Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog L10_leader - Streptococcaceae

Properties
Regulator type: RNA regulatory element
Name: L10_leader
RFAM: RF00557
Regulation mode:
Biological process: Ribosome biogenesis
Effector:
Phylum: Firmicutes
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Streptococcus pneumoniae TIGR4 2 1
Streptococcus gallolyticus UCN34 2 1
Streptococcus dysgalactiae subsp. equisimilis GGS_124 2 1
Streptococcus suis 05ZYH33 2 1
Lactococcus lactis subsp. lactis Il1403 2 1
Lactococcus lactis subsp. cremoris SK11 2 1
Streptococcus uberis 0140J 2 1
Streptococcus agalactiae 2603V/R 2 1
Streptococcus sanguinis SK36 2 1
Streptococcus pyogenes M1 GAS 2 1
Streptococcus mutans UA159 2 1
Streptococcus thermophilus CNRZ1066 2 1
Streptococcus gordonii str. Challis substr. CH1 2 1
Streptococcus equi subsp. zooepidemicus MGCS10565 2 1
Streptococcus mitis B6 2 1
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
rplJ
*
Streptococcus pneumoniae TIGR4

Site:
position = -175
score = 80.02
sequence = ATACGGTTTAAAAAA...

Gene: SP_1355: LSU ribosomal protein L10p (P0)
*
Streptococcus gallolyticus UCN34

Site:
position = -165
score = 77.97
sequence = GGTTTTGTAATGAAA...

Gene: GALLO_1248: LSU ribosomal protein L10p (P0)
*
Streptococcus dysgalactiae subsp. equisimilis GGS_124

Site:
position = -113
score = 76.56
sequence = GGTTTGATAAAAACT...

Gene: SDEG_0853: LSU ribosomal protein L10p (P0)
*
Streptococcus suis 05ZYH33

Site:
position = -126
score = 74.51
sequence = GGAGGTTTGAAAAAA...

Gene: SSU05_0984: LSU ribosomal protein L10p (P0)
*
Lactococcus lactis subsp. lactis Il1403

Site:
position = -152
score = 81.4
sequence = ACGGTTCTAAAAGAA...

Gene: L0407: LSU ribosomal protein L10p (P0)
*
Lactococcus lactis subsp. cremoris SK11

Site:
position = -152
score = 81.82
sequence = ACGGTTCTAAAAGAA...

Gene: LACR_1387: LSU ribosomal protein L10p (P0)
*
Streptococcus uberis 0140J

Site:
position = -162
score = 80.75
sequence = GTTTTGAAAAAAACT...

Gene: SUB0777: LSU ribosomal protein L10p (P0)
*
Streptococcus agalactiae 2603V/R

Site:
position = -164
score = 78.5
sequence = AAGTTTCTGATGAAA...

Gene: SAG1302: LSU ribosomal protein L10p (P0)
*
Streptococcus sanguinis SK36

Site:
position = -172
score = 79.02
sequence = ATGGTTTGAAAAAAC...

Gene: SSA_1104: LSU ribosomal protein L10p (P0)
*
Streptococcus pyogenes M1 GAS

Site:
position = -164
score = 81.84
sequence = TTTTGATAAAAAACT...

Gene: SPy1072: LSU ribosomal protein L10p (P0)
*
Streptococcus mutans UA159

Site:
position = -162
score = 77.58
sequence = AGGTTTTGAAAAACT...

Gene: SMU.957: LSU ribosomal protein L10p (P0)
*
Streptococcus thermophilus CNRZ1066

Site:
position = -167
score = 74.97
sequence = GGTTTGAAAAAAACT...

Gene: str0536: LSU ribosomal protein L10p (P0)
*
Streptococcus gordonii str. Challis substr. CH1

Site:
position = -175
score = 79.92
sequence = CAATGGTTTGAAAAA...

Gene: SGO_1192: LSU ribosomal protein L10p (P0)
*
Streptococcus equi subsp. zooepidemicus MGCS10565

Site:
position = -165
score = 78.89
sequence = TGGTTTTAAATAAAA...

Gene: Sez_1205: LSU ribosomal protein L10p (P0)
*
Streptococcus mitis B6

Site:
position = -173
score = 77.0
sequence = ACGGTTTGAAAAAAC...

Gene: smi_0783: LSU ribosomal protein L10p (P0)
LSU ribosomal protein L10p (P0)
rplL
 
Streptococcus pneumoniae TIGR4

Gene: SP_1354: LSU ribosomal protein L7/L12 (P1/P2)
 
Streptococcus gallolyticus UCN34

Gene: GALLO_1247: LSU ribosomal protein L7/L12 (P1/P2)
 
Streptococcus dysgalactiae subsp. equisimilis GGS_124

Gene: SDEG_0855: LSU ribosomal protein L7/L12 (P1/P2)
 
Streptococcus suis 05ZYH33

Gene: SSU05_0983: LSU ribosomal protein L7/L12 (P1/P2)
 
Lactococcus lactis subsp. lactis Il1403

Gene: L0405: LSU ribosomal protein L7/L12 (P1/P2)
 
Lactococcus lactis subsp. cremoris SK11

Gene: LACR_1386: LSU ribosomal protein L7/L12 (P1/P2)
 
Streptococcus uberis 0140J

Gene: SUB0778: LSU ribosomal protein L7/L12 (P1/P2)
 
Streptococcus agalactiae 2603V/R

Gene: SAG1301: LSU ribosomal protein L7/L12 (P1/P2)
 
Streptococcus sanguinis SK36

Gene: SSA_1105: LSU ribosomal protein L7/L12 (P1/P2)
 
Streptococcus pyogenes M1 GAS

Gene: SPy1073: LSU ribosomal protein L7/L12 (P1/P2)
 
Streptococcus mutans UA159

Gene: SMU.960: LSU ribosomal protein L7/L12 (P1/P2)
 
Streptococcus thermophilus CNRZ1066

Gene: str0537: LSU ribosomal protein L7/L12 (P1/P2)
 
Streptococcus gordonii str. Challis substr. CH1

Gene: SGO_1191: LSU ribosomal protein L7/L12 (P1/P2)
 
Streptococcus equi subsp. zooepidemicus MGCS10565

Gene: Sez_1204: LSU ribosomal protein L7/L12 (P1/P2)
 
Streptococcus mitis B6

Gene: smi_0784: LSU ribosomal protein L7/L12 (P1/P2)
LSU ribosomal protein L7/L12 (P1/P2)
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD