Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog LexA2 - Xanthomonadales

Properties
Regulator type: Transcription factor
Regulator family: LexA
Regulation mode: repressor
Biological process: SOS response
Effector: DNA damage
Phylum: Proteobacteria/gamma
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 2 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Stenotrophomonas maltophilia K279a
Xanthomonas axonopodis pv. citri str. 306 4 1
Xanthomonas campestris pv. campestris str. ATCC 33913 4 1
Xylella fastidiosa 9a5c
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
lexA2
 
Stenotrophomonas maltophilia K279a
*
Xanthomonas axonopodis pv. citri str. 306

Site:
position = -42
score = 6.9282
sequence = GTGTACAAATGTACAC

Gene: XAC1196: SOS-response repressor and protease LexA (EC 3.4.21.88)
*
Xanthomonas campestris pv. campestris str. ATCC 33913

Site:
position = -40
score = 6.9282
sequence = GTGTACAAATGTACAC

Gene: XCC1098: SOS-response repressor and protease LexA (EC 3.4.21.88)
 
Xylella fastidiosa 9a5c
SOS-response repressor and protease LexA (EC 3.4.21.88)
imuA
 
Stenotrophomonas maltophilia K279a
 
Xanthomonas axonopodis pv. citri str. 306

Gene: XAC1197: Predicted RecA/RadA recombinase
 
Xanthomonas campestris pv. campestris str. ATCC 33913

Gene: XCC1099: Predicted RecA/RadA recombinase
 
Xylella fastidiosa 9a5c
Predicted RecA/RadA recombinase
imuB
 
Stenotrophomonas maltophilia K279a
 
Xanthomonas axonopodis pv. citri str. 306

Gene: XAC1198: DNA polymerase-like protein PA0670
 
Xanthomonas campestris pv. campestris str. ATCC 33913

Gene: XCC1100: DNA polymerase-like protein PA0670
 
Xylella fastidiosa 9a5c
DNA polymerase-like protein PA0670
dnaE2
 
Stenotrophomonas maltophilia K279a
 
Xanthomonas axonopodis pv. citri str. 306

Gene: XAC1199: DNA polymerase III alpha subunit (EC 2.7.7.7)
 
Xanthomonas campestris pv. campestris str. ATCC 33913

Gene: XCC1101: DNA polymerase III alpha subunit (EC 2.7.7.7)
 
Xylella fastidiosa 9a5c
DNA polymerase III alpha subunit (EC 2.7.7.7)
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD