Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog PreQ1 - Streptococcaceae

Properties
Regulator type: RNA regulatory element
Name: PreQ1
RFAM: RF00522
Regulation mode:
Biological process: Queuosine biosynthesis
Effector: Pre-queuosine1
Phylum: Firmicutes
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Streptococcus pneumoniae TIGR4
Streptococcus equi subsp. zooepidemicus MGCS10565
Streptococcus gordonii str. Challis substr. CH1
Streptococcus thermophilus CNRZ1066
Streptococcus mutans UA159
Streptococcus pyogenes M1 GAS
Streptococcus sanguinis SK36
Streptococcus agalactiae 2603V/R 2 1
Streptococcus uberis 0140J
Lactococcus lactis subsp. cremoris SK11
Lactococcus lactis subsp. lactis Il1403
Streptococcus suis 05ZYH33
Streptococcus dysgalactiae subsp. equisimilis GGS_124 2 1
Streptococcus gallolyticus UCN34
Streptococcus mitis B6
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
iunH
 
Streptococcus pneumoniae TIGR4
 
Streptococcus equi subsp. zooepidemicus MGCS10565
 
Streptococcus gordonii str. Challis substr. CH1
 
Streptococcus thermophilus CNRZ1066
 
Streptococcus mutans UA159
 
Streptococcus pyogenes M1 GAS
 
Streptococcus sanguinis SK36
*
Streptococcus agalactiae 2603V/R

Site:
position = -189
score = 46.36
sequence = TCTCGGACTGGTTCG...

Gene: SAG0528: preQ1-regulated inosine-uridine nucleoside hydrolase (EC 3.2.2.1)
 
Streptococcus uberis 0140J
 
Lactococcus lactis subsp. cremoris SK11
 
Lactococcus lactis subsp. lactis Il1403
 
Streptococcus suis 05ZYH33
*
Streptococcus dysgalactiae subsp. equisimilis GGS_124

Site:
position = -227
score = 48.3
sequence = TCCTGGACTGGTTCG...

Gene: SDEG_0227: preQ1-regulated inosine-uridine nucleoside hydrolase (EC 3.2.2.1)
 
Streptococcus gallolyticus UCN34
 
Streptococcus mitis B6
preQ1-regulated inosine-uridine nucleoside hydrolase (EC 3.2.2.1)
qrtT
 
Streptococcus pneumoniae TIGR4
 
Streptococcus equi subsp. zooepidemicus MGCS10565
 
Streptococcus gordonii str. Challis substr. CH1
 
Streptococcus thermophilus CNRZ1066
 
Streptococcus mutans UA159
 
Streptococcus pyogenes M1 GAS
 
Streptococcus sanguinis SK36
 
Streptococcus agalactiae 2603V/R

Gene: SAG0527: Substrate-specific component STY3230 of queuosine-regulated ECF transporter
 
Streptococcus uberis 0140J
 
Lactococcus lactis subsp. cremoris SK11
 
Lactococcus lactis subsp. lactis Il1403
 
Streptococcus suis 05ZYH33
 
Streptococcus dysgalactiae subsp. equisimilis GGS_124

Gene: SDEG_0226: Substrate-specific component STY3230 of queuosine-regulated ECF transporter
 
Streptococcus gallolyticus UCN34
 
Streptococcus mitis B6
Substrate-specific component STY3230 of queuosine-regulated ECF transporter
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD