductase chain C (EC 1.6.5.3)
 
Deinococcus radiodurans R1

Gene: DR1504: NADH-ubiquinone oxidoreductase chain C (EC 1.6.5.3)
 
Thermus aquaticus Y51MC23

Gene: TaqDRAFT_4257: NADH-ubiquinone oxidoreductase chain C (EC 1.6.5.3)
 
Thermus thermophilus HB27

Gene: TTC1918: NADH-ubiquinone oxidoreductase chain C (EC 1.6.5.3)
NADH-ubiquinone oxidoreductase chain C (EC 1.6.5.3)
nuoD
 
Deinococcus deserti VCD115

Gene: Deide_05120: NADH-ubiquinone oxidoreductase chain D (EC 1.6.5.3)
 
Deinococcus geothermalis DSM 11300

Gene: Dgeo_0912: NADH-ubiquinone oxidoreductase chain D (EC 1.6.5.3)
 
Deinococcus radiodurans R1

Gene: DR1503: NADH-ubiquinone oxidoreductase chain D (EC 1.6.5.3)
 
Thermus aquaticus Y51MC23

Gene: TaqDRAFT_4258: NADH-ubiquinone oxidoreductase chain D (EC 1.6.5.3)
 
Thermus thermophilus HB27

Gene: TTC1917: NADH-ubiquinone oxidoreductase chain D (EC 1.6.5.3)
NADH-ubiquinone oxidoreductase chain D (EC 1.6.5.3)
DR1502
 
Deinococcus deserti VCD115
 
Deinococcus geothermalis DSM 11300
 
Deinococcus radiodurans R1

Gene: DR1502: hypothetical protein
 
Thermus aquaticus Y51MC23
 
Thermus thermophilus HB27
hypothetical protein
nuoE
 
Deinococcus deserti VCD115

Gene: Deide_05130: NADH-ubiquinone oxidoreductase chain E (EC 1.6.5.3)
 
Deinococcus geothermalis DSM 11300

Gene: Dgeo_0913: NADH-ubiquinone oxidoreductase chain E (EC 1.6.5.3)
 
Deinococcus radiodurans R1

Gene: DR1501: NADH-ubiquinone oxidoreductase chain E (EC 1.6.5.3)
 
Thermus aquaticus Y51MC23

Gene: TaqDRAFT_4259: NADH-ubiquinone oxidoreductase chain E (EC 1.6.5.3)
 
Thermus thermophilus HB27

Gene: TTC1916: NADH-ubiquinone oxidoreductase chain E (EC 1.6.5.3)
NADH-ubiquinone oxidoreductase chain E (EC 1.6.5.3)
nuoF
 
Deinococcus deserti VCD115

Gene: Deide_05140: NADH-ubiquinone oxidoreductase chain F (EC 1.6.5.3)
 
Deinococcus geothermalis DSM 11300

Gene: Dgeo_0914: NADH-ubiquinone oxidoreductase chain F (EC 1.6.5.3)
 
Deinococcus radiodurans R1

Gene: DR1500: NADH-ubiquinone oxidoreductase chain F (EC 1.6.5.3)
 
Thermus aquaticus Y51MC23

Gene: TaqDRAFT_4260: NADH-ubiquinone oxidoreductase chain F (EC 1.6.5.3)
 
Thermus thermophilus HB27

Gene: TTC1915: NADH-ubiquinone oxidoreductase chain F (EC 1.6.5.3)
NADH-ubiquinone oxidoreductase chain F (EC 1.6.5.3)
nuoG
 
Deinococcus deserti VCD115

Gene: Deide_05150: NADH-ubiquinone oxidoreductase chain G (EC 1.6.5.3)
 
Deinococcus geothermalis DSM 11300

Gene: Dgeo_0915: NADH-ubiquinone oxidoreductase chain G (EC 1.6.5.3)
 
Deinococcus radiodurans R1

Gene: DR1499: NADH-ubiquinone oxidoreductase chain G (EC 1.6.5.3)
 
Thermus aquaticus Y51MC23

Gene: TaqDRAFT_4261: NADH-ubiquinone oxidoreductase chain G (EC 1.6.5.3)
 
Thermus thermophilus HB27

Gene: TTC1914: NADH-ubiquinone oxidoreductase chain G (EC 1.6.5.3)
NADH-ubiquinone oxidoreductase chain G (EC 1.6.5.3)
nuoH
 
Deinococcus deserti VCD115

Gene: Deide_05160: NADH-ubiquinone oxidoreductase chain H (EC 1.6.5.3)
 
Deinococcus geothermalis DSM 11300

Gene: Dgeo_0916: NADH-ubiquinone oxidoreductase chain H (EC 1.6.5.3)
 
Deinococcus radiodurans R1

Gene: DR1498: NADH-ubiquinone oxidoreductase chain H (EC 1.6.5.3)
 
Thermus aquaticus Y51MC23

Gene: TaqDRAFT_4262: NADH-ubiquinone oxidoreductase chain H (EC 1.6.5.3)
 
Thermus thermophilus HB27

Gene: TTC1913: NADH-ubiquinone oxidoreductase chain H (EC 1.6.5.3)
NADH-ubiquinone oxidoreductase chain H (EC 1.6.5.3)
nuoI
 
Deinococcus deserti VCD115

Gene: Deide_05170: NADH-ubiquinone oxidoreductase chain I (EC 1.6.5.3)
 
Deinococcus geothermalis DSM 11300

Gene: Dgeo_0917: NADH-ubiquinone oxidoreductase chain I (EC 1.6.5.3)
 
Deinococcus radiodurans R1

Gene: DR1497: NADH-ubiquinone oxidoreductase chain I (EC 1.6.5.3)
 
Thermus aquaticus Y51MC23

Gene: TaqDRAFT_4263: NADH-ubiquinone oxidoreductase chain I (EC 1.6.5.3)
 
Thermus thermophilus HB27

Gene: TTC1912: NADH-ubiquinone oxidoreductase chain I (EC 1.6.5.3)
NADH-ubiquinone oxidoreductase chain I (EC 1.6.5.3)
nuoJ
 
Deinococcus deserti VCD115

Gene: Deide_05180: NADH-ubiquinone oxidoreductase chain J (EC 1.6.5.3)
 
Deinococcus geothermalis DSM 11300

Gene: Dgeo_0918: NADH-ubiquinone oxidoreductase chain J (EC 1.6.5.3)
 
Deinococcus radiodurans R1

Gene: DR1496: NADH-ubiquinone oxidoreductase chain J (EC 1.6.5.3)
 
Thermus aquaticus Y51MC23

Gene: TaqDRAFT_4264: NADH-ubiquinone oxidoreductase chain J (EC 1.6.5.3)
 
Thermus thermophilus HB27

Gene: TTC1911: NADH-ubiquinone oxidoreductase chain J (EC 1.6.5.3)
NADH-ubiquinone oxidoreductase chain J (EC 1.6.5.3)
nuoK
 
Deinococcus deserti VCD115

Gene: Deide_05190: NADH-ubiquinone oxidoreductase chain K (EC 1.6.5.3)
 
Deinococcus geothermalis DSM 11300

Gene: Dgeo_0919: NADH-ubiquinone oxidoreductase chain K (EC 1.6.5.3)
 
Deinococcus radiodurans R1

Gene: DR1495: NADH-ubiquinone oxidoreductase chain K (EC 1.6.5.3)
 
Thermus aquaticus Y51MC23

Gene: TaqDRAFT_4265: NADH-ubiquinone oxidoreductase chain K (EC 1.6.5.3)
 
Thermus thermophilus HB27

Gene: TTC1910: NADH-ubiquinone oxidoreductase chain K (EC 1.6.5.3)
NADH-ubiquinone oxidoreductase chain K (EC 1.6.5.3)
nuoL
 
Deinococcus deserti VCD115

Gene: Deide_05200: NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3)
 
Deinococcus geothermalis DSM 11300

Gene: Dgeo_0920: NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3)
 
Deinococcus radiodurans R1

Gene: DR1494: NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3)
 
Thermus aquaticus Y51MC23

Gene: TaqDRAFT_4266: NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3)
 
Thermus thermophilus HB27

Gene: TTC1909: NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3)
NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3)
nuoM
 
Deinococcus deserti VCD115

Gene: Deide_05210: NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3)
 
Deinococcus geothermalis DSM 11300

Gene: Dgeo_0921: NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3)
 
Deinococcus radiodurans R1

Gene: DR1493: NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3)
 
Thermus aquaticus Y51MC23

Gene: TaqDRAFT_4267: NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3)
 
Thermus thermophilus HB27

Gene: TTC1908: NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3)
NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3)
nuoN
 
Deinococcus deserti VCD115

Gene: Deide_05220: NADH-ubiquinone oxidoreductase chain N (EC 1.6.5.3)
 
Deinococcus geothermalis DSM 11300

Gene: Dgeo_0922: NADH-ubiquinone oxidoreductase chain N (EC 1.6.5.3)
 
Deinococcus radiodurans R1

Gene: DR1492: NADH-ubiquinone oxidoreductase chain N (EC 1.6.5.3)
 
Thermus aquaticus Y51MC23
 
Thermus thermophilus HB27
NADH-ubiquinone oxidoreductase chain N (EC 1.6.5.3)
 
CRON 3.
ndh
*
Deinococcus deserti VCD115

Site:
position = -29
score = 5.81968
sequence = TCGTGAATTCGTTCACAG

Gene: Deide_06790: NADH dehydrogenase (EC 1.6.99.3)
*
Deinococcus geothermalis DSM 11300

Site:
position = -28
score = 5.71423
sequence = TCGTGAATTCCTTCACAG

Gene: Dgeo_1949: NADH dehydrogenase (EC 1.6.99.3)
*
Deinococcus radiodurans R1

Site:
position = -29
score = 5.90616
sequence = TCGTGAATACTTTCACAG

Gene: DR0950: NADH dehydrogenase (EC 1.6.99.3)
 
Thermus aquaticus Y51MC23
 
Thermus thermophilus HB27
NADH dehydrogenase (EC 1.6.99.3)
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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