Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog LiuR - Rhizobiales

Properties
Regulator type: Transcription factor
Regulator family: MerR
Regulation mode: repressor
Biological process: Branched-chain amino acid degradation
Effector:
Phylum: Proteobacteria/alpha
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 84 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Sinorhizobium meliloti 1021 19 10
Rhizobium sp. NGR234 19 10
Rhizobium leguminosarum bv. viciae 3841 22 10
Rhizobium etli CFN 42 17 9
Agrobacterium tumefaciens str. C58 (Cereon) 18 9
Mesorhizobium sp. BNC1 11 4
Mesorhizobium loti MAFF303099 18 6
Brucella melitensis 16M 20 10
Bartonella quintana str. Toulouse 5 1
Rhodopseudomonas palustris CGA009
Bradyrhizobium japonicum USDA 110
Bradyrhizobium sp. BTAi1
Nitrobacter winogradskyi Nb-255
Azorhizobium caulinodans ORS 571
Xanthobacter autotrophicus Py2
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
fadD
 
Sinorhizobium meliloti 1021
 
Rhizobium sp. NGR234
*
Rhizobium leguminosarum bv. viciae 3841

Site:
position = -159
score = 5.89095
sequence = GTTGACGTTTACGTTAAG

Gene: RL0505: Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
*
Rhizobium etli CFN 42

Site:
position = -159
score = 5.89095
sequence = GTTGACGTTTACGTCAAG

Gene: RHE_CH00478: Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
*
Agrobacterium tumefaciens str. C58 (Cereon)

Site:
position = -243
score = 5.87561
sequence = ATTGACGTTTACGTTAGA

Gene: Atu0405: Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
 
Mesorhizobium sp. BNC1
 
Mesorhizobium loti MAFF303099
 
Brucella melitensis 16M
 
Bartonella quintana str. Toulouse
 
Rhodopseudomonas palustris CGA009
 
Bradyrhizobium japonicum USDA 110
 
Bradyrhizobium sp. BTAi1
 
Nitrobacter winogradskyi Nb-255
 
Azorhizobium caulinodans ORS 571
 
Xanthobacter autotrophicus Py2
Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
 
CRON 2.
SMc00041
*
Sinorhizobium meliloti 1021

Site:
position = -44
score = 4.98345
sequence = ATTTACCTTGACGTTAAC

Site:
position = -38
score = 5.35812
sequence = CTTGACGTTAACGTCAAA

Gene: SMc00041: hypothetical protein
*
Rhizobium sp. NGR234

Site:
position = -44
score = 4.77616
sequence = ATTTACTTTGACGTCAAC

Site:
position = -38
score = 5.27656
sequence = TTTGACGTCAACGTCAAA

Gene: NGR_c07190: hypothetical protein
*
Rhizobium leguminosarum bv. viciae 3841

Site:
position = -34
score = 5.73558
sequence = GTTGACGTTAACGTCAAA

Site:
position = -40
score = 4.94955
sequence = ATTAACGTTGACGTTAAC

Gene: RL1312: hypothetical protein
*
Rhizobium etli CFN 42

Site:
position = -35
score = 5.73558
sequence = GTTGACGTTAACGTCAAA

Site:
position = -41
score = 4.52777
sequence = AATAACGTTGACGTTAAC

Gene: RHE_CH01182: hypothetical protein
 
Agrobacterium tumefaciens str. C58 (Cereon)
 
Mesorhizobium sp. BNC1
 
Mesorhizobium loti MAFF303099
*
Brucella melitensis 16M

Site:
position = 37
score = 4.99028
sequence = TATTACGTAAACGTAAGA

Gene: BMEI1371: hypothetical protein
 
Bartonella quintana str. Toulouse
 
Rhodopseudomonas palustris CGA009

Gene: RPA1842: hypothetical protein
 
Bradyrhizobium japonicum USDA 110

Gene: bll3061: hypothetical protein
 
Bradyrhizobium sp. BTAi1
 
Nitrobacter winogradskyi Nb-255
 
Azorhizobium caulinodans ORS 571

Gene: AZC_3060: hypothetical protein
 
Xanthobacter autotrophicus Py2

Gene: Xaut_3312: hypothetical protein
hypothetical protein
 
CRON 3.
PF03060
*
Sinorhizobium meliloti 1021

Site:
position = -45
score = 5.36291
sequence = TTTGACGTTTACGAGAAC

Site:
position = -39
score = 4.69167
sequence = GTTTACGAGAACGTCAAA

Gene: SMc02150: Dioxygenases related to 2-nitropropane dioxygenase
*
Rhizobium sp. NGR234

Site:
position = -41
score = 4.56773
sequence = GTTTACGCAAACGTCAAA

Site:
position = -47
score = 6.13672
sequence = ATTGACGTTTACGCAAAC

Gene: NGR_c01400: Dioxygenases related to 2-nitropropane dioxygenase
*
Rhizobium leguminosarum bv. viciae 3841

Site:
position = -37
score = 5.7711
sequence = ATTGACGTTTTCGTAAAC

Gene: RL0537: Dioxygenases related to 2-nitropropane dioxygenase
*
Rhizobium etli CFN 42

Site:
position = -37
score = 5.7711
sequence = ATTGACGTTTTCGTAAAC

Gene: RHE_CH00505: Dioxygenases related to 2-nitropropane dioxygenase
*
Agrobacterium tumefaciens str. C58 (Cereon)

Site:
position = -37
score = 4.68405
sequence = ACTTACGTGCGCGTAAAC

Gene: Atu0415: Dioxygenases related to 2-nitropropane dioxygenase
 
Mesorhizobium sp. BNC1
 
Mesorhizobium loti MAFF303099
*
Brucella melitensis 16M

Site:
position = 10
score = 5.51297
sequence = TATTACGTTTACGGAAAC

Gene: BMEII0460: Dioxygenases related to 2-nitropropane dioxygenase
 
Bartonella quintana str. Toulouse
 
Rhodopseudomonas palustris CGA009

Gene: RPA4708: Dioxygenases related to 2-nitropropane dioxygenase
 
Bradyrhizobium japonicum USDA 110

Gene: blr1327: Dioxygenases related to 2-nitropropane dioxygenase
 
Bradyrhizobium sp. BTAi1

Gene: BBta_0960: Dioxygenases related to 2-nitropropane dioxygenase
 
Nitrobacter winogradskyi Nb-255
 
Azorhizobium caulinodans ORS 571
 
Xanthobacter autotrophicus Py2
Dioxygenases related to 2-nitropropane dioxygenase
 
CRON 4.
etfB
*
Sinorhizobium meliloti 1021

Site:
position = -187
score = 5.66377
sequence = TTTTACCTGTACGTAAAC

Gene: SMc00729: Electron transfer flavoprotein, beta subunit
*
Rhizobium sp. NGR234

Site:
position = -167
score = 5.84411
sequence = TCTTACGTGTACGTAAAC

Gene: NGR_c26900: Electron transfer flavoprotein, beta subunit
*
Rhizobium leguminosarum bv. viciae 3841

Site:
position = -180
score = 5.73466
sequence = ATTGACGTGAACGTAAAC

Gene: RL4319: Electron transfer flavoprotein, beta subunit
*
Rhizobium etli CFN 42

Site:
position = -177
score = 5.92911
sequence = GTTGACGTATACGTAAAC

Gene: RHE_CH03792: Electron transfer flavoprotein, beta subunit
*
Agrobacterium tumefaciens str. C58 (Cereon)

Site:
position = -160
score = 5.62294
sequence = ATTTACGTTAACGTCAAC

Gene: Atu3595: Electron transfer flavoprotein, beta subunit
 
Mesorhizobium sp. BNC1

Gene: Meso_3033: Electron transfer flavoprotein, beta subunit
 
Mesorhizobium loti MAFF303099

Gene: mlr3487: Electron transfer flavoprotein, beta subunit
*
Brucella melitensis 16M

Site:
position = -176
score = 5.30574
sequence = ATTGACGTGCACGTCAAC

Gene: BMEI0096: Electron transfer flavoprotein, beta subunit
 
Bartonella quintana str. Toulouse
 
Rhodopseudomonas palustris CGA009

Gene: RPA4750: Electron transfer flavoprotein, beta subunit
 
Bradyrhizobium japonicum USDA 110

Gene: blr1377: Electron transfer flavoprotein, beta subunit
 
Bradyrhizobium sp. BTAi1

Gene: BBta_1140: Electron transfer flavoprotein, beta subunit
 
Nitrobacter winogradskyi Nb-255

Gene: Nwi_0753: Electron transfer flavoprotein, beta subunit
 
Azorhizobium caulinodans ORS 571

Gene: AZC_4666: Electron transfer flavoprotein, beta subunit
 
Xanthobacter autotrophicus Py2

Gene: Xaut_2159: Electron transfer flavoprotein, beta subunit
Electron transfer flavoprotein, beta subunit
etfA
 
Sinorhizobium meliloti 1021

Gene: SMc00728: Electron transfer flavoprotein, alpha subunit
 
Rhizobium sp. NGR234

Gene: NGR_c26910: Electron transfer flavoprotein, alpha subunit
 
Rhizobium leguminosarum bv. viciae 3841

Gene: RL4320: Electron transfer flavoprotein, alpha subunit
 
Rhizobium etli CFN 42

Gene: RHE_CH03793: Electron transfer flavoprotein, alpha subunit
 
Agrobacterium tumefaciens str. C58 (Cereon)

Gene: Atu3596: Electron transfer flavoprotein, alpha subunit
 
Mesorhizobium sp. BNC1

Gene: Meso_3034: Electron transfer flavoprotein, alpha subunit
 
Mesorhizobium loti MAFF303099

Gene: mlr3488: Electron transfer flavoprotein, alpha subunit
 
Brucella melitensis 16M

Gene: BMEI0097: Electron transfer flavoprotein, alpha subunit
 
Bartonella quintana str. Toulouse
 
Rhodopseudomonas palustris CGA009

Gene: RPA4749: Electron transfer flavoprotein, alpha subunit
 
Bradyrhizobium japonicum USDA 110

Gene: blr1378: Electron transfer flavoprotein, alpha subunit
 
Bradyrhizobium sp. BTAi1

Gene: BBta_1141: Electron transfer flavoprotein, alpha subunit
 
Nitrobacter winogradskyi Nb-255

Gene: Nwi_0754: Electron transfer flavoprotein, alpha subunit
 
Azorhizobium caulinodans ORS 571

Gene: AZC_4665: Electron transfer flavoprotein, alpha subunit
 
Xanthobacter autotrophicus Py2

Gene: Xaut_2158: Electron transfer flavoprotein, alpha subunit
Electron transfer flavoprotein, alpha subunit
BMEI0098
 
Sinorhizobium meliloti 1021
 
Rhizobium sp. NGR234
 
Rhizobium leguminosarum bv. viciae 3841
 
Rhizobium etli CFN 42
 
Agrobacterium tumefaciens str. C58 (Cereon)
 
Mesorhizobium sp. BNC1
 
Mesorhizobium loti MAFF303099
 
Brucella melitensis 16M

Gene: BMEI0098: hypothetical protein
 
Bartonella quintana str. Toulouse
 
Rhodopseudomonas palustris CGA009
 
Bradyrhizobium japonicum USDA 110
 
Bradyrhizobium sp. BTAi1
 
Nitrobacter winogradskyi Nb-255
 
Azorhizobium caulinodans ORS 571
 
Xanthobacter autotrophicus Py2
hypothetical protein
hbdA
 
Sinorhizobium meliloti 1021

Gene: SMc00727: 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)
 
Rhizobium sp. NGR234

Gene: NGR_c26920: 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)
 
Rhizobium leguminosarum bv. viciae 3841

Gene: RL4321: 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)
 
Rhizobium etli CFN 42

Gene: RHE_CH03794: 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)
 
Agrobacterium tumefaciens str. C58 (Cereon)

Gene: Atu3597: 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)
 
Mesorhizobium sp. BNC1

Gene: Meso_3035: 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)
 
Mesorhizobium loti MAFF303099

Gene: mlr3490: 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)
 
Brucella melitensis 16M

Gene: BMEI0099: 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)
 
Bartonella quintana str. Toulouse
 
Rhodopseudomonas palustris CGA009

Gene: RPA4748: 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)
 
Bradyrhizobium japonicum USDA 110

Gene: blr1379: 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)
 
Bradyrhizobium sp. BTAi1

Gene: BBta_1142: 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)
 
Nitrobacter winogradskyi Nb-255

Gene: Nwi_0755: 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)
 
Azorhizobium caulinodans ORS 571

Gene: AZC_4664: 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)
 
Xanthobacter autotrophicus Py2

Gene: Xaut_2157: 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)
3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)
 
CRON 5.
etfD
*
Sinorhizobium meliloti 1021

Site:
position = -163
score = 5.30516
sequence = GTTTACGTTTACGTTCAG

Site:
position = -157
score = 4.63528
sequence = GTTTACGTTCAGGTAACA

Gene: SMc02377: Electron transfer flavoprotein-ubiquinone oxidoreductase (EC 1.5.5.1)
*3
Rhizobium sp. NGR234

Gene: NGR_c20460: Electron transfer flavoprotein-ubiquinone oxidoreductase (EC 1.5.5.1)

Gene: NGR_b16630: Electron transfer flavoprotein-ubiquinone oxidoreductase (EC 1.5.5.1)

Site:
position = -125
score = 5.46818
sequence = ATTTACGTTTACGTTCAA

Site:
position = -119
score = 5.01274
sequence = GTTTACGTTCAAGTAAGA

Gene: NGR_c07940: Electron transfer flavoprotein-ubiquinone oxidoreductase (EC 1.5.5.1)
*
Rhizobium leguminosarum bv. viciae 3841

Site:
position = -164
score = 5.61672
sequence = ATTGACGTTGACGTAAGC

Gene: RL1457: Electron transfer flavoprotein-ubiquinone oxidoreductase (EC 1.5.5.1)
*
Rhizobium etli CFN 42

Site:
position = -158
score = 5.8747
sequence = ATTGACGTTAACGTAAGC

Gene: RHE_CH01308: Electron transfer flavoprotein-ubiquinone oxidoreductase (EC 1.5.5.1)
*
Agrobacterium tumefaciens str. C58 (Cereon)

Site:
position = -231
score = 5.16864
sequence = TATTACGTGCACGTAAAA

Gene: Atu0994: Electron transfer flavoprotein-ubiquinone oxidoreductase (EC 1.5.5.1)
 
Mesorhizobium sp. BNC1

Gene: Meso_0911: Electron transfer flavoprotein-ubiquinone oxidoreductase (EC 1.5.5.1)
 
Mesorhizobium loti MAFF303099

Gene: mlr7709: Electron transfer flavoprotein-ubiquinone oxidoreductase (EC 1.5.5.1)
*
Brucella melitensis 16M

Site:
position = -244
score = 6.00831
sequence = TTTGACGTTTACGTTAAG

Site:
position = -238
score = 5.31505
sequence = GTTTACGTTAAGGTAAAA

Gene: BMEI1320: Electron transfer flavoprotein-ubiquinone oxidoreductase (EC 1.5.5.1)
 
Bartonella quintana str. Toulouse

Gene: BQ09690: Electron transfer flavoprotein-ubiquinone oxidoreductase (EC 1.5.5.1)
 
Rhodopseudomonas palustris CGA009

Gene: RPA1037: Electron transfer flavoprotein-ubiquinone oxidoreductase (EC 1.5.5.1)
 
Bradyrhizobium japonicum USDA 110

Gene: blr2524: Electron transfer flavoprotein-ubiquinone oxidoreductase (EC 1.5.5.1)
 
Bradyrhizobium sp. BTAi1

Gene: BBta_2346: Electron transfer flavoprotein-ubiquinone oxidoreductase (EC 1.5.5.1)
 
Nitrobacter winogradskyi Nb-255

Gene: Nwi_2595: Electron transfer flavoprotein-ubiquinone oxidoreductase (EC 1.5.5.1)
 
Azorhizobium caulinodans ORS 571

Gene: AZC_3495: Electron transfer flavoprotein-ubiquinone oxidoreductase (EC 1.5.5.1)
 
Xanthobacter autotrophicus Py2

Gene: Xaut_2374: Electron transfer flavoprotein-ubiquinone oxidoreductase (EC 1.5.5.1)
Electron transfer flavoprotein-ubiquinone oxidoreductase (EC 1.5.5.1)
 
CRON 6.
liuR1
*
Sinorhizobium meliloti 1021

Site:
position = -58
score = 5.58254
sequence = TTTGACTTTTACGTCAAA

Gene: SMc01260: Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family
*
Rhizobium sp. NGR234

Site:
position = -58
score = 5.58254
sequence = TTTGACTTTTACGTCAAA

Gene: NGR_c12400: Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family
*
Rhizobium leguminosarum bv. viciae 3841

Site:
position = -53
score = 5.1698
sequence = ATTGACTATTACGTAAAA

Gene: RL2550: Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family
*
Rhizobium etli CFN 42

Site:
position = -53
score = 5.1698
sequence = ATTGACTATTACGTAAAA

Gene: RHE_CH02217: Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family
*
Agrobacterium tumefaciens str. C58 (Cereon)

Site:
position = -56
score = 5.04417
sequence = ATTGACTTTTACGTGAAG

Site:
position = -50
score = 4.80904
sequence = TTTTACGTGAAGGTCAAA

Gene: Atu1546: Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family
*
Mesorhizobium sp. BNC1

Site:
position = -63
score = 5.22684
sequence = ATTGACTTTTACGTAATC

Gene: Meso_1259: Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family
*
Mesorhizobium loti MAFF303099

Site:
position = -127
score = 5.31034
sequence = ATTGACTTTTACGTAAAT

Gene: mll1317: Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family
*
Brucella melitensis 16M

Site:
position = -65
score = 5.31034
sequence = ATTGACTTTTACGTAAAT

Gene: BMEI0808: Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family
 
Bartonella quintana str. Toulouse
 
Rhodopseudomonas palustris CGA009
 
Bradyrhizobium japonicum USDA 110
 
Bradyrhizobium sp. BTAi1
 
Nitrobacter winogradskyi Nb-255
 
Azorhizobium caulinodans ORS 571
 
Xanthobacter autotrophicus Py2
Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family
 
CRON 7.
mdh
*
Sinorhizobium meliloti 1021

Site:
position = -164
score = 5.97164
sequence = TCTTACGTTTACGTAAGA

Gene: SMc02479: Malate dehydrogenase (EC 1.1.1.37)
*
Rhizobium sp. NGR234

Site:
position = -162
score = 5.59014
sequence = TCTTACCTTTACGTAAGA

Gene: NGR_c31300: Malate dehydrogenase (EC 1.1.1.37)
*
Rhizobium leguminosarum bv. viciae 3841

Site:
position = -159
score = 5.75102
sequence = TATTACGTTTACGTAAGA

Gene: RL4439: Malate dehydrogenase (EC 1.1.1.37)
*
Rhizobium etli CFN 42

Site:
position = -156
score = 5.97164
sequence = TCTTACGTTTACGTAAGA

Gene: RHE_CH03891: Malate dehydrogenase (EC 1.1.1.37)
*
Agrobacterium tumefaciens str. C58 (Cereon)

Site:
position = -160
score = 5.97164
sequence = TCTTACGTTTACGTAAGA

Gene: Atu2639: Malate dehydrogenase (EC 1.1.1.37)
*
Mesorhizobium sp. BNC1

Site:
position = -182
score = 4.59097
sequence = GCTTACCCTTACGTAAAT

Gene: Meso_3395: Malate dehydrogenase (EC 1.1.1.37)
*
Mesorhizobium loti MAFF303099

Site:
position = -203
score = 5.83815
sequence = TTTGACGTTTACGTAAGT

Gene: mll4308: Malate dehydrogenase (EC 1.1.1.37)
*
Brucella melitensis 16M

Site:
position = -179
score = 5.97164
sequence = TCTTACGTTTACGTAAGA

Gene: BMEI0137: Malate dehydrogenase (EC 1.1.1.37)
*
Bartonella quintana str. Toulouse

Site:
position = -279
score = 5.42246
sequence = ATTTACCTTCACGTAAAC

Gene: BQ13450: Malate dehydrogenase (EC 1.1.1.37)
 
Rhodopseudomonas palustris CGA009

Gene: RPA0192: Malate dehydrogenase (EC 1.1.1.37)
 
Bradyrhizobium japonicum USDA 110

Gene: bll0456: Malate dehydrogenase (EC 1.1.1.37)
 
Bradyrhizobium sp. BTAi1

Gene: BBta_0392: Malate dehydrogenase (EC 1.1.1.37)
 
Nitrobacter winogradskyi Nb-255

Gene: Nwi_0419: Malate dehydrogenase (EC 1.1.1.37)
 
Azorhizobium caulinodans ORS 571

Gene: AZC_4016: Malate dehydrogenase (EC 1.1.1.37)
 
Xanthobacter autotrophicus Py2

Gene: Xaut_0153: Malate dehydrogenase (EC 1.1.1.37)
Malate dehydrogenase (EC 1.1.1.37)
sucC
 
Sinorhizobium meliloti 1021

Gene: SMc02480: Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5)
 
Rhizobium sp. NGR234

Gene: NGR_c31290: Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5)
 
Rhizobium leguminosarum bv. viciae 3841

Gene: RL4438: Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5)
 
Rhizobium etli CFN 42

Gene: RHE_CH03890: Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5)
 
Agrobacterium tumefaciens str. C58 (Cereon)

Gene: Atu2638: Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5)
 
Mesorhizobium sp. BNC1

Gene: Meso_3396: Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5)
 
Mesorhizobium loti MAFF303099

Gene: mll4306: Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5)
 
Brucella melitensis 16M

Gene: BMEI0138: Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5)
 
Bartonella quintana str. Toulouse

Gene: BQ13440: Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5)
 
Rhodopseudomonas palustris CGA009

Gene: RPA0191: Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5)
 
Bradyrhizobium japonicum USDA 110

Gene: bll0455: Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5)
 
Bradyrhizobium sp. BTAi1

Gene: BBta_0393: Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5)
 
Nitrobacter winogradskyi Nb-255

Gene: Nwi_0420: Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5)
 
Azorhizobium caulinodans ORS 571

Gene: AZC_4015: Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5)
 2
Xanthobacter autotrophicus Py2

Gene: Xaut_0154: Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5)

Gene: Xaut_0490: Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5)
Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5)
RL3803
 
Sinorhizobium meliloti 1021
 
Rhizobium sp. NGR234
 
Rhizobium leguminosarum bv. viciae 3841
 
Rhizobium etli CFN 42
 
Agrobacterium tumefaciens str. C58 (Cereon)
 
Mesorhizobium sp. BNC1
 
Mesorhizobium loti MAFF303099

Gene: mll4305: Cupin 2 conserved barrel domain protein
 
Brucella melitensis 16M
 
Bartonella quintana str. Toulouse
 
Rhodopseudomonas palustris CGA009
 
Bradyrhizobium japonicum USDA 110
 
Bradyrhizobium sp. BTAi1
 
Nitrobacter winogradskyi Nb-255
 
Azorhizobium caulinodans ORS 571
 
Xanthobacter autotrophicus Py2
Cupin 2 conserved barrel domain protein
RL4437
 
Sinorhizobium meliloti 1021
 
Rhizobium sp. NGR234
 
Rhizobium leguminosarum bv. viciae 3841

Gene: RL4437: hypothetical protein
 
Rhizobium etli CFN 42
 
Agrobacterium tumefaciens str. C58 (Cereon)
 
Mesorhizobium sp. BNC1
 
Mesorhizobium loti MAFF303099

Gene: mll4304: hypothetical protein
 
Brucella melitensis 16M
 
Bartonella quintana str. Toulouse
 
Rhodopseudomonas palustris CGA009
 
Bradyrhizobium japonicum USDA 110

Gene: bll0454: hypothetical protein
 
Bradyrhizobium sp. BTAi1
 
Nitrobacter winogradskyi Nb-255
 
Azorhizobium caulinodans ORS 571
 
Xanthobacter autotrophicus Py2
hypothetical protein
sucD
 
Sinorhizobium meliloti 1021

Gene: SMc02481: Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5)
 
Rhizobium sp. NGR234

Gene: NGR_c31280: Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5)
 
Rhizobium leguminosarum bv. viciae 3841

Gene: RL4436: Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5)
 
Rhizobium etli CFN 42

Gene: RHE_CH03889: Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5)
 
Agrobacterium tumefaciens str. C58 (Cereon)

Gene: Atu2637: Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5)
 
Mesorhizobium sp. BNC1

Gene: Meso_3397: Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5)
 
Mesorhizobium loti MAFF303099

Gene: mll4303: Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5)
 
Brucella melitensis 16M

Gene: BMEI0139: Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5)
 
Bartonella quintana str. Toulouse

Gene: BQ13430: Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5)
 
Rhodopseudomonas palustris CGA009

Gene: RPA0190: Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5)
 
Bradyrhizobium japonicum USDA 110

Gene: bll0453: Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5)
 
Bradyrhizobium sp. BTAi1

Gene: BBta_0394: Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5)
 
Nitrobacter winogradskyi Nb-255

Gene: Nwi_0421: Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5)
 
Azorhizobium caulinodans ORS 571

Gene: AZC_4014: Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5)
 2
Xanthobacter autotrophicus Py2

Gene: Xaut_0155: Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5)

Gene: Xaut_0491: Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5)
Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5)
mll4302
 
Sinorhizobium meliloti 1021
 
Rhizobium sp. NGR234
 
Rhizobium leguminosarum bv. viciae 3841
 
Rhizobium etli CFN 42
 
Agrobacterium tumefaciens str. C58 (Cereon)
 
Mesorhizobium sp. BNC1
 
Mesorhizobium loti MAFF303099

Gene: mll4302: hypothetical protein
 
Brucella melitensis 16M
 
Bartonella quintana str. Toulouse
 
Rhodopseudomonas palustris CGA009
 
Bradyrhizobium japonicum USDA 110
 
Bradyrhizobium sp. BTAi1
 
Nitrobacter winogradskyi Nb-255
 
Azorhizobium caulinodans ORS 571
 
Xanthobacter autotrophicus Py2
hypothetical protein
sucA
 
Sinorhizobium meliloti 1021

Gene: SMc02482: 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)
 
Rhizobium sp. NGR234

Gene: NGR_c31270: 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)
 
Rhizobium leguminosarum bv. viciae 3841

Gene: RL4435: 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)
 
Rhizobium etli CFN 42

Gene: RHE_CH03888: 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)
 
Agrobacterium tumefaciens str. C58 (Cereon)

Gene: Atu2636: 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)
 
Mesorhizobium sp. BNC1

Gene: Meso_3398: 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)
 
Mesorhizobium loti MAFF303099

Gene: mll4301: 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)
 
Brucella melitensis 16M

Gene: BMEI0140: 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)
 
Bartonella quintana str. Toulouse

Gene: BQ13420: 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)
 
Rhodopseudomonas palustris CGA009

Gene: RPA0189: 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)
 
Bradyrhizobium japonicum USDA 110

Gene: bll0452: 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)
 
Bradyrhizobium sp. BTAi1

Gene: BBta_0395: 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)
 
Nitrobacter winogradskyi Nb-255

Gene: Nwi_0422: 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)
 
Azorhizobium caulinodans ORS 571

Gene: AZC_4013: 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)
 
Xanthobacter autotrophicus Py2

Gene: Xaut_0156: 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)
2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)
sucB
 
Sinorhizobium meliloti 1021

Gene: SMc02483: Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61)
 
Rhizobium sp. NGR234

Gene: NGR_c31260: Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61)
 
Rhizobium leguminosarum bv. viciae 3841

Gene: RL4433: Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61)
 
Rhizobium etli CFN 42

Gene: RHE_CH03887: Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61)
 
Agrobacterium tumefaciens str. C58 (Cereon)

Gene: Atu2635: Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61)
 
Mesorhizobium sp. BNC1

Gene: Meso_3399: Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61)
 
Mesorhizobium loti MAFF303099

Gene: mll4300: Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61)
 
Brucella melitensis 16M

Gene: BMEI0141: Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61)
 
Bartonella quintana str. Toulouse

Gene: BQ13410: Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61)
 
Rhodopseudomonas palustris CGA009

Gene: RPA0188: Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61)
 
Bradyrhizobium japonicum USDA 110

Gene: bll0451: Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61)
 
Bradyrhizobium sp. BTAi1

Gene: BBta_0396: Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61)
 
Nitrobacter winogradskyi Nb-255

Gene: Nwi_0423: Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61)
 
Azorhizobium caulinodans ORS 571

Gene: AZC_4011: Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61)
 
Xanthobacter autotrophicus Py2

Gene: Xaut_0158: Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61)
Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61)
RL4434
 
Sinorhizobium meliloti 1021
 
Rhizobium sp. NGR234
 
Rhizobium leguminosarum bv. viciae 3841

Gene: RL4434: hypothetical protein
 
Rhizobium etli CFN 42
 
Agrobacterium tumefaciens str. C58 (Cereon)
 
Mesorhizobium sp. BNC1
 
Mesorhizobium loti MAFF303099
 
Brucella melitensis 16M
 
Bartonella quintana str. Toulouse
 
Rhodopseudomonas palustris CGA009
 
Bradyrhizobium japonicum USDA 110
 
Bradyrhizobium sp. BTAi1
 
Nitrobacter winogradskyi Nb-255
 
Azorhizobium caulinodans ORS 571

Gene: AZC_4012: hypothetical protein
 
Xanthobacter autotrophicus Py2

Gene: Xaut_0157: hypothetical protein
hypothetical protein
 
CRON 8.
acdH
*
Sinorhizobium meliloti 1021

Site:
position = -135
score = 6.25409
sequence = TTTGACGTTTACGCAAAC

Site:
position = -129
score = 4.56773
sequence = GTTTACGCAAACGTCAAA

Gene: SMc02229: Acyl-CoA dehydrogenase (EC 1.3.99.3)
*
Rhizobium sp. NGR234

Site:
position = -135
score = 6.25409
sequence = TTTGACGTTTACGCAAAC

Site:
position = -129
score = 4.56773
sequence = GTTTACGCAAACGTCAAA

Gene: NGR_c01690: Acyl-CoA dehydrogenase (EC 1.3.99.3)
*
Rhizobium leguminosarum bv. viciae 3841

Site:
position = -87
score = 6.25409
sequence = TTTGACGTTTACGCAAAC

Gene: RL0591: Acyl-CoA dehydrogenase (EC 1.3.99.3)
*
Rhizobium etli CFN 42

Site:
position = -87
score = 6.05292
sequence = TCTGACGTTTACGCAAAC

Gene: RHE_CH00557: Acyl-CoA dehydrogenase (EC 1.3.99.3)
*
Agrobacterium tumefaciens str. C58 (Cereon)

Site:
position = -84
score = 5.23048
sequence = TTTGACGTTTACGCGCAC

Site:
position = -78
score = 4.56773
sequence = GTTTACGCGCACGTCAAA

Gene: Atu0501: Acyl-CoA dehydrogenase (EC 1.3.99.3)
*
Mesorhizobium sp. BNC1

Site:
position = -77
score = 5.23048
sequence = TTTGACGTTTACGCGCAC

Gene: Meso_0023: Acyl-CoA dehydrogenase (EC 1.3.99.3)
*
Mesorhizobium loti MAFF303099

Site:
position = -115
score = 6.13672
sequence = ATTGACGTTTACGCAAAC

Gene: mlr5624: Acyl-CoA dehydrogenase (EC 1.3.99.3)
*
Brucella melitensis 16M

Site:
position = -193
score = 6.0599
sequence = TTTGACGTTTACGGAAAC

Site:
position = -187
score = 4.56773
sequence = GTTTACGGAAACGTCAAA

Gene: BMEII0495: Acyl-CoA dehydrogenase (EC 1.3.99.3)
 
Bartonella quintana str. Toulouse
 
Rhodopseudomonas palustris CGA009

Gene: RPA0816: Acyl-CoA dehydrogenase (EC 1.3.99.3)
 
Bradyrhizobium japonicum USDA 110
 
Bradyrhizobium sp. BTAi1

Gene: BBta_0815: Acyl-CoA dehydrogenase (EC 1.3.99.3)
 
Nitrobacter winogradskyi Nb-255
 
Azorhizobium caulinodans ORS 571
 
Xanthobacter autotrophicus Py2
Acyl-CoA dehydrogenase (EC 1.3.99.3)
acdL
 
Sinorhizobium meliloti 1021
 
Rhizobium sp. NGR234
 
Rhizobium leguminosarum bv. viciae 3841
 
Rhizobium etli CFN 42
 
Agrobacterium tumefaciens str. C58 (Cereon)
 
Mesorhizobium sp. BNC1
 
Mesorhizobium loti MAFF303099

Gene: mlr5626: Butyryl-CoA dehydrogenase (EC 1.3.99.2)
 
Brucella melitensis 16M
 
Bartonella quintana str. Toulouse
 
Rhodopseudomonas palustris CGA009
 
Bradyrhizobium japonicum USDA 110
 
Bradyrhizobium sp. BTAi1
 
Nitrobacter winogradskyi Nb-255
 
Azorhizobium caulinodans ORS 571
 
Xanthobacter autotrophicus Py2
Butyryl-CoA dehydrogenase (EC 1.3.99.2)
acdA
 
Sinorhizobium meliloti 1021

Gene: SMc02228: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)
 
Rhizobium sp. NGR234

Gene: NGR_c01680: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)
 
Rhizobium leguminosarum bv. viciae 3841

Gene: RL0592: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)
 
Rhizobium etli CFN 42

Gene: RHE_CH00558: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)
 
Agrobacterium tumefaciens str. C58 (Cereon)

Gene: Atu0502: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)
 
Mesorhizobium sp. BNC1

Gene: Meso_0022: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)
 
Mesorhizobium loti MAFF303099

Gene: mlr5628: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)
 
Brucella melitensis 16M

Gene: BMEII0496: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)
 
Bartonella quintana str. Toulouse
 
Rhodopseudomonas palustris CGA009

Gene: RPA0817: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)
 
Bradyrhizobium japonicum USDA 110
 
Bradyrhizobium sp. BTAi1

Gene: BBta_0816: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)
 
Nitrobacter winogradskyi Nb-255
 
Azorhizobium caulinodans ORS 571
 
Xanthobacter autotrophicus Py2
3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)
acdB
 
Sinorhizobium meliloti 1021

Gene: SMc02227: Enoyl-CoA hydratase [isoleucine degradation] (EC 4.2.1.17) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3)
 
Rhizobium sp. NGR234

Gene: NGR_c01670: Enoyl-CoA hydratase [isoleucine degradation] (EC 4.2.1.17) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3)
 
Rhizobium leguminosarum bv. viciae 3841

Gene: RL0594: Enoyl-CoA hydratase [isoleucine degradation] (EC 4.2.1.17) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3)
 
Rhizobium etli CFN 42

Gene: RHE_CH00559: Enoyl-CoA hydratase [isoleucine degradation] (EC 4.2.1.17) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3)
 
Agrobacterium tumefaciens str. C58 (Cereon)

Gene: Atu0503: Enoyl-CoA hydratase [isoleucine degradation] (EC 4.2.1.17) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3)
 
Mesorhizobium sp. BNC1

Gene: Meso_0021: Enoyl-CoA hydratase [isoleucine degradation] (EC 4.2.1.17) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3)
 
Mesorhizobium loti MAFF303099

Gene: mlr5629: Enoyl-CoA hydratase [isoleucine degradation] (EC 4.2.1.17) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3)
 
Brucella melitensis 16M

Gene: BMEII0497: Enoyl-CoA hydratase [isoleucine degradation] (EC 4.2.1.17) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3)
 
Bartonella quintana str. Toulouse
 
Rhodopseudomonas palustris CGA009

Gene: RPA0818: Enoyl-CoA hydratase [isoleucine degradation] (EC 4.2.1.17) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3)
 
Bradyrhizobium japonicum USDA 110
 
Bradyrhizobium sp. BTAi1

Gene: BBta_0817: Enoyl-CoA hydratase [isoleucine degradation] (EC 4.2.1.17) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3)
 
Nitrobacter winogradskyi Nb-255
 
Azorhizobium caulinodans ORS 571
 
Xanthobacter autotrophicus Py2
Enoyl-CoA hydratase [isoleucine degradation] (EC 4.2.1.17) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3)
Meso_0020
 
Sinorhizobium meliloti 1021
 
Rhizobium sp. NGR234
 
Rhizobium leguminosarum bv. viciae 3841
 
Rhizobium etli CFN 42
 
Agrobacterium tumefaciens str. C58 (Cereon)
 
Mesorhizobium sp. BNC1

Gene: Meso_0020: Predicted thioesterase
 
Mesorhizobium loti MAFF303099

Gene: mlr5630: Predicted thioesterase
 
Brucella melitensis 16M
 
Bartonella quintana str. Toulouse
 
Rhodopseudomonas palustris CGA009
 
Bradyrhizobium japonicum USDA 110
 
Bradyrhizobium sp. BTAi1
 
Nitrobacter winogradskyi Nb-255
 
Azorhizobium caulinodans ORS 571
 
Xanthobacter autotrophicus Py2
Predicted thioesterase
SMc04463
 
Sinorhizobium meliloti 1021
 
Rhizobium sp. NGR234
 
Rhizobium leguminosarum bv. viciae 3841

Gene: RL0593: Mannose-6-phosphate isomerase
 
Rhizobium etli CFN 42
 
Agrobacterium tumefaciens str. C58 (Cereon)
 
Mesorhizobium sp. BNC1
 
Mesorhizobium loti MAFF303099
 
Brucella melitensis 16M
 
Bartonella quintana str. Toulouse
 
Rhodopseudomonas palustris CGA009
 
Bradyrhizobium japonicum USDA 110
 
Bradyrhizobium sp. BTAi1
 
Nitrobacter winogradskyi Nb-255
 
Azorhizobium caulinodans ORS 571
 
Xanthobacter autotrophicus Py2
Mannose-6-phosphate isomerase
 
CRON 9.
acdH2
*
Sinorhizobium meliloti 1021

Site:
position = -73
score = 5.9166
sequence = GTTGACGTTCACGTAAAA

Gene: SMc00977: Acyl-CoA dehydrogenase (EC 1.3.99.3)
*
Rhizobium sp. NGR234

Site:
position = -187
score = 6.35895
sequence = GTTGACGTTTACGTAAAA

Gene: NGR_c04900: Acyl-CoA dehydrogenase (EC 1.3.99.3)
*
Rhizobium leguminosarum bv. viciae 3841

Site:
position = -82
score = 6.35895
sequence = ATTGACGTTTACGTAAAA

Gene: RL0965: Acyl-CoA dehydrogenase (EC 1.3.99.3)
*
Rhizobium etli CFN 42

Site:
position = -83
score = 6.35895
sequence = ATTGACGTTTACGTAAAA

Gene: RHE_CH00905: Acyl-CoA dehydrogenase (EC 1.3.99.3)
*
Agrobacterium tumefaciens str. C58 (Cereon)

Site:
position = -71
score = 6.35895
sequence = ATTGACGTTTACGTAAAA

Gene: Atu0732: Acyl-CoA dehydrogenase (EC 1.3.99.3)
*
Mesorhizobium sp. BNC1

Site:
position = -93
score = 5.92896
sequence = TTTGACCTTTACGTAAGC

Gene: Meso_0723: Acyl-CoA dehydrogenase (EC 1.3.99.3)
*
Mesorhizobium loti MAFF303099

Site:
position = -109
score = 6.47632
sequence = TTTGACGTTTACGTAAAA

Gene: mlr7452: Acyl-CoA dehydrogenase (EC 1.3.99.3)
*
Brucella melitensis 16M

Site:
position = -112
score = 5.80313
sequence = ATTGACGTTTACGTAATA

Gene: BMEI1521: Acyl-CoA dehydrogenase (EC 1.3.99.3)
 
Bartonella quintana str. Toulouse
 
Rhodopseudomonas palustris CGA009

Gene: RPA0958: Acyl-CoA dehydrogenase (EC 1.3.99.3)
 
Bradyrhizobium japonicum USDA 110

Gene: bll2657: Acyl-CoA dehydrogenase (EC 1.3.99.3)
 
Bradyrhizobium sp. BTAi1

Gene: BBta_2498: Acyl-CoA dehydrogenase (EC 1.3.99.3)
 
Nitrobacter winogradskyi Nb-255

Gene: Nwi_0637: Acyl-CoA dehydrogenase (EC 1.3.99.3)
 
Azorhizobium caulinodans ORS 571
 
Xanthobacter autotrophicus Py2

Gene: Xaut_3266: Acyl-CoA dehydrogenase (EC 1.3.99.3)
Acyl-CoA dehydrogenase (EC 1.3.99.3)
echH
 
Sinorhizobium meliloti 1021

Gene: SMc00976: Enoyl-CoA hydratase (EC 4.2.1.17)
 
Rhizobium sp. NGR234

Gene: NGR_c04910: Enoyl-CoA hydratase (EC 4.2.1.17)
 
Rhizobium leguminosarum bv. viciae 3841

Gene: RL0966: Enoyl-CoA hydratase (EC 4.2.1.17)
 
Rhizobium etli CFN 42

Gene: RHE_CH00906: Enoyl-CoA hydratase (EC 4.2.1.17)
 
Agrobacterium tumefaciens str. C58 (Cereon)

Gene: Atu0733: Enoyl-CoA hydratase (EC 4.2.1.17)
 
Mesorhizobium sp. BNC1
 
Mesorhizobium loti MAFF303099

Gene: mlr7453: Enoyl-CoA hydratase (EC 4.2.1.17)
 
Brucella melitensis 16M

Gene: BMEI1522: Enoyl-CoA hydratase (EC 4.2.1.17)
 
Bartonella quintana str. Toulouse
 
Rhodopseudomonas palustris CGA009

Gene: RPA0957: Enoyl-CoA hydratase (EC 4.2.1.17)
 
Bradyrhizobium japonicum USDA 110

Gene: bll2655: Enoyl-CoA hydratase (EC 4.2.1.17)
 
Bradyrhizobium sp. BTAi1

Gene: BBta_2485: Enoyl-CoA hydratase (EC 4.2.1.17)
 
Nitrobacter winogradskyi Nb-255

Gene: Nwi_0636: Enoyl-CoA hydratase (EC 4.2.1.17)
 
Azorhizobium caulinodans ORS 571
 
Xanthobacter autotrophicus Py2
Enoyl-CoA hydratase (EC 4.2.1.17)
 
CRON 10.
fadD
*
Sinorhizobium meliloti 1021

Site:
position = -147
score = 6.05397
sequence = GTTGACGTTTACGTCAAA

Gene: SMc02162: Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
*
Rhizobium sp. NGR234

Site:
position = -147
score = 6.05397
sequence = ATTGACGTTTACGTCAAA

Gene: NGR_c01180: Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
 
Rhizobium leguminosarum bv. viciae 3841
 
Rhizobium etli CFN 42
 
Agrobacterium tumefaciens str. C58 (Cereon)
 
Mesorhizobium sp. BNC1
 
Mesorhizobium loti MAFF303099
 
Brucella melitensis 16M
 
Bartonella quintana str. Toulouse
 
Rhodopseudomonas palustris CGA009
 
Bradyrhizobium japonicum USDA 110
 
Bradyrhizobium sp. BTAi1
 
Nitrobacter winogradskyi Nb-255
 
Azorhizobium caulinodans ORS 571
 
Xanthobacter autotrophicus Py2
Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
 
CRON 11.
liuR2
 
Sinorhizobium meliloti 1021
 
Rhizobium sp. NGR234
 
Rhizobium leguminosarum bv. viciae 3841
 
Rhizobium etli CFN 42
 
Agrobacterium tumefaciens str. C58 (Cereon)
 
Mesorhizobium sp. BNC1

Gene: Meso_0024: Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family
*
Mesorhizobium loti MAFF303099

Site:
position = -154
score = 5.59821
sequence = ATTGACGTAAACGTAAAA

Gene: mlr5623: Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family
 
Brucella melitensis 16M

Gene: BMEII0467: Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family
 
Bartonella quintana str. Toulouse
 
Rhodopseudomonas palustris CGA009
 
Bradyrhizobium japonicum USDA 110
 
Bradyrhizobium sp. BTAi1
 
Nitrobacter winogradskyi Nb-255
 
Azorhizobium caulinodans ORS 571

Gene: AZC_0511: Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family
 
Xanthobacter autotrophicus Py2

Gene: Xaut_3063: Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family
Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family
 
CRON 12.
BMEI0304
 
Sinorhizobium meliloti 1021
 
Rhizobium sp. NGR234
 
Rhizobium leguminosarum bv. viciae 3841
 
Rhizobium etli CFN 42
 
Agrobacterium tumefaciens str. C58 (Cereon)
 
Mesorhizobium sp. BNC1
 
Mesorhizobium loti MAFF303099
*
Brucella melitensis 16M

Site:
position = -84
score = 5.39249
sequence = ATTTACCTTTACGTAAAT

Gene: BMEI0304: Hypothetical Cytosolic Protein
 
Bartonella quintana str. Toulouse
 
Rhodopseudomonas palustris CGA009
 
Bradyrhizobium japonicum USDA 110

Gene: blr2500: Hypothetical Cytosolic Protein
 
Bradyrhizobium sp. BTAi1

Gene: BBta_2322: Hypothetical Cytosolic Protein
 
Nitrobacter winogradskyi Nb-255
 
Azorhizobium caulinodans ORS 571
 
Xanthobacter autotrophicus Py2
Hypothetical Cytosolic Protein
 
CRON 13.
PF09917
*
Sinorhizobium meliloti 1021

Site:
position = -148
score = 5.2258
sequence = ATTTACCTTTACGTACGC

Gene: SMc02391: Protein of unknown function, PF09917
*
Rhizobium sp. NGR234

Site:
position = -118
score = 5.2258
sequence = ATTTACCTTTACGTACGC

Gene: NGR_c08080: Protein of unknown function, PF09917
*
Rhizobium leguminosarum bv. viciae 3841

Site:
position = -61
score = 4.92082
sequence = ATTTACCTTTACGTTCGC

Gene: RL1479: Protein of unknown function, PF09917
 
Rhizobium etli CFN 42

Gene: RHE_CH01328: Protein of unknown function, PF09917
*
Agrobacterium tumefaciens str. C58 (Cereon)

Site:
position = -208
score = 5.40939
sequence = TTTTACGTGAACGTCAAA

Gene: Atu1009: Protein of unknown function, PF09917
 
Mesorhizobium sp. BNC1
*
Mesorhizobium loti MAFF303099

Site:
position = -69
score = 5.26643
sequence = GCTTACGTTTGCGTAAGC

Gene: mll7718: Protein of unknown function, PF09917
*
Brucella melitensis 16M

Site:
position = -148
score = 5.4676
sequence = GTTTACGTTTGCGTAAGC

Site:
position = -154
score = 5.1683
sequence = GTTTACGTTTACGTTTGC

Gene: BMEI1315: Protein of unknown function, PF09917
 
Bartonella quintana str. Toulouse
 
Rhodopseudomonas palustris CGA009
 
Bradyrhizobium japonicum USDA 110
 
Bradyrhizobium sp. BTAi1
 
Nitrobacter winogradskyi Nb-255
 
Azorhizobium caulinodans ORS 571
 
Xanthobacter autotrophicus Py2
Protein of unknown function, PF09917
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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