Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog L19_leader - Streptococcaceae

Properties
Regulator type: RNA regulatory element
Name: L19_leader
RFAM: RF00556
Regulation mode:
Biological process: Ribosome biogenesis
Effector:
Phylum: Firmicutes
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Streptococcus pneumoniae TIGR4 1 1
Streptococcus gallolyticus UCN34 1 1
Streptococcus dysgalactiae subsp. equisimilis GGS_124 1 1
Streptococcus suis 05ZYH33 1 1
Lactococcus lactis subsp. lactis Il1403
Lactococcus lactis subsp. cremoris SK11 1 1
Streptococcus uberis 0140J 1 1
Streptococcus agalactiae 2603V/R 1 1
Streptococcus sanguinis SK36 1 1
Streptococcus pyogenes M1 GAS 1 1
Streptococcus mutans UA159 1 1
Streptococcus thermophilus CNRZ1066 1 1
Streptococcus gordonii str. Challis substr. CH1
Streptococcus equi subsp. zooepidemicus MGCS10565 1 1
Streptococcus mitis B6 1 1
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
rplS
*
Streptococcus pneumoniae TIGR4

Site:
position = -54
score = 34.32
sequence = ACAGTTTATCCGCTG...

Gene: SP_1293: LSU ribosomal protein L19p
*
Streptococcus gallolyticus UCN34

Site:
position = -55
score = 21.07
sequence = ACGGCTAATCCGCTG...

Gene: GALLO_1479: LSU ribosomal protein L19p
*
Streptococcus dysgalactiae subsp. equisimilis GGS_124

Site:
position = -51
score = 26.39
sequence = GGCTAATCCGCTAAG...

Gene: SDEG_0696: LSU ribosomal protein L19p
*
Streptococcus suis 05ZYH33

Site:
position = -54
score = 23.61
sequence = AGTTTATCCGCTGGG...

Gene: SSU05_0352: LSU ribosomal protein L19p
 
Lactococcus lactis subsp. lactis Il1403

Gene: L0415: LSU ribosomal protein L19p
*
Lactococcus lactis subsp. cremoris SK11

Site:
position = -60
score = 18.3
sequence = TGTTCATCCGCTGAG...

Gene: LACR_0945: LSU ribosomal protein L19p
*
Streptococcus uberis 0140J

Site:
position = -52
score = 24.29
sequence = GGCTAATCCGCTGGG...

Gene: SUB0644: LSU ribosomal protein L19p
*
Streptococcus agalactiae 2603V/R

Site:
position = -52
score = 28.81
sequence = GGCTAATCCGCTGAG...

Gene: SAG0544: LSU ribosomal protein L19p
*
Streptococcus sanguinis SK36

Site:
position = -20
score = 25.38
sequence = ACGACTAATCCGCTG...

Gene: SSA_1265: LSU ribosomal protein L19p
*
Streptococcus pyogenes M1 GAS

Site:
position = -51
score = 26.39
sequence = GGCTAATCCGCTAAG...

Gene: SPy0724: LSU ribosomal protein L19p
*
Streptococcus mutans UA159

Site:
position = -56
score = 28.78
sequence = ACGGCTAATCCGCTG...

Gene: SMU.1288: LSU ribosomal protein L19p
*
Streptococcus thermophilus CNRZ1066

Site:
position = -62
score = 28.23
sequence = ACGGCTAATCCGCTG...

Gene: str1179: LSU ribosomal protein L19p
 
Streptococcus gordonii str. Challis substr. CH1

Gene: SGO_1383: LSU ribosomal protein L19p
*
Streptococcus equi subsp. zooepidemicus MGCS10565

Site:
position = -53
score = 24.29
sequence = GGCTAATCCGCTAAG...

Gene: Sez_0754: LSU ribosomal protein L19p
*
Streptococcus mitis B6

Site:
position = -54
score = 29.96
sequence = ACAGTTTATCCGCTG...

Gene: smi_1265: LSU ribosomal protein L19p
LSU ribosomal protein L19p
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD