Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog L20_leader - Streptococcaceae

Properties
Regulator type: RNA regulatory element
Name: L20_leader
RFAM: RF00558
Regulation mode:
Biological process: Ribosome biogenesis
Effector:
Phylum: Firmicutes
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Streptococcus pneumoniae TIGR4 3 1
Streptococcus equi subsp. zooepidemicus MGCS10565 3 1
Streptococcus gordonii str. Challis substr. CH1 3 1
Streptococcus thermophilus CNRZ1066 3 1
Streptococcus mutans UA159 3 1
Streptococcus pyogenes M1 GAS 3 1
Streptococcus sanguinis SK36 3 1
Streptococcus agalactiae 2603V/R 3 1
Streptococcus uberis 0140J 3 1
Lactococcus lactis subsp. cremoris SK11 3 1
Lactococcus lactis subsp. lactis Il1403 3 1
Streptococcus suis 05ZYH33 3 1
Streptococcus dysgalactiae subsp. equisimilis GGS_124 3 1
Streptococcus gallolyticus UCN34 3 1
Streptococcus mitis B6 3 1
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
infC
*
Streptococcus pneumoniae TIGR4

Site:
position = -119
score = 71.82
sequence = GAGAAAAGCAGAAGT...

Gene: SP_0959: Translation initiation factor 3
*
Streptococcus equi subsp. zooepidemicus MGCS10565

Site:
position = -136
score = 72.03
sequence = GAGAAAAGCAGAAGT...

Gene: Sez_0857: Translation initiation factor 3
*
Streptococcus gordonii str. Challis substr. CH1

Site:
position = -244
score = 76.9
sequence = GAGAAAAGCAGAAGT...

Gene: SGO_1032: Translation initiation factor 3
*
Streptococcus thermophilus CNRZ1066

Site:
position = -137
score = 77.32
sequence = ATGAGAAAAGCAGAA...

Gene: str1134: Translation initiation factor 3
*
Streptococcus mutans UA159

Site:
position = -142
score = 77.57
sequence = GAGAAAAGCAGAAGT...

Gene: SMU.697: Translation initiation factor 3
*
Streptococcus pyogenes M1 GAS

Site:
position = -137
score = 77.82
sequence = GAGAAAAGTAGAAGT...

Gene: SPy0804: Translation initiation factor 3
*
Streptococcus sanguinis SK36

Site:
position = -148
score = 75.97
sequence = TTGAGAAAAGCAGAA...

Gene: SSA_1500: Translation initiation factor 3
*
Streptococcus agalactiae 2603V/R

Site:
position = -141
score = 83.74
sequence = ATGAGAAAAGCAGAA...

Gene: SAG1384: Translation initiation factor 3
*
Streptococcus uberis 0140J

Site:
position = -138
score = 79.79
sequence = GAGAAAAGTAGAAGT...

Gene: SUB0711: Translation initiation factor 3
*
Lactococcus lactis subsp. cremoris SK11

Site:
position = -58
score = 81.67
sequence = AGTTGAAAAGCAGAA...

Gene: LACR_2033: Translation initiation factor 3
*
Lactococcus lactis subsp. lactis Il1403

Site:
position = -213
score = 80.31
sequence = AGTTGAAAAGCAGAA...

Gene: L95240: Translation initiation factor 3
*
Streptococcus suis 05ZYH33

Site:
position = -170
score = 66.7
sequence = TTGAGAAAAGCAGAA...

Gene: SSU05_1270: Translation initiation factor 3
*
Streptococcus dysgalactiae subsp. equisimilis GGS_124

Site:
position = -137
score = 77.6
sequence = GAGAAAAGCAGAAGT...

Gene: SDEG_0770: Translation initiation factor 3
*
Streptococcus gallolyticus UCN34

Site:
position = -143
score = 74.07
sequence = ATGAGAAAAGCAGAA...

Gene: GALLO_1361: Translation initiation factor 3
*
Streptococcus mitis B6

Site:
position = -119
score = 66.63
sequence = GAGAAAAGCAGAAGT...

Gene: smi_0959: Translation initiation factor 3
Translation initiation factor 3
rpmI
 
Streptococcus pneumoniae TIGR4

Gene: SP_0960: LSU ribosomal protein L35p
 
Streptococcus equi subsp. zooepidemicus MGCS10565

Gene: Sez_0858: LSU ribosomal protein L35p
 
Streptococcus gordonii str. Challis substr. CH1

Gene: SGO_1033: LSU ribosomal protein L35p
 
Streptococcus thermophilus CNRZ1066

Gene: str1133: LSU ribosomal protein L35p
 
Streptococcus mutans UA159

Gene: SMU.698: LSU ribosomal protein L35p
 
Streptococcus pyogenes M1 GAS

Gene: SPy0805: LSU ribosomal protein L35p
 
Streptococcus sanguinis SK36

Gene: SSA_1499: LSU ribosomal protein L35p
 
Streptococcus agalactiae 2603V/R

Gene: SAG1383: LSU ribosomal protein L35p
 
Streptococcus uberis 0140J

Gene: SUB0712: LSU ribosomal protein L35p
 
Lactococcus lactis subsp. cremoris SK11

Gene: LACR_2032: LSU ribosomal protein L35p
 
Lactococcus lactis subsp. lactis Il1403

Gene: L0430: LSU ribosomal protein L35p
 
Streptococcus suis 05ZYH33

Gene: SSU05_1269: LSU ribosomal protein L35p
 
Streptococcus dysgalactiae subsp. equisimilis GGS_124

Gene: SDEG_0771: LSU ribosomal protein L35p
 
Streptococcus gallolyticus UCN34

Gene: GALLO_1360: LSU ribosomal protein L35p
 
Streptococcus mitis B6

Gene: smi_0960: LSU ribosomal protein L35p
LSU ribosomal protein L35p
rplT
 
Streptococcus pneumoniae TIGR4

Gene: SP_0961: LSU ribosomal protein L20p
 
Streptococcus equi subsp. zooepidemicus MGCS10565

Gene: Sez_0859: LSU ribosomal protein L20p
 
Streptococcus gordonii str. Challis substr. CH1

Gene: SGO_1034: LSU ribosomal protein L20p
 
Streptococcus thermophilus CNRZ1066

Gene: str1132: LSU ribosomal protein L20p
 
Streptococcus mutans UA159

Gene: SMU.699: LSU ribosomal protein L20p
 
Streptococcus pyogenes M1 GAS

Gene: SPy0806: LSU ribosomal protein L20p
 
Streptococcus sanguinis SK36

Gene: SSA_1498: LSU ribosomal protein L20p
 
Streptococcus agalactiae 2603V/R

Gene: SAG1382: LSU ribosomal protein L20p
 
Streptococcus uberis 0140J

Gene: SUB0713: LSU ribosomal protein L20p
 
Lactococcus lactis subsp. cremoris SK11

Gene: LACR_2031: LSU ribosomal protein L20p
 
Lactococcus lactis subsp. lactis Il1403

Gene: L0416: LSU ribosomal protein L20p
 
Streptococcus suis 05ZYH33

Gene: SSU05_1268: LSU ribosomal protein L20p
 
Streptococcus dysgalactiae subsp. equisimilis GGS_124

Gene: SDEG_0772: LSU ribosomal protein L20p
 
Streptococcus gallolyticus UCN34

Gene: GALLO_1359: LSU ribosomal protein L20p
 
Streptococcus mitis B6

Gene: smi_0961: LSU ribosomal protein L20p
LSU ribosomal protein L20p
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD