Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog L21_leader - Streptococcaceae

Properties
Regulator type: RNA regulatory element
Name: L21_leader
RFAM: RF00559
Regulation mode:
Biological process: Ribosome biogenesis
Effector:
Phylum: Firmicutes
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Streptococcus pneumoniae TIGR4 3 1
Streptococcus equi subsp. zooepidemicus MGCS10565 3 1
Streptococcus gordonii str. Challis substr. CH1 3 1
Streptococcus thermophilus CNRZ1066 2 1
Streptococcus mutans UA159 2 1
Streptococcus pyogenes M1 GAS 3 1
Streptococcus sanguinis SK36 1 1
Streptococcus agalactiae 2603V/R 3 1
Streptococcus uberis 0140J 3 1
Lactococcus lactis subsp. cremoris SK11 3 1
Lactococcus lactis subsp. lactis Il1403 3 1
Streptococcus suis 05ZYH33 2 1
Streptococcus dysgalactiae subsp. equisimilis GGS_124 1 1
Streptococcus gallolyticus UCN34 3 1
Streptococcus mitis B6 3 1
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
rplU
*
Streptococcus pneumoniae TIGR4

Site:
position = -122
score = 43.26
sequence = ATCCTGTGCAACCGC...

Gene: SP_1105: LSU ribosomal protein L21p
*
Streptococcus equi subsp. zooepidemicus MGCS10565

Site:
position = -109
score = 53.22
sequence = ACGTCCTGTGCAACC...

Gene: Sez_1135: LSU ribosomal protein L21p
*
Streptococcus gordonii str. Challis substr. CH1

Site:
position = -124
score = 41.51
sequence = TTCCTGTGCAACCGC...

Gene: SGO_0818: LSU ribosomal protein L21p
*
Streptococcus thermophilus CNRZ1066

Site:
position = -116
score = 47.4
sequence = GTCCTGTGCAACCGC...

Gene: str0417: LSU ribosomal protein L21p
*
Streptococcus mutans UA159

Site:
position = -109
score = 52.64
sequence = ATCCTGTGCAACCGC...

Gene: SMU.846: LSU ribosomal protein L21p
*
Streptococcus pyogenes M1 GAS

Site:
position = -108
score = 50.13
sequence = ATCCTGTGCAACCGC...

Gene: SPy0819: LSU ribosomal protein L21p
*
Streptococcus sanguinis SK36

Site:
position = -121
score = 40.95
sequence = TTCCTGTGCAACCGC...

Gene: SSA_1061: LSU ribosomal protein L21p
*
Streptococcus agalactiae 2603V/R

Site:
position = -115
score = 48.27
sequence = ACATCCTGTGCAACC...

Gene: SAG1370: LSU ribosomal protein L21p
*
Streptococcus uberis 0140J

Site:
position = -104
score = 49.52
sequence = ATCCTGTGCAACCGC...

Gene: SUB0725: LSU ribosomal protein L21p
*
Lactococcus lactis subsp. cremoris SK11

Site:
position = -112
score = 42.71
sequence = ATAAAGTGCAACCGC...

Gene: LACR_1180: LSU ribosomal protein L21p
*
Lactococcus lactis subsp. lactis Il1403

Site:
position = -112
score = 43.03
sequence = ATAAAGTGCAACCGC...

Gene: L0417: LSU ribosomal protein L21p
*
Streptococcus suis 05ZYH33

Site:
position = -48
score = 42.64
sequence = ATCCTGTGCAACCGC...

Gene: SSU05_0781: LSU ribosomal protein L21p
*
Streptococcus dysgalactiae subsp. equisimilis GGS_124

Site:
position = -108
score = 52.03
sequence = ATCCTGTGCAACCGC...

Gene: SDEG_0786: LSU ribosomal protein L21p
*
Streptococcus gallolyticus UCN34

Site:
position = -111
score = 51.78
sequence = ACATCCTGTGCAACC...

Gene: GALLO_1343: LSU ribosomal protein L21p
*
Streptococcus mitis B6

Site:
position = -123
score = 43.26
sequence = ATCCTGTGCAACCGC...

Gene: smi_0926: LSU ribosomal protein L21p
LSU ribosomal protein L21p
ysxB
 
Streptococcus pneumoniae TIGR4

Gene: SP_1106: FIG139598: Potential ribosomal protein
 
Streptococcus equi subsp. zooepidemicus MGCS10565

Gene: Sez_1134: FIG139598: Potential ribosomal protein
 
Streptococcus gordonii str. Challis substr. CH1

Gene: SGO_0819: FIG139598: Potential ribosomal protein
 
Streptococcus thermophilus CNRZ1066
 
Streptococcus mutans UA159

Gene: SMU.848: FIG139598: Potential ribosomal protein
 
Streptococcus pyogenes M1 GAS

Gene: SPy0821: FIG139598: Potential ribosomal protein
 
Streptococcus sanguinis SK36
 
Streptococcus agalactiae 2603V/R

Gene: SAG1369: FIG139598: Potential ribosomal protein
 
Streptococcus uberis 0140J

Gene: SUB0726: hypothetical protein
 
Lactococcus lactis subsp. cremoris SK11

Gene: LACR_1181: FIG139598: Potential ribosomal protein
 
Lactococcus lactis subsp. lactis Il1403

Gene: L90693: FIG139598: Potential ribosomal protein
 
Streptococcus suis 05ZYH33
 
Streptococcus dysgalactiae subsp. equisimilis GGS_124

Gene: SDEG_0787: hypothetical ribosome-associated protein
 
Streptococcus gallolyticus UCN34

Gene: GALLO_1342: putative ribosome-associated protein
 
Streptococcus mitis B6

Gene: smi_0927: hypothetical protein
FIG139598: Potential ribosomal protein
rpmA
 
Streptococcus pneumoniae TIGR4

Gene: SP_1107: LSU ribosomal protein L27p
 
Streptococcus equi subsp. zooepidemicus MGCS10565

Gene: Sez_1133: LSU ribosomal protein L27p
 
Streptococcus gordonii str. Challis substr. CH1

Gene: SGO_0820: LSU ribosomal protein L27p
 
Streptococcus thermophilus CNRZ1066

Gene: str0418: LSU ribosomal protein L27p
 
Streptococcus mutans UA159

Gene: SMU.849: LSU ribosomal protein L27p
 
Streptococcus pyogenes M1 GAS

Gene: SPy0822: LSU ribosomal protein L27p
 
Streptococcus sanguinis SK36

Gene: SSA_1062: LSU ribosomal protein L27p
 
Streptococcus agalactiae 2603V/R

Gene: SAG1368: LSU ribosomal protein L27p
 
Streptococcus uberis 0140J

Gene: SUB0727: LSU ribosomal protein L27p
 
Lactococcus lactis subsp. cremoris SK11

Gene: LACR_1182: LSU ribosomal protein L27p
 
Lactococcus lactis subsp. lactis Il1403

Gene: L0421: LSU ribosomal protein L27p
 
Streptococcus suis 05ZYH33

Gene: SSU05_0782: LSU ribosomal protein L27p
 
Streptococcus dysgalactiae subsp. equisimilis GGS_124

Gene: SDEG_0788: LSU ribosomal protein L27p
 
Streptococcus gallolyticus UCN34

Gene: GALLO_1341: LSU ribosomal protein L27p
 
Streptococcus mitis B6

Gene: smi_0928: LSU ribosomal protein L27p
LSU ribosomal protein L27p
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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