Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog Rex - Chloroflexia

Properties
Regulator type: Transcription factor
Regulator family: Rex
Regulation mode: repressor
Biological process: Energy metabolism
Effector: NADH
Phylum: Chloroflexi
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 49 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Chloroflexus aggregans DSM 9485 30 11
Chloroflexus sp. Y-400-fl 29 10
Herpetosiphon aurantiacus ATCC 23779 15 4
Roseiflexus castenholzii DSM 13941 28 11
Roseiflexus sp. RS-1 23 10
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
nuoA
*
Chloroflexus aggregans DSM 9485

Site:
position = -55
score = 5.1805
sequence = TTGTGATATACTTCTCAT

Gene: Cagg_1631: NADH ubiquinone oxidoreductase chain A (EC 1.6.5.3)
*
Chloroflexus sp. Y-400-fl

Site:
position = -54
score = 5.1805
sequence = TTGTGATATACTTCTCAT

Gene: Chy400_2142: NADH ubiquinone oxidoreductase chain A (EC 1.6.5.3)
*
Herpetosiphon aurantiacus ATCC 23779

Site:
position = -117
score = 5.10844
sequence = CTGTGATATACTTCGCAA

Gene: Haur_4980: NADH ubiquinone oxidoreductase chain A (EC 1.6.5.3)
*
Roseiflexus castenholzii DSM 13941

Site:
position = -64
score = 4.95774
sequence = TTGTGATATACTCAACAA

Gene: Rcas_2088: NADH ubiquinone oxidoreductase chain A (EC 1.6.5.3)
 
Roseiflexus sp. RS-1

Gene: RoseRS_2989: NADH ubiquinone oxidoreductase chain A (EC 1.6.5.3)
NADH ubiquinone oxidoreductase chain A (EC 1.6.5.3)
nuoB
 
Chloroflexus aggregans DSM 9485

Gene: Cagg_1630: NADH-ubiquinone oxidoreductase chain B (EC 1.6.5.3)
 
Chloroflexus sp. Y-400-fl

Gene: Chy400_2141: NADH-ubiquinone oxidoreductase chain B (EC 1.6.5.3)
 
Herpetosiphon aurantiacus ATCC 23779

Gene: Haur_4981: NADH-ubiquinone oxidoreductase chain B (EC 1.6.5.3)
 
Roseiflexus castenholzii DSM 13941

Gene: Rcas_2089: NADH-ubiquinone oxidoreductase chain B (EC 1.6.5.3)
 
Roseiflexus sp. RS-1

Gene: RoseRS_2990: NADH-ubiquinone oxidoreductase chain B (EC 1.6.5.3)
NADH-ubiquinone oxidoreductase chain B (EC 1.6.5.3)
nuoC
 
Chloroflexus aggregans DSM 9485

Gene: Cagg_1629: NADH-ubiquinone oxidoreductase chain C (EC 1.6.5.3)
 
Chloroflexus sp. Y-400-fl

Gene: Chy400_2140: NADH-ubiquinone oxidoreductase chain C (EC 1.6.5.3)
 
Herpetosiphon aurantiacus ATCC 23779

Gene: Haur_4982: NADH-ubiquinone oxidoreductase chain C (EC 1.6.5.3)
 
Roseiflexus castenholzii DSM 13941

Gene: Rcas_2090: NADH-ubiquinone oxidoreductase chain C (EC 1.6.5.3)
 
Roseiflexus sp. RS-1

Gene: RoseRS_2991: NADH-ubiquinone oxidoreductase chain C (EC 1.6.5.3)
NADH-ubiquinone oxidoreductase chain C (EC 1.6.5.3)
nuoD
 
Chloroflexus aggregans DSM 9485

Gene: Cagg_1628: NADH-ubiquinone oxidoreductase chain D (EC 1.6.5.3)
 
Chloroflexus sp. Y-400-fl

Gene: Chy400_2139: NADH-ubiquinone oxidoreductase chain D (EC 1.6.5.3)
 
Herpetosiphon aurantiacus ATCC 23779

Gene: Haur_4983: NADH-ubiquinone oxidoreductase chain D (EC 1.6.5.3)
 
Roseiflexus castenholzii DSM 13941

Gene: Rcas_2091: NADH-ubiquinone oxidoreductase chain D (EC 1.6.5.3)
 
Roseiflexus sp. RS-1

Gene: RoseRS_2992: NADH-ubiquinone oxidoreductase chain D (EC 1.6.5.3)
NADH-ubiquinone oxidoreductase chain D (EC 1.6.5.3)
nuoI
 
Chloroflexus aggregans DSM 9485

Gene: Cagg_1627: NADH-ubiquinone oxidoreductase chain I (EC 1.6.5.3)
 
Chloroflexus sp. Y-400-fl

Gene: Chy400_2138: NADH-ubiquinone oxidoreductase chain I (EC 1.6.5.3)
 
Herpetosiphon aurantiacus ATCC 23779

Gene: Haur_4984: NADH-ubiquinone oxidoreductase chain I (EC 1.6.5.3)
 
Roseiflexus castenholzii DSM 13941

Gene: Rcas_2092: NADH-ubiquinone oxidoreductase chain I (EC 1.6.5.3)
 
Roseiflexus sp. RS-1

Gene: RoseRS_2993: NADH-ubiquinone oxidoreductase chain I (EC 1.6.5.3)
NADH-ubiquinone oxidoreductase chain I (EC 1.6.5.3)
nuoH
 
Chloroflexus aggregans DSM 9485

Gene: Cagg_1626: NADH-ubiquinone oxidoreductase chain H (EC 1.6.5.3)
 
Chloroflexus sp. Y-400-fl

Gene: Chy400_2137: NADH-ubiquinone oxidoreductase chain H (EC 1.6.5.3)
 
Herpetosiphon aurantiacus ATCC 23779

Gene: Haur_4985: NADH-ubiquinone oxidoreductase chain H (EC 1.6.5.3)
 
Roseiflexus castenholzii DSM 13941

Gene: Rcas_2093: NADH-ubiquinone oxidoreductase chain H (EC 1.6.5.3)
 
Roseiflexus sp. RS-1

Gene: RoseRS_2994: NADH-ubiquinone oxidoreductase chain H (EC 1.6.5.3)
NADH-ubiquinone oxidoreductase chain H (EC 1.6.5.3)
nuoJ
 
Chloroflexus aggregans DSM 9485

Gene: Cagg_1625: NADH-ubiquinone oxidoreductase chain J (EC 1.6.5.3)
 
Chloroflexus sp. Y-400-fl

Gene: Chy400_2136: NADH-ubiquinone oxidoreductase chain J (EC 1.6.5.3)
 
Herpetosiphon aurantiacus ATCC 23779

Gene: Haur_4986: NADH-ubiquinone oxidoreductase chain J (EC 1.6.5.3)
 
Roseiflexus castenholzii DSM 13941

Gene: Rcas_2094: NADH-ubiquinone oxidoreductase chain J (EC 1.6.5.3)
 
Roseiflexus sp. RS-1

Gene: RoseRS_2995: NADH-ubiquinone oxidoreductase chain J (EC 1.6.5.3)
NADH-ubiquinone oxidoreductase chain J (EC 1.6.5.3)
nuoK
 
Chloroflexus aggregans DSM 9485

Gene: Cagg_1624: NADH-ubiquinone oxidoreductase chain K (EC 1.6.5.3)
 
Chloroflexus sp. Y-400-fl

Gene: Chy400_2135: NADH-ubiquinone oxidoreductase chain K (EC 1.6.5.3)
 
Herpetosiphon aurantiacus ATCC 23779

Gene: Haur_4987: NADH-ubiquinone oxidoreductase chain K (EC 1.6.5.3)
 
Roseiflexus castenholzii DSM 13941

Gene: Rcas_2095: NADH-ubiquinone oxidoreductase chain K (EC 1.6.5.3)
 
Roseiflexus sp. RS-1

Gene: RoseRS_2996: NADH-ubiquinone oxidoreductase chain K (EC 1.6.5.3)
NADH-ubiquinone oxidoreductase chain K (EC 1.6.5.3)
nuoL
 
Chloroflexus aggregans DSM 9485

Gene: Cagg_1623: NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3)
 
Chloroflexus sp. Y-400-fl

Gene: Chy400_2134: NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3)
 
Herpetosiphon aurantiacus ATCC 23779

Gene: Haur_4988: NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3)
 
Roseiflexus castenholzii DSM 13941

Gene: Rcas_2096: NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3)
 
Roseiflexus sp. RS-1

Gene: RoseRS_2997: NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3)
NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3)
nuoM1
 
Chloroflexus aggregans DSM 9485

Gene: Cagg_1622: NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3)
 
Chloroflexus sp. Y-400-fl

Gene: Chy400_2133: NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3)
 
Herpetosiphon aurantiacus ATCC 23779

Gene: Haur_4989: NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3)
 
Roseiflexus castenholzii DSM 13941

Gene: Rcas_2097: NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3)
 
Roseiflexus sp. RS-1

Gene: RoseRS_2998: NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3)
NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3)
nuoM2
 
Chloroflexus aggregans DSM 9485

Gene: Cagg_1621: NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3)
 
Chloroflexus sp. Y-400-fl

Gene: Chy400_2132: NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3)
 
Herpetosiphon aurantiacus ATCC 23779

Gene: Haur_4990: NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3)
 
Roseiflexus castenholzii DSM 13941

Gene: Rcas_2098: NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3)
 
Roseiflexus sp. RS-1

Gene: RoseRS_2999: NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3)
NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3)
nuoN
 
Chloroflexus aggregans DSM 9485

Gene: Cagg_1620: NADH-ubiquinone oxidoreductase chain N (EC 1.6.5.3)
 
Chloroflexus sp. Y-400-fl

Gene: Chy400_2131: NADH-ubiquinone oxidoreductase chain N (EC 1.6.5.3)
 
Herpetosiphon aurantiacus ATCC 23779

Gene: Haur_4991: NADH-ubiquinone oxidoreductase chain N (EC 1.6.5.3)
 
Roseiflexus castenholzii DSM 13941

Gene: Rcas_2099: NADH-ubiquinone oxidoreductase chain N (EC 1.6.5.3)
 
Roseiflexus sp. RS-1

Gene: RoseRS_3000: NADH-ubiquinone oxidoreductase chain N (EC 1.6.5.3)
NADH-ubiquinone oxidoreductase chain N (EC 1.6.5.3)
 
CRON 2.
cyoA
 
Chloroflexus aggregans DSM 9485
 
Chloroflexus sp. Y-400-fl
 
Herpetosiphon aurantiacus ATCC 23779

Gene: Haur_0104: Cytochrome c oxidase polypeptide II (EC 1.9.3.1)
*
Roseiflexus castenholzii DSM 13941

Site:
position = -127
score = 4.08886
sequence = TCGTGCAACTTTTCACGT

Gene: Rcas_3558: Cytochrome c oxidase polypeptide II (EC 1.9.3.1)
*
Roseiflexus sp. RS-1

Site:
position = -131
score = 4.08886
sequence = TCGTGCAACTTTTCACGT

Gene: RoseRS_2263: Cytochrome c oxidase polypeptide II (EC 1.9.3.1)
Cytochrome c oxidase polypeptide II (EC 1.9.3.1)
cyoB
 
Chloroflexus aggregans DSM 9485
 
Chloroflexus sp. Y-400-fl
 
Herpetosiphon aurantiacus ATCC 23779

Gene: Haur_0105: Cytochrome c oxidase polypeptide I (EC 1.9.3.1)
 
Roseiflexus castenholzii DSM 13941

Gene: Rcas_3557: Cytochrome c oxidase polypeptide I (EC 1.9.3.1)
 
Roseiflexus sp. RS-1

Gene: RoseRS_2264: Cytochrome c oxidase polypeptide I (EC 1.9.3.1)
Cytochrome c oxidase polypeptide I (EC 1.9.3.1)
cyoC
 
Chloroflexus aggregans DSM 9485
 
Chloroflexus sp. Y-400-fl
 
Herpetosiphon aurantiacus ATCC 23779

Gene: Haur_0106: Cytochrome c oxidase polypeptide III (EC 1.9.3.1)
 
Roseiflexus castenholzii DSM 13941

Gene: Rcas_3556: Cytochrome c oxidase polypeptide III (EC 1.9.3.1)
 
Roseiflexus sp. RS-1

Gene: RoseRS_2265: Cytochrome c oxidase polypeptide III (EC 1.9.3.1)
Cytochrome c oxidase polypeptide III (EC 1.9.3.1)
cyoD
 
Chloroflexus aggregans DSM 9485
 
Chloroflexus sp. Y-400-fl
 
Herpetosiphon aurantiacus ATCC 23779

Gene: Haur_0107: caa(3)-type oxidase, subunit IV
 
Roseiflexus castenholzii DSM 13941

Gene: Rcas_3555: caa(3)-type oxidase, subunit IV
 
Roseiflexus sp. RS-1

Gene: RoseRS_2266: caa(3)-type oxidase, subunit IV
caa(3)-type oxidase, subunit IV
cyoE
 
Chloroflexus aggregans DSM 9485
 
Chloroflexus sp. Y-400-fl
 
Herpetosiphon aurantiacus ATCC 23779

Gene: Haur_0108: CtaG protein
 
Roseiflexus castenholzii DSM 13941

Gene: Rcas_3554: CtaG protein
 
Roseiflexus sp. RS-1

Gene: RoseRS_2267: CtaG protein
CtaG protein
 
CRON 3.
pckA
 
Chloroflexus aggregans DSM 9485

Gene: Cagg_3060: Phosphoenolpyruvate carboxykinase [GTP] (EC 4.1.1.32)
 
Chloroflexus sp. Y-400-fl

Gene: Chy400_2513: Phosphoenolpyruvate carboxykinase [GTP] (EC 4.1.1.32)
*
Herpetosiphon aurantiacus ATCC 23779

Site:
position = -117
score = 4.14204
sequence = TTGTGAAGTTTTTCCTTA

Gene: Haur_0429: Phosphoenolpyruvate carboxykinase [GTP] (EC 4.1.1.32)
*
Roseiflexus castenholzii DSM 13941

Site:
position = -42
score = 3.90304
sequence = TCGTGATGTGTTGCACGG

Gene: Rcas_2846: Phosphoenolpyruvate carboxykinase [GTP] (EC 4.1.1.32)
*
Roseiflexus sp. RS-1

Site:
position = -42
score = 5.26345
sequence = TCGTGATGTGTTTCACGA

Gene: RoseRS_2496: Phosphoenolpyruvate carboxykinase [GTP] (EC 4.1.1.32)
Phosphoenolpyruvate carboxykinase [GTP] (EC 4.1.1.32)
 
CRON 4.
Chy400_0034
 
Chloroflexus aggregans DSM 9485
*
Chloroflexus sp. Y-400-fl

Site:
position = -34
score = 4.06988
sequence = TCGTGAAAGAATCCACGA

Gene: Chy400_0034: hypothetical protein
 
Herpetosiphon aurantiacus ATCC 23779
 
Roseiflexus castenholzii DSM 13941
 
Roseiflexus sp. RS-1
hypothetical protein
ctaB
 
Chloroflexus aggregans DSM 9485
 
Chloroflexus sp. Y-400-fl

Gene: Chy400_0033: Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-)
 
Herpetosiphon aurantiacus ATCC 23779

Gene: Haur_3708: Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-)
*
Roseiflexus castenholzii DSM 13941

Site:
position = -113
score = 4.73822
sequence = TTGTGAAGTTTGACACAA

Gene: Rcas_4304: Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-)
*
Roseiflexus sp. RS-1

Site:
position = -116
score = 4.73822
sequence = TTGTGAAGTTTGACACAA

Gene: RoseRS_0224: Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-)
Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-)
 
CRON 5.
rex
*
Chloroflexus aggregans DSM 9485

Site:
position = -47
score = 4.70205
sequence = TTGTGCTACACTTCACAT

Gene: Cagg_0157: Redox-sensitive transcriptional regulator Rex
*
Chloroflexus sp. Y-400-fl

Site:
position = -55
score = 4.70205
sequence = TTGTGCTACACTTCACAT

Gene: Chy400_3940: Redox-sensitive transcriptional regulator Rex
*
Herpetosiphon aurantiacus ATCC 23779

Site:
position = -121
score = 4.30843
sequence = TTGCACTATACTTCACAA

Gene: Haur_4427: Redox-sensitive transcriptional regulator Rex
*
Roseiflexus castenholzii DSM 13941

Site:
position = -109
score = 4.26405
sequence = TAGTGCTACACTTCACAT

Gene: Rcas_1392: Redox-sensitive transcriptional regulator Rex
*
Roseiflexus sp. RS-1

Site:
position = -157
score = 4.26405
sequence = TAGTGCTACACTTCACAT

Gene: RoseRS_4103: Redox-sensitive transcriptional regulator Rex
Redox-sensitive transcriptional regulator Rex
 
CRON 6.
hepT
*
Chloroflexus aggregans DSM 9485

Site:
position = -125
score = 5.40922
sequence = TTGTGGCGAATATCACAA

Gene: Cagg_0899: Heptaprenyl diphosphate synthase component II (EC 2.5.1.30)
*
Chloroflexus sp. Y-400-fl

Site:
position = -123
score = 5.69737
sequence = TTGTGGTGAATATCACAA

Gene: Chy400_4040: Heptaprenyl diphosphate synthase component II (EC 2.5.1.30)
*
Herpetosiphon aurantiacus ATCC 23779

Site:
position = -44
score = 4.61054
sequence = ACGCGATAACTTTCACAA

Gene: Haur_2345: Heptaprenyl diphosphate synthase component II (EC 2.5.1.30)
*
Roseiflexus castenholzii DSM 13941

Site:
position = -48
score = 5.81388
sequence = TTGTTATGTATTTCACAA

Gene: Rcas_2323: Heptaprenyl diphosphate synthase component II (EC 2.5.1.30)
*
Roseiflexus sp. RS-1

Site:
position = -48
score = 5.25016
sequence = TTGTTCAGTATTTCACAA

Gene: RoseRS_1698: Heptaprenyl diphosphate synthase component II (EC 2.5.1.30)
Heptaprenyl diphosphate synthase component II (EC 2.5.1.30)
 
CRON 7.
atpB
*
Chloroflexus aggregans DSM 9485

Site:
position = -105
score = 4.29892
sequence = TTGTGAAAGACTGAACAA

Gene: Cagg_0991: ATP synthase A chain (EC 3.6.3.14)
*
Chloroflexus sp. Y-400-fl

Site:
position = -109
score = 3.95463
sequence = TTGTGAAAGATCGAACAA

Gene: Chy400_3293: ATP synthase A chain (EC 3.6.3.14)
 
Herpetosiphon aurantiacus ATCC 23779

Gene: Haur_4066: ATP synthase A chain (EC 3.6.3.14)
*
Roseiflexus castenholzii DSM 13941

Site:
position = -36
score = 4.41404
sequence = TTGTGAAAGTGTTCTCAA

Gene: Rcas_1271: ATP synthase A chain (EC 3.6.3.14)
*
Roseiflexus sp. RS-1

Site:
position = -44
score = 4.41404
sequence = TTGTGAAAGTGTTCTCAA

Gene: RoseRS_0518: ATP synthase A chain (EC 3.6.3.14)
ATP synthase A chain (EC 3.6.3.14)
atpE
 
Chloroflexus aggregans DSM 9485

Gene: Cagg_0990: ATP synthase C chain (EC 3.6.3.14)
 
Chloroflexus sp. Y-400-fl

Gene: Chy400_3292: ATP synthase C chain (EC 3.6.3.14)
 
Herpetosiphon aurantiacus ATCC 23779

Gene: Haur_4067: ATP synthase C chain (EC 3.6.3.14)
 
Roseiflexus castenholzii DSM 13941

Gene: Rcas_1270: ATP synthase C chain (EC 3.6.3.14)
 
Roseiflexus sp. RS-1

Gene: RoseRS_0517: ATP synthase C chain (EC 3.6.3.14)
ATP synthase C chain (EC 3.6.3.14)
atpF
 
Chloroflexus aggregans DSM 9485

Gene: Cagg_0989: ATP synthase B chain (EC 3.6.3.14)
 
Chloroflexus sp. Y-400-fl

Gene: Chy400_3291: ATP synthase B chain (EC 3.6.3.14)
 
Herpetosiphon aurantiacus ATCC 23779

Gene: Haur_4068: ATP synthase B chain (EC 3.6.3.14)
 
Roseiflexus castenholzii DSM 13941

Gene: Rcas_1269: ATP synthase B chain (EC 3.6.3.14)
 
Roseiflexus sp. RS-1

Gene: RoseRS_0516: ATP synthase B chain (EC 3.6.3.14)
ATP synthase B chain (EC 3.6.3.14)
atpH
 
Chloroflexus aggregans DSM 9485

Gene: Cagg_0988: ATP synthase delta chain (EC 3.6.3.14)
 
Chloroflexus sp. Y-400-fl

Gene: Chy400_3290: ATP synthase delta chain (EC 3.6.3.14)
 
Herpetosiphon aurantiacus ATCC 23779

Gene: Haur_4069: ATP synthase delta chain (EC 3.6.3.14)
 
Roseiflexus castenholzii DSM 13941

Gene: Rcas_1268: ATP synthase delta chain (EC 3.6.3.14)
 
Roseiflexus sp. RS-1

Gene: RoseRS_0515: ATP synthase delta chain (EC 3.6.3.14)
ATP synthase delta chain (EC 3.6.3.14)
atpA
 
Chloroflexus aggregans DSM 9485

Gene: Cagg_0987: ATP synthase alpha chain (EC 3.6.3.14)
 
Chloroflexus sp. Y-400-fl

Gene: Chy400_3289: ATP synthase alpha chain (EC 3.6.3.14)
 
Herpetosiphon aurantiacus ATCC 23779

Gene: Haur_4070: ATP synthase alpha chain (EC 3.6.3.14)
 
Roseiflexus castenholzii DSM 13941

Gene: Rcas_1267: ATP synthase alpha chain (EC 3.6.3.14)
 
Roseiflexus sp. RS-1

Gene: RoseRS_0514: ATP synthase alpha chain (EC 3.6.3.14)
ATP synthase alpha chain (EC 3.6.3.14)
atpG
 
Chloroflexus aggregans DSM 9485

Gene: Cagg_0986: ATP synthase gamma chain (EC 3.6.3.14)
 
Chloroflexus sp. Y-400-fl

Gene: Chy400_3288: ATP synthase gamma chain (EC 3.6.3.14)
 
Herpetosiphon aurantiacus ATCC 23779

Gene: Haur_4071: ATP synthase gamma chain (EC 3.6.3.14)
 
Roseiflexus castenholzii DSM 13941

Gene: Rcas_1266: ATP synthase gamma chain (EC 3.6.3.14)
 
Roseiflexus sp. RS-1

Gene: RoseRS_0513: ATP synthase gamma chain (EC 3.6.3.14)
ATP synthase gamma chain (EC 3.6.3.14)
atpD
 
Chloroflexus aggregans DSM 9485

Gene: Cagg_0985: ATP synthase beta chain (EC 3.6.3.14)
 
Chloroflexus sp. Y-400-fl

Gene: Chy400_3287: ATP synthase beta chain (EC 3.6.3.14)
 
Herpetosiphon aurantiacus ATCC 23779

Gene: Haur_4072: ATP synthase beta chain (EC 3.6.3.14)
 
Roseiflexus castenholzii DSM 13941

Gene: Rcas_1265: ATP synthase beta chain (EC 3.6.3.14)
 
Roseiflexus sp. RS-1

Gene: RoseRS_0512: ATP synthase beta chain (EC 3.6.3.14)
ATP synthase beta chain (EC 3.6.3.14)
atpC
 
Chloroflexus aggregans DSM 9485

Gene: Cagg_0984: ATP synthase epsilon chain (EC 3.6.3.14)
 
Chloroflexus sp. Y-400-fl

Gene: Chy400_3286: ATP synthase epsilon chain (EC 3.6.3.14)
 
Herpetosiphon aurantiacus ATCC 23779

Gene: Haur_4073: ATP synthase epsilon chain (EC 3.6.3.14)
 
Roseiflexus castenholzii DSM 13941

Gene: Rcas_1264: ATP synthase epsilon chain (EC 3.6.3.14)
 
Roseiflexus sp. RS-1

Gene: RoseRS_0511: ATP synthase epsilon chain (EC 3.6.3.14)
ATP synthase epsilon chain (EC 3.6.3.14)
 
CRON 8.
Cagg_1949
*
Chloroflexus aggregans DSM 9485

Site:
position = -68
score = 5.05023
sequence = ATGTGGTATATTTCACAT

Gene: Cagg_1949: GCN5-related N-acetyltransferase
*
Chloroflexus sp. Y-400-fl

Site:
position = -63
score = 4.7566
sequence = ATGTGGTATATTTCACAC

Gene: Chy400_1583: GCN5-related N-acetyltransferase
 
Herpetosiphon aurantiacus ATCC 23779
*
Roseiflexus castenholzii DSM 13941

Site:
position = -44
score = 4.29114
sequence = TTGTGCAAGATTTCACGG

Gene: Rcas_3936: GCN5-related N-acetyltransferase
*
Roseiflexus sp. RS-1

Site:
position = -40
score = 4.58477
sequence = TTGTGCAAGATTTCACGT

Gene: RoseRS_2002: GCN5-related N-acetyltransferase
GCN5-related N-acetyltransferase
 
CRON 9.
Cagg_2669
*2
Chloroflexus aggregans DSM 9485

Site:
position = -28
score = 5.04173
sequence = TCGTGATGTTTGTCACGA

Gene: Cagg_2669: Cytochrome c family protein

Site:
position = -56
score = 4.74875
sequence = AAGTGAATAATATCACTA

Site:
position = -145
score = 4.46651
sequence = GTGACACATATTTCACAA

Gene: Cagg_2026: Cytochrome c family protein
 
Chloroflexus sp. Y-400-fl
 
Herpetosiphon aurantiacus ATCC 23779
*
Roseiflexus castenholzii DSM 13941

Site:
position = -53
score = 5.16928
sequence = TCGTGAAGCATATCACGA

Site:
position = -79
score = 5.32124
sequence = TTGTGATTATTATTACAA

Gene: Rcas_3898: Cytochrome c family protein
*
Roseiflexus sp. RS-1

Site:
position = -51
score = 5.09756
sequence = TCGTGAAGTGTATCACGA

Site:
position = -73
score = 4.96714
sequence = TTGTGATTATTATTGCAA

Gene: RoseRS_0596: Cytochrome c family protein
Cytochrome c family protein
Cagg_2670
 2
Chloroflexus aggregans DSM 9485

Gene: Cagg_2670: hypothetical protein

Gene: Cagg_2025: hypothetical protein
 
Chloroflexus sp. Y-400-fl
 
Herpetosiphon aurantiacus ATCC 23779
 
Roseiflexus castenholzii DSM 13941

Gene: Rcas_3899: hypothetical protein
 
Roseiflexus sp. RS-1

Gene: RoseRS_0597: hypothetical protein
hypothetical protein
 
CRON 10.
acs
*
Chloroflexus aggregans DSM 9485

Site:
position = -56
score = 5.27843
sequence = TTGTTATATCTATCACAA

Gene: Cagg_3394: Acetyl-coenzyme A synthetase (EC 6.2.1.1)
*
Chloroflexus sp. Y-400-fl

Site:
position = -54
score = 5.4272
sequence = TTGTTATCTATATCACAA

Gene: Chy400_0662: Acetyl-coenzyme A synthetase (EC 6.2.1.1)
 
Herpetosiphon aurantiacus ATCC 23779
 
Roseiflexus castenholzii DSM 13941

Gene: Rcas_2930: Acetyl-coenzyme A synthetase (EC 6.2.1.1)
 
Roseiflexus sp. RS-1

Gene: RoseRS_3202: Acetyl-coenzyme A synthetase (EC 6.2.1.1)
Acetyl-coenzyme A synthetase (EC 6.2.1.1)
 
CRON 11.
ndh
*
Chloroflexus aggregans DSM 9485

Site:
position = -33
score = 5.29564
sequence = TTGTGAACAATTTCACCA

Gene: Cagg_0500: NADH dehydrogenase (EC 1.6.99.3)
*
Chloroflexus sp. Y-400-fl

Site:
position = -33
score = 5.29108
sequence = TTGTGAATGATTTCACTA

Gene: Chy400_3620: NADH dehydrogenase (EC 1.6.99.3)
 
Herpetosiphon aurantiacus ATCC 23779
 
Roseiflexus castenholzii DSM 13941

Gene: Rcas_2276: NADH dehydrogenase (EC 1.6.99.3)
 
Roseiflexus sp. RS-1
NADH dehydrogenase (EC 1.6.99.3)
 
CRON 12.
nuoM3
*
Chloroflexus aggregans DSM 9485

Site:
position = -295
score = 4.85908
sequence = ATGTGAGGTATGTCACAA

Gene: Cagg_0775: NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3)
*
Chloroflexus sp. Y-400-fl

Site:
position = -250
score = 5.23418
sequence = ACGTGATATTTATCACAA

Gene: Chy400_3880: NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3)
 
Herpetosiphon aurantiacus ATCC 23779
 
Roseiflexus castenholzii DSM 13941

Gene: Rcas_3383: NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3)
 
Roseiflexus sp. RS-1

Gene: RoseRS_2231: NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3)
NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3)
 
CRON 13.
fpr
*
Chloroflexus aggregans DSM 9485

Site:
position = -56
score = 5.19428
sequence = CTGTGCTGTATATCACAA

Gene: Cagg_2469: Ferredoxin--NADP(+) reductase (EC 1.18.1.2)
*
Chloroflexus sp. Y-400-fl

Site:
position = -61
score = 4.54656
sequence = CTGTGCTGTAAATCACAA

Gene: Chy400_1671: Ferredoxin--NADP(+) reductase (EC 1.18.1.2)
 
Herpetosiphon aurantiacus ATCC 23779

Gene: Haur_3267: Ferredoxin--NADP(+) reductase (EC 1.18.1.2)
*
Roseiflexus castenholzii DSM 13941

Site:
position = -115
score = 3.92477
sequence = CTGTTCCTTTCATCACAA

Gene: Rcas_4255: Ferredoxin--NADP(+) reductase (EC 1.18.1.2)
*
Roseiflexus sp. RS-1

Site:
position = -106
score = 3.83391
sequence = CTGTTCCATCCATCACAA

Gene: RoseRS_0005: Ferredoxin--NADP(+) reductase (EC 1.18.1.2)
Ferredoxin--NADP(+) reductase (EC 1.18.1.2)
 
CRON 14.
bchY
 
Chloroflexus aggregans DSM 9485

Gene: Cagg_0850: Chlorophyllide reductase subunit BchY (EC 1.18.-.-)
 
Chloroflexus sp. Y-400-fl

Gene: Chy400_4108: Chlorophyllide reductase subunit BchY (EC 1.18.-.-)
 
Herpetosiphon aurantiacus ATCC 23779
*
Roseiflexus castenholzii DSM 13941

Site:
position = -69
score = 4.71908
sequence = TTGTGATGTTTGTCACCT

Gene: Rcas_3744: Chlorophyllide reductase subunit BchY (EC 1.18.-.-)
*
Roseiflexus sp. RS-1

Site:
position = -56
score = 4.4705
sequence = TTGTGAATGTTATCACCT

Gene: RoseRS_3257: Chlorophyllide reductase subunit BchY (EC 1.18.-.-)
Chlorophyllide reductase subunit BchY (EC 1.18.-.-)
bchZ
 
Chloroflexus aggregans DSM 9485

Gene: Cagg_0851: Chlorophyllide reductase subunit BchZ (EC 1.18.-.-)
 
Chloroflexus sp. Y-400-fl

Gene: Chy400_4109: Chlorophyllide reductase subunit BchZ (EC 1.18.-.-)
 
Herpetosiphon aurantiacus ATCC 23779
 
Roseiflexus castenholzii DSM 13941

Gene: Rcas_3743: Chlorophyllide reductase subunit BchZ (EC 1.18.-.-)
 
Roseiflexus sp. RS-1

Gene: RoseRS_3256: Chlorophyllide reductase subunit BchZ (EC 1.18.-.-)
Chlorophyllide reductase subunit BchZ (EC 1.18.-.-)
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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