Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog LexA - Rhizobiales

Properties
Regulator type: Transcription factor
Regulator family: LexA
Regulation mode: repressor
Biological process: SOS response
Effector: DNA damage
Phylum: Proteobacteria/alpha
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 212 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Sinorhizobium meliloti 1021 23 17
Rhizobium sp. NGR234 18 16
Rhizobium leguminosarum bv. viciae 3841 22 18
Rhizobium etli CFN 42 22 18
Agrobacterium tumefaciens str. C58 (Cereon) 25 19
Mesorhizobium sp. BNC1 19 15
Mesorhizobium loti MAFF303099 14 14
Brucella melitensis 16M 16 12
Bartonella quintana str. Toulouse 1 1
Rhodopseudomonas palustris CGA009 17 12
Bradyrhizobium japonicum USDA 110 15 11
Bradyrhizobium sp. BTAi1 15 10
Nitrobacter winogradskyi Nb-255 10 8
Azorhizobium caulinodans ORS 571 11 9
Xanthobacter autotrophicus Py2 14 10
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
uvrB
*
Sinorhizobium meliloti 1021

Site:
position = -60
score = 4.4614
sequence = GTTTCCCTTTTGTAC

Gene: SMc04231: Excinuclease ABC subunit B
*
Rhizobium sp. NGR234

Site:
position = -61
score = 4.4614
sequence = GTTTCCCTTTTGTAC

Gene: NGR_c17500: Excinuclease ABC subunit B
*
Rhizobium leguminosarum bv. viciae 3841

Site:
position = -60
score = 4.4614
sequence = GTTTCCCTTTTGTAC

Gene: RL2957: Excinuclease ABC subunit B
*
Rhizobium etli CFN 42

Site:
position = -162
score = 4.4614
sequence = GTTTCCCTTTTGTAC

Gene: RHE_CH02563: Excinuclease ABC subunit B
*
Agrobacterium tumefaciens str. C58 (Cereon)

Site:
position = -71
score = 4.47792
sequence = GTTTCCTTTTTGTAC

Gene: Atu2001: Excinuclease ABC subunit B
 
Mesorhizobium sp. BNC1

Gene: Meso_2132: Excinuclease ABC subunit B
 
Mesorhizobium loti MAFF303099

Gene: mlr2631: Excinuclease ABC subunit B
 
Brucella melitensis 16M

Gene: BMEI0501: Excinuclease ABC subunit B
 
Bartonella quintana str. Toulouse

Gene: BQ09330: Excinuclease ABC subunit B
 
Rhodopseudomonas palustris CGA009

Gene: RPA4343: Excinuclease ABC subunit B
 
Bradyrhizobium japonicum USDA 110

Gene: blr7431: Excinuclease ABC subunit B
 
Bradyrhizobium sp. BTAi1

Gene: BBta_1782: Excinuclease ABC subunit B
 
Nitrobacter winogradskyi Nb-255

Gene: Nwi_2495: Excinuclease ABC subunit B
*
Azorhizobium caulinodans ORS 571

Site:
position = -61
score = 4.63137
sequence = GGTCCCCTTTTGTTC

Gene: AZC_3127: Excinuclease ABC subunit B
 
Xanthobacter autotrophicus Py2

Gene: Xaut_2744: Excinuclease ABC subunit B
Excinuclease ABC subunit B
 
CRON 2.
uvrA
*
Sinorhizobium meliloti 1021

Site:
position = -143
score = 5.5907
sequence = GTTCTTTTTTTGTTC

Gene: SMc01235: Excinuclease ABC subunit A
*
Rhizobium sp. NGR234

Site:
position = -141
score = 5.46544
sequence = GTTCTTTCTTTGTTC

Gene: NGR_c15570: Excinuclease ABC subunit A
*
Rhizobium leguminosarum bv. viciae 3841

Site:
position = -139
score = 5.55982
sequence = GTTCTTTATTTGTTC

Gene: RL2398: Excinuclease ABC subunit A
*
Rhizobium etli CFN 42

Site:
position = -139
score = 5.55982
sequence = GTTCTTTATTTGTTC

Gene: RHE_CH02107: Excinuclease ABC subunit A
*
Agrobacterium tumefaciens str. C58 (Cereon)

Site:
position = -149
score = 5.41275
sequence = GTTCCTTTTTTGTTC

Gene: Atu1513: Excinuclease ABC subunit A
*
Mesorhizobium sp. BNC1

Site:
position = -175
score = 5.16892
sequence = GTTCGTTCTTTGTTC

Gene: Meso_1396: Excinuclease ABC subunit A
*
Mesorhizobium loti MAFF303099

Site:
position = -167
score = 4.91193
sequence = GTTCGGCCTTTGTTC

Gene: mlr0750: Excinuclease ABC subunit A
*
Brucella melitensis 16M

Site:
position = -156
score = 4.97393
sequence = GTTCGATATTTGTTC

Gene: BMEI0878: Excinuclease ABC subunit A
 
Bartonella quintana str. Toulouse

Gene: BQ07870: Excinuclease ABC subunit A
*
Rhodopseudomonas palustris CGA009

Site:
position = -97
score = 5.1486
sequence = GTTCTTCCTATGTTC

Gene: RPA2816: Excinuclease ABC subunit A
*
Bradyrhizobium japonicum USDA 110

Site:
position = -112
score = 4.80809
sequence = GTTCTTCCTACGTTC

Gene: blr4702: Excinuclease ABC subunit A
*
Bradyrhizobium sp. BTAi1

Site:
position = -108
score = 4.80809
sequence = GTTCTTCCTACGTTC

Gene: BBta_4379: Excinuclease ABC subunit A
*
Nitrobacter winogradskyi Nb-255

Site:
position = -122
score = 4.53524
sequence = GTTCTATCTACGTTC

Gene: Nwi_1568: Excinuclease ABC subunit A
*
Azorhizobium caulinodans ORS 571

Site:
position = -21
score = 5.001
sequence = GTTCTATTTATGTTC

Gene: AZC_2887: Excinuclease ABC subunit A
*
Xanthobacter autotrophicus Py2

Site:
position = -291
score = 5.2176
sequence = GTTCCTGATATGTTC

Gene: Xaut_4315: Excinuclease ABC subunit A
Excinuclease ABC subunit A
 
CRON 3.
parE
*
Sinorhizobium meliloti 1021

Site:
position = -132
score = 4.57618
sequence = ATTCGCCTTTTGTTC

Gene: SMc01018: Topoisomerase IV subunit B (EC 5.99.1.-)
*
Rhizobium sp. NGR234

Site:
position = -134
score = 4.57618
sequence = ATTCGCCTTTTGTTC

Gene: NGR_c12710: Topoisomerase IV subunit B (EC 5.99.1.-)
 
Rhizobium leguminosarum bv. viciae 3841

Gene: RL2515: Topoisomerase IV subunit B (EC 5.99.1.-)
 
Rhizobium etli CFN 42

Gene: RHE_CH02188: Topoisomerase IV subunit B (EC 5.99.1.-)
 
Agrobacterium tumefaciens str. C58 (Cereon)

Gene: Atu1622: Topoisomerase IV subunit B (EC 5.99.1.-)
*
Mesorhizobium sp. BNC1

Site:
position = -88
score = 0.702015
sequence = GAACGGAACCGGAAC

Gene: Meso_1015: Topoisomerase IV subunit B (EC 5.99.1.-)
*
Mesorhizobium loti MAFF303099

Site:
position = -86
score = 1.10289
sequence = GAACGTAACAGGAAC

Gene: mlr0901: Topoisomerase IV subunit B (EC 5.99.1.-)
*
Brucella melitensis 16M

Site:
position = -143
score = 0.979518
sequence = GAACGTAAAGCGAAC

Gene: BMEII0676: Topoisomerase IV subunit B (EC 5.99.1.-)
 
Bartonella quintana str. Toulouse

Gene: BQ06610: Topoisomerase IV subunit B (EC 5.99.1.-)
 
Rhodopseudomonas palustris CGA009

Gene: RPA2486: Topoisomerase IV subunit B (EC 5.99.1.-)
 
Bradyrhizobium japonicum USDA 110

Gene: bll4355: Topoisomerase IV subunit B (EC 5.99.1.-)
 
Bradyrhizobium sp. BTAi1

Gene: BBta_3980: Topoisomerase IV subunit B (EC 5.99.1.-)
 
Nitrobacter winogradskyi Nb-255

Gene: Nwi_1653: Topoisomerase IV subunit B (EC 5.99.1.-)
 
Azorhizobium caulinodans ORS 571

Gene: AZC_2513: Topoisomerase IV subunit B (EC 5.99.1.-)
*
Xanthobacter autotrophicus Py2

Site:
position = -108
score = 4.63864
sequence = GTTTCCGTTCTGTTC

Gene: Xaut_4757: Topoisomerase IV subunit B (EC 5.99.1.-)
Topoisomerase IV subunit B (EC 5.99.1.-)
 
CRON 4.
rmuC
*
Sinorhizobium meliloti 1021

Site:
position = -49
score = 5.21722
sequence = GTTCTCGTTTTGATC

Gene: SMc01102: DNA recombination protein RmuC
*
Rhizobium sp. NGR234

Site:
position = -50
score = 5.34557
sequence = GTTCTTGTTTTGATC

Gene: NGR_c00550: DNA recombination protein RmuC
*
Rhizobium leguminosarum bv. viciae 3841

Site:
position = -49
score = 5.00785
sequence = GTTCACGTTTTGATC

Gene: RL0428: DNA recombination protein RmuC
*
Rhizobium etli CFN 42

Site:
position = -235
score = 5.00785
sequence = GTTCACGTTTTGATC

Gene: RHE_CH00410: DNA recombination protein RmuC
*
Agrobacterium tumefaciens str. C58 (Cereon)

Site:
position = -9
score = 5.34557
sequence = GTTCTTGTTTTGATC

Gene: Atu0365: DNA recombination protein RmuC
*
Mesorhizobium sp. BNC1

Site:
position = -51
score = 4.97697
sequence = GTTCACGATTTGATC

Gene: Meso_0418: DNA recombination protein RmuC
*
Mesorhizobium loti MAFF303099

Site:
position = -16
score = 5.00785
sequence = GTTCACGTTTTGATC

Gene: mlr4857: DNA recombination protein RmuC
*
Brucella melitensis 16M

Site:
position = -251
score = 5.16763
sequence = GTTCCTGTTTTGATC

Gene: BMEII0263: DNA recombination protein RmuC
 
Bartonella quintana str. Toulouse

Gene: BQ00700: DNA recombination protein RmuC
*
Rhodopseudomonas palustris CGA009

Site:
position = -18
score = 4.83557
sequence = GTTCTATCTTCGTTC

Gene: RPA0620: DNA recombination protein RmuC
*
Bradyrhizobium japonicum USDA 110

Site:
position = -15
score = 4.79445
sequence = GTTCGCTATTCGTTC

Gene: blr8110: DNA recombination protein RmuC
*
Bradyrhizobium sp. BTAi1

Site:
position = -47
score = 5.09097
sequence = GTTCTCTATTCGTTC

Gene: BBta_7338: DNA recombination protein RmuC
 
Nitrobacter winogradskyi Nb-255
*
Azorhizobium caulinodans ORS 571

Site:
position = -44
score = 4.85416
sequence = GTTCGCTGTTTGTTC

Gene: AZC_0799: DNA recombination protein RmuC
*
Xanthobacter autotrophicus Py2

Site:
position = -42
score = 4.85416
sequence = GTTCGCTGTTTGTTC

Gene: Xaut_3306: DNA recombination protein RmuC
DNA recombination protein RmuC
 
CRON 5.
dnaE
*
Sinorhizobium meliloti 1021

Site:
position = -273
score = 0.502482
sequence = GAACAAAAAGGGAAC

Gene: SMc01375: DNA polymerase III alpha subunit (EC 2.7.7.7)
*
Rhizobium sp. NGR234

Site:
position = -254
score = 0.805834
sequence = GAACAAAAAAAGAAC

Gene: NGR_c10730: DNA polymerase III alpha subunit (EC 2.7.7.7)
*
Rhizobium leguminosarum bv. viciae 3841

Site:
position = -241
score = 0.224593
sequence = GAACAAATTGAAAAC

Gene: RL1723: DNA polymerase III alpha subunit (EC 2.7.7.7)
*
Rhizobium etli CFN 42

Site:
position = -253
score = 1.10662
sequence = GAACAAACATGGAAC

Gene: RHE_CH01627: DNA polymerase III alpha subunit (EC 2.7.7.7)
*
Agrobacterium tumefaciens str. C58 (Cereon)

Site:
position = -239
score = 0.927057
sequence = GAACAAAATGAGAAC

Gene: Atu1292: DNA polymerase III alpha subunit (EC 2.7.7.7)
 
Mesorhizobium sp. BNC1

Gene: Meso_1255: DNA polymerase III alpha subunit (EC 2.7.7.7)
 
Mesorhizobium loti MAFF303099

Gene: mll0870: DNA polymerase III alpha subunit (EC 2.7.7.7)
 
Brucella melitensis 16M

Gene: BMEI1137: DNA polymerase III alpha subunit (EC 2.7.7.7)
 
Bartonella quintana str. Toulouse

Gene: BQ07620: DNA polymerase III alpha subunit (EC 2.7.7.7)
 
Rhodopseudomonas palustris CGA009

Gene: RPA2924: DNA polymerase III alpha subunit (EC 2.7.7.7)
 
Bradyrhizobium japonicum USDA 110

Gene: bll4866: DNA polymerase III alpha subunit (EC 2.7.7.7)
 
Bradyrhizobium sp. BTAi1

Gene: BBta_4522: DNA polymerase III alpha subunit (EC 2.7.7.7)
*
Nitrobacter winogradskyi Nb-255

Site:
position = -294
score = 0.533363
sequence = GAACAAATAGGGAAC

Gene: Nwi_1860: DNA polymerase III alpha subunit (EC 2.7.7.7)
 
Azorhizobium caulinodans ORS 571

Gene: AZC_1691: DNA polymerase III alpha subunit (EC 2.7.7.7)
 
Xanthobacter autotrophicus Py2

Gene: Xaut_4284: DNA polymerase III alpha subunit (EC 2.7.7.7)
DNA polymerase III alpha subunit (EC 2.7.7.7)
 
CRON 6.
rna
*2
Sinorhizobium meliloti 1021

Gene: SMc00606: Ribonuclease T2

Site:
position = -36
score = 5.30689
sequence = GTTCCTGTTTTGTTT

Gene: SMc02819: Ribonuclease T2
*2
Rhizobium sp. NGR234

Gene: NGR_c09240: Ribonuclease T2

Site:
position = -30
score = 5.05616
sequence = GTTCTCGTTATGTTT

Gene: NGR_c21340: Ribonuclease T2
*
Rhizobium leguminosarum bv. viciae 3841

Site:
position = 10
score = 5.0294
sequence = GTTCCTGTATTGTTC

Gene: RL3334: Ribonuclease T2
*
Rhizobium etli CFN 42

Site:
position = -31
score = 4.90414
sequence = GTTCCTGCATTGTTC

Gene: RHE_CH02874: Ribonuclease T2
 
Agrobacterium tumefaciens str. C58 (Cereon)

Gene: Atu1133: Ribonuclease T2
 
Mesorhizobium sp. BNC1

Gene: Meso_1972: Ribonuclease T2
 
Mesorhizobium loti MAFF303099

Gene: mll1611: Ribonuclease T2
 
Brucella melitensis 16M

Gene: BMEI1247: Ribonuclease T2
 
Bartonella quintana str. Toulouse
*
Rhodopseudomonas palustris CGA009

Site:
position = -63
score = 4.53564
sequence = GTTCTTGAAACGTTC

Gene: RPA4380: Ribonuclease T2
*
Bradyrhizobium japonicum USDA 110

Site:
position = -63
score = 4.87614
sequence = GTTCTTGAAATGTTC

Gene: blr7466: Ribonuclease T2
*
Bradyrhizobium sp. BTAi1

Site:
position = -57
score = 4.87614
sequence = GTTCTTGAAATGTTC

Gene: BBta_1732: Ribonuclease T2
 
Nitrobacter winogradskyi Nb-255

Gene: Nwi_2529: Ribonuclease T2
 
Azorhizobium caulinodans ORS 571

Gene: AZC_3138: Ribonuclease T2
 
Xanthobacter autotrophicus Py2

Gene: Xaut_2731: Ribonuclease T2
Ribonuclease T2
 
CRON 7.
dinP
*
Sinorhizobium meliloti 1021

Site:
position = -9
score = 4.59594
sequence = GTTCCGGATATGATC

Site:
position = -20
score = 5.04457
sequence = GTTCAACATTTGTTC

Gene: SMc01373: DNA polymerase IV (EC 2.7.7.7)
*
Rhizobium sp. NGR234

Site:
position = -143
score = 5.04457
sequence = GTTCAACATTTGTTC

Gene: NGR_c10750: DNA polymerase IV (EC 2.7.7.7)
*
Rhizobium leguminosarum bv. viciae 3841

Site:
position = -122
score = 4.9667
sequence = GTTCAATCTTTGTTC

Gene: RL1725: DNA polymerase IV (EC 2.7.7.7)
*
Rhizobium etli CFN 42

Site:
position = -20
score = 4.95019
sequence = GTTCAACCTTTGTTC

Gene: RHE_CH01629: DNA polymerase IV (EC 2.7.7.7)
*
Agrobacterium tumefaciens str. C58 (Cereon)

Site:
position = -88
score = 5.24437
sequence = GTTCTGGTTTTGTTT

Gene: Atu1294: DNA polymerase IV (EC 2.7.7.7)
*
Mesorhizobium sp. BNC1

Site:
position = -27
score = 5.27386
sequence = GTTCTTCTTATGTTC

Gene: Meso_1344: DNA polymerase IV (EC 2.7.7.7)
*
Mesorhizobium loti MAFF303099

Site:
position = -21
score = 5.16202
sequence = GTTCTCTTTATGTTC

Gene: mlr0866: DNA polymerase IV (EC 2.7.7.7)
*
Brucella melitensis 16M

Site:
position = -35
score = 5.11243
sequence = GTTCCTTTTATGTTC

Gene: BMEII0656: DNA polymerase IV (EC 2.7.7.7)
 
Bartonella quintana str. Toulouse
 
Rhodopseudomonas palustris CGA009

Gene: RPA3135: DNA polymerase IV (EC 2.7.7.7)
 
Bradyrhizobium japonicum USDA 110

Gene: blr5126: DNA polymerase IV (EC 2.7.7.7)
 
Bradyrhizobium sp. BTAi1

Gene: BBta_4749: DNA polymerase IV (EC 2.7.7.7)
 
Nitrobacter winogradskyi Nb-255

Gene: Nwi_1429: DNA polymerase IV (EC 2.7.7.7)
 
Azorhizobium caulinodans ORS 571

Gene: AZC_1852: DNA polymerase IV (EC 2.7.7.7)
 
Xanthobacter autotrophicus Py2

Gene: Xaut_3857: DNA polymerase IV (EC 2.7.7.7)
DNA polymerase IV (EC 2.7.7.7)
 
CRON 8.
PF04055
*
Sinorhizobium meliloti 1021

Site:
position = -79
score = 5.69588
sequence = GTTCTTGATTTGTTC

Gene: SMc00866: Radical SAM domain protein
*
Rhizobium sp. NGR234

Site:
position = -81
score = 5.6015
sequence = GTTCTTGCTTTGTTC

Gene: NGR_c04530: Radical SAM domain protein
*
Rhizobium leguminosarum bv. viciae 3841

Site:
position = -85
score = 5.08209
sequence = GTTCTTGCATTGTTC

Gene: RL0931: Radical SAM domain protein
*
Rhizobium etli CFN 42

Site:
position = -85
score = 5.08209
sequence = GTTCTTGCATTGTTC

Gene: RHE_CH00869: Radical SAM domain protein
*
Agrobacterium tumefaciens str. C58 (Cereon)

Site:
position = -179
score = 5.20735
sequence = GTTCTTGTATTGTTC

Gene: Atu0721: Radical SAM domain protein
*
Mesorhizobium sp. BNC1

Site:
position = -77
score = 5.69588
sequence = GTTCTTGATTTGTTC

Gene: Meso_0704: Radical SAM domain protein
*
Mesorhizobium loti MAFF303099

Site:
position = -175
score = 5.6015
sequence = GTTCTTGCTTTGTTC

Gene: mll7417: Radical SAM domain protein
*
Brucella melitensis 16M

Site:
position = -85
score = 5.69588
sequence = GTTCTTGATTTGTTC

Gene: BMEI1541: Radical SAM domain protein
 
Bartonella quintana str. Toulouse
*
Rhodopseudomonas palustris CGA009

Site:
position = -38
score = 5.69588
sequence = GTTCTTGATTTGTTC

Gene: RPA1033: Radical SAM domain protein
*
Bradyrhizobium japonicum USDA 110

Site:
position = -38
score = 5.69588
sequence = GTTCTTGATTTGTTC

Gene: blr2519: Radical SAM domain protein
*
Bradyrhizobium sp. BTAi1

Site:
position = -98
score = 4.90702
sequence = GTTCTTGTAATGTTC

Gene: BBta_2341: Radical SAM domain protein
*
Nitrobacter winogradskyi Nb-255

Site:
position = -38
score = 5.6015
sequence = GTTCTTGCTTTGTTC

Gene: Nwi_2600: Radical SAM domain protein
*
Azorhizobium caulinodans ORS 571

Site:
position = 2
score = 5.38626
sequence = GTTCTTGTTTCGTTC

Gene: AZC_0428: Radical SAM domain protein
*
Xanthobacter autotrophicus Py2

Site:
position = -40
score = 5.38626
sequence = GTTCTTGTTTCGTTC

Gene: Xaut_1946: Radical SAM domain protein
Radical SAM domain protein
 
CRON 9.
yifB
*
Sinorhizobium meliloti 1021

Site:
position = -153
score = 4.65666
sequence = GTTCTATCATTGTTC

Gene: SMc00420: Conserved hypothetical protein
*
Rhizobium sp. NGR234

Site:
position = -97
score = 4.78192
sequence = GTTCTATTATTGTTC

Gene: NGR_c36840: Conserved hypothetical protein
*
Rhizobium leguminosarum bv. viciae 3841

Site:
position = -94
score = 4.99341
sequence = GTTCTTGTTTTATTC

Site:
position = -105
score = 4.58167
sequence = GTTCCTTGATTGTTC

Gene: RL0339: Conserved hypothetical protein
*
Rhizobium etli CFN 42

Site:
position = -94
score = 4.99341
sequence = GTTCTTGTTTTATTC

Gene: RHE_CH00323: Conserved hypothetical protein
*
Agrobacterium tumefaciens str. C58 (Cereon)

Site:
position = -97
score = 4.99341
sequence = GTTCTTGTTTTATTC

Site:
position = -170
score = 4.37744
sequence = GCTCCCGGTTTGTTC

Gene: Atu0311: Conserved hypothetical protein
*
Mesorhizobium sp. BNC1

Site:
position = -77
score = 4.85396
sequence = GTTCTTGATCTGATC

Gene: Meso_3583: Conserved hypothetical protein
 
Mesorhizobium loti MAFF303099
 
Brucella melitensis 16M
 
Bartonella quintana str. Toulouse

Gene: BQ00390: Conserved hypothetical protein
*
Rhodopseudomonas palustris CGA009

Site:
position = -67
score = 4.43324
sequence = GTTCACTTAATGTTC

Gene: RPA0318: Conserved hypothetical protein
*
Bradyrhizobium japonicum USDA 110

Site:
position = -74
score = 4.90106
sequence = GTTCCCGTATTGTTC

Gene: bll0661: Conserved hypothetical protein
*
Bradyrhizobium sp. BTAi1

Site:
position = -62
score = 5.08209
sequence = GTTCTTGCATTGTTC

Gene: BBta_0136: Conserved hypothetical protein
*
Nitrobacter winogradskyi Nb-255

Site:
position = -67
score = 4.64261
sequence = GTTCTCTTAATGTTC

Gene: Nwi_0118: Conserved hypothetical protein
*
Azorhizobium caulinodans ORS 571

Site:
position = -80
score = 4.28015
sequence = GTTCGCAATCTGTTC

Gene: AZC_4342: Conserved hypothetical protein
*
Xanthobacter autotrophicus Py2

Site:
position = -75
score = 4.81526
sequence = GTTCCGCTTTCGTTC

Gene: Xaut_0335: Conserved hypothetical protein
Conserved hypothetical protein
 
CRON 10.
ruvC
*
Sinorhizobium meliloti 1021

Site:
position = -58
score = 5.40566
sequence = GTTTTTGTTTTGTTC

Gene: SMc03967: Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4)
*
Rhizobium sp. NGR234

Site:
position = -58
score = 5.40566
sequence = GTTTTTGTTTTGTTC

Gene: NGR_c27930: Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4)
*
Rhizobium leguminosarum bv. viciae 3841

Site:
position = -58
score = 5.40566
sequence = GTTTTTGTTTTGTTC

Gene: RL3986: Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4)
*
Rhizobium etli CFN 42

Site:
position = -59
score = 5.40566
sequence = GTTTTTGTTTTGTTC

Gene: RHE_CH03478: Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4)
*
Agrobacterium tumefaciens str. C58 (Cereon)

Site:
position = -58
score = 5.04903
sequence = GTTGTCGTTTTGTTC

Gene: Atu3724: Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4)
 
Mesorhizobium sp. BNC1

Gene: Meso_3179: Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4)
*
Mesorhizobium loti MAFF303099

Site:
position = -58
score = 4.7877
sequence = GTTTCCGGTTTGTTC

Gene: mll3901: Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4)
*
Brucella melitensis 16M

Site:
position = -60
score = 5.07514
sequence = GTTTCTCTTTTGTTC

Gene: BMEI0332: Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4)
 
Bartonella quintana str. Toulouse

Gene: BQ11890: Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4)
*
Rhodopseudomonas palustris CGA009

Site:
position = -44
score = 4.4693
sequence = GTTGCTATTTTGTTC

Gene: RPA1099: Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4)
*
Bradyrhizobium japonicum USDA 110

Site:
position = -47
score = 4.64758
sequence = GTTCTGTTTCTGTTT

Gene: blr1535: Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4)
*
Bradyrhizobium sp. BTAi1

Site:
position = -47
score = 4.63003
sequence = GTTCCGTTTATGTTT

Gene: BBta_6909: Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4)
 
Nitrobacter winogradskyi Nb-255

Gene: Nwi_2726: Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4)
 
Azorhizobium caulinodans ORS 571

Gene: AZC_0513: Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4)
 
Xanthobacter autotrophicus Py2

Gene: Xaut_3065: Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4)
Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4)
ruvA
 
Sinorhizobium meliloti 1021

Gene: SMc03966: Holliday junction DNA helicase RuvA
 
Rhizobium sp. NGR234

Gene: NGR_c27920: Holliday junction DNA helicase RuvA
 
Rhizobium leguminosarum bv. viciae 3841

Gene: RL3989: Holliday junction DNA helicase RuvA
 
Rhizobium etli CFN 42

Gene: RHE_CH03481: Holliday junction DNA helicase RuvA
 
Agrobacterium tumefaciens str. C58 (Cereon)

Gene: Atu3723: Holliday junction DNA helicase RuvA
 
Mesorhizobium sp. BNC1

Gene: Meso_3178: Holliday junction DNA helicase RuvA
 
Mesorhizobium loti MAFF303099

Gene: mll3898: Holliday junction DNA helicase RuvA
 
Brucella melitensis 16M

Gene: BMEI0333: Holliday junction DNA helicase RuvA
 
Bartonella quintana str. Toulouse

Gene: BQ11880: Holliday junction DNA helicase RuvA
 
Rhodopseudomonas palustris CGA009

Gene: RPA1100: Holliday junction DNA helicase RuvA
 
Bradyrhizobium japonicum USDA 110

Gene: blr1536: Holliday junction DNA helicase RuvA
 
Bradyrhizobium sp. BTAi1

Gene: BBta_6908: Holliday junction DNA helicase RuvA
 
Nitrobacter winogradskyi Nb-255

Gene: Nwi_2725: Holliday junction DNA helicase RuvA
 
Azorhizobium caulinodans ORS 571

Gene: AZC_0515: Holliday junction DNA helicase RuvA
 
Xanthobacter autotrophicus Py2

Gene: Xaut_3067: Holliday junction DNA helicase RuvA
Holliday junction DNA helicase RuvA
cdd
 
Sinorhizobium meliloti 1021
 
Rhizobium sp. NGR234
 
Rhizobium leguminosarum bv. viciae 3841
 
Rhizobium etli CFN 42
 
Agrobacterium tumefaciens str. C58 (Cereon)
 
Mesorhizobium sp. BNC1
 
Mesorhizobium loti MAFF303099
 
Brucella melitensis 16M
 
Bartonella quintana str. Toulouse
 
Rhodopseudomonas palustris CGA009

Gene: RPA1101: Cytidine deaminase (EC 3.5.4.5)
 
Bradyrhizobium japonicum USDA 110
 
Bradyrhizobium sp. BTAi1

Gene: BBta_6907: Cytidine deaminase (EC 3.5.4.5)
 
Nitrobacter winogradskyi Nb-255
 
Azorhizobium caulinodans ORS 571
 
Xanthobacter autotrophicus Py2
Cytidine deaminase (EC 3.5.4.5)
ruvB
 
Sinorhizobium meliloti 1021

Gene: SMc03965: Holliday junction DNA helicase RuvB
 
Rhizobium sp. NGR234

Gene: NGR_c27910: Holliday junction DNA helicase RuvB
 
Rhizobium leguminosarum bv. viciae 3841

Gene: RL3990: Holliday junction DNA helicase RuvB
 
Rhizobium etli CFN 42

Gene: RHE_CH03482: Holliday junction DNA helicase RuvB
 
Agrobacterium tumefaciens str. C58 (Cereon)

Gene: Atu3722: Holliday junction DNA helicase RuvB
 
Mesorhizobium sp. BNC1

Gene: Meso_3176: Holliday junction DNA helicase RuvB
 
Mesorhizobium loti MAFF303099

Gene: mll3895: Holliday junction DNA helicase RuvB
 
Brucella melitensis 16M

Gene: BMEI0334: Holliday junction DNA helicase RuvB
 
Bartonella quintana str. Toulouse

Gene: BQ11870: Holliday junction DNA helicase RuvB
 
Rhodopseudomonas palustris CGA009

Gene: RPA1102: Holliday junction DNA helicase RuvB
 
Bradyrhizobium japonicum USDA 110

Gene: blr1537: Holliday junction DNA helicase RuvB
 
Bradyrhizobium sp. BTAi1

Gene: BBta_6906: Holliday junction DNA helicase RuvB
 
Nitrobacter winogradskyi Nb-255

Gene: Nwi_2724: Holliday junction DNA helicase RuvB
 
Azorhizobium caulinodans ORS 571

Gene: AZC_0519: Holliday junction DNA helicase RuvB
 
Xanthobacter autotrophicus Py2
Holliday junction DNA helicase RuvB
 
CRON 11.
greA
 
Sinorhizobium meliloti 1021

Gene: SMc01218: Transcription elongation factor GreA
 
Rhizobium sp. NGR234

Gene: NGR_c15720: Transcription elongation factor GreA
*
Rhizobium leguminosarum bv. viciae 3841

Site:
position = -247
score = 4.92177
sequence = GTTCACTATATGTTC

Gene: RL3422: Transcription elongation factor GreA
*
Rhizobium etli CFN 42

Site:
position = -246
score = 4.92177
sequence = GTTCACTATATGTTC

Gene: RHE_CH02969: Transcription elongation factor GreA
*
Agrobacterium tumefaciens str. C58 (Cereon)

Site:
position = -215
score = 4.92177
sequence = GTTCACTATATGTTC

Gene: Atu2182: Transcription elongation factor GreA
*
Mesorhizobium sp. BNC1

Site:
position = -58
score = 4.27099
sequence = GTTTTCTTTTTGTGT

Gene: Meso_2118: Transcription elongation factor GreA
*
Mesorhizobium loti MAFF303099

Site:
position = -71
score = 4.65586
sequence = GTTTTCTTTTTGTAC

Gene: mll2568: Transcription elongation factor GreA
*
Brucella melitensis 16M

Site:
position = -149
score = 4.27099
sequence = GTTTTCTTTTTGTGT

Gene: BMEI0508: Transcription elongation factor GreA
 
Bartonella quintana str. Toulouse

Gene: BQ09310: Transcription elongation factor GreA
 
Rhodopseudomonas palustris CGA009

Gene: RPA4072: Transcription elongation factor GreA
 
Bradyrhizobium japonicum USDA 110

Gene: blr7378: Transcription elongation factor GreA
 
Bradyrhizobium sp. BTAi1

Gene: BBta_6800: Transcription elongation factor GreA
 
Nitrobacter winogradskyi Nb-255

Gene: Nwi_2450: Transcription elongation factor GreA
 
Azorhizobium caulinodans ORS 571

Gene: AZC_1146: Transcription elongation factor GreA
 
Xanthobacter autotrophicus Py2

Gene: Xaut_2751: Transcription elongation factor GreA
Transcription elongation factor GreA
 
CRON 12.
uvrD2
*
Sinorhizobium meliloti 1021

Site:
position = -59
score = 4.3414
sequence = GTTCCCCCTCCGTTC

Gene: SMa2321: ATP-dependent DNA helicase II
*
Rhizobium sp. NGR234

Site:
position = -90
score = 4.58064
sequence = GTTCCTTATCCGTTC

Gene: NGR_b14150: ATP-dependent DNA helicase II
*
Rhizobium leguminosarum bv. viciae 3841

Site:
position = -63
score = 1.48973
sequence = GAACATTCAAGGAAC

Gene: RL0607: ATP-dependent DNA helicase II
*
Rhizobium etli CFN 42

Site:
position = -63
score = 1.48973
sequence = GAACATTCAAGGAAC

Gene: RHE_CH00573: ATP-dependent DNA helicase II
*
Agrobacterium tumefaciens str. C58 (Cereon)

Site:
position = -134
score = 5.09346
sequence = GTTCAGCATTTGTTC

Gene: Atu4619: ATP-dependent DNA helicase II
 
Mesorhizobium sp. BNC1
*
Mesorhizobium loti MAFF303099

Site:
position = -30
score = -0.511652
sequence = GAACAAAGCGGAAAC

Gene: mlr7946: ATP-dependent DNA helicase II
 
Brucella melitensis 16M
 
Bartonella quintana str. Toulouse
*
Rhodopseudomonas palustris CGA009

Site:
position = -53
score = 0.37796
sequence = GAACAAAGCAGGAAT

Gene: RPA2802: ATP-dependent DNA helicase II
 
Bradyrhizobium japonicum USDA 110

Gene: blr5493: ATP-dependent DNA helicase II
 
Bradyrhizobium sp. BTAi1

Gene: BBta_7513: ATP-dependent DNA helicase II
 
Nitrobacter winogradskyi Nb-255
 
Azorhizobium caulinodans ORS 571
 
Xanthobacter autotrophicus Py2
ATP-dependent DNA helicase II
 
CRON 13.
recA
*
Sinorhizobium meliloti 1021

Site:
position = -73
score = 1.89717
sequence = GAACAAAACATGTAC

Site:
position = -141
score = 2.00595
sequence = GAACAAGAATCGAAC

Gene: SMc00760: Recombinase A
*
Rhizobium sp. NGR234

Site:
position = -74
score = 1.89717
sequence = GAACAAAACATGTAC

Site:
position = -142
score = 2.05484
sequence = GAACAGGAATCGAAC

Gene: NGR_c16470: Recombinase A
*
Rhizobium leguminosarum bv. viciae 3841

Site:
position = -62
score = 0.91455
sequence = GAACAAATAGGGTAC

Site:
position = -130
score = -0.0984924
sequence = AAACAAATGCAGAAC

Gene: RL2637: Recombinase A
*
Rhizobium etli CFN 42

Site:
position = -62
score = 0.712885
sequence = GAACAAATGGGGTAC

Site:
position = -130
score = 0.362236
sequence = AAACAAATGTAGAAC

Gene: RHE_CH02323: Recombinase A
*
Agrobacterium tumefaciens str. C58 (Cereon)

Site:
position = -74
score = 0.819715
sequence = GAACAAATAGAGTAC

Site:
position = -142
score = -0.216521
sequence = AAACGAAAGCAGAAC

Gene: Atu1874: Recombinase A
*
Mesorhizobium sp. BNC1

Site:
position = -73
score = 0.883669
sequence = GAACAAAACGGGTAC

Site:
position = -140
score = 0.602342
sequence = AAACAAAAAACGAAC

Gene: Meso_1263: Recombinase A
*
Mesorhizobium loti MAFF303099

Site:
position = -73
score = 1.28186
sequence = GAACAAAAAAGGTAC

Site:
position = -139
score = 1.45004
sequence = GTACGAAAAAAGAAC

Gene: mlr0030: Recombinase A
*
Brucella melitensis 16M

Site:
position = -73
score = 0.548511
sequence = GAACAAAACAGATAC

Site:
position = -138
score = 1.73113
sequence = GAACAAGAATGGAAC

Gene: BMEI0787: Recombinase A
 
Bartonella quintana str. Toulouse

Gene: BQ07950: Recombinase A
*
Rhodopseudomonas palustris CGA009

Site:
position = -102
score = 1.61696
sequence = GAACATATTGCGAAC

Site:
position = -84
score = 0.712885
sequence = GAACAAATGGGGTAC

Gene: RPA3851: Recombinase A
*
Bradyrhizobium japonicum USDA 110

Site:
position = -90
score = 0.91455
sequence = GAACAAATAGGGTAC

Site:
position = -108
score = 1.61696
sequence = GAACATATTGCGAAC

Gene: bll5755: Recombinase A
*
Bradyrhizobium sp. BTAi1

Site:
position = -89
score = 0.963444
sequence = GAACAGATCGGGTAC

Site:
position = -107
score = 1.61696
sequence = GAACATATTGCGAAC

Gene: BBta_5453: Recombinase A
*
Nitrobacter winogradskyi Nb-255

Site:
position = -106
score = 1.61696
sequence = GAACATATTGCGAAC

Site:
position = -88
score = 0.712885
sequence = GAACAAATGGGGTAC

Gene: Nwi_1280: Recombinase A
*
Azorhizobium caulinodans ORS 571

Site:
position = -61
score = 1.11107
sequence = GAACAAATGAGGTAC

Site:
position = -79
score = 1.61696
sequence = GAACATATTGCGAAC

Gene: AZC_2855: Recombinase A
*
Xanthobacter autotrophicus Py2

Site:
position = -62
score = 1.61638
sequence = GAACAAAGCATGTAC

Site:
position = -80
score = 1.61696
sequence = GAACATATTGCGAAC

Gene: Xaut_4080: Recombinase A
Recombinase A
 
CRON 14.
PF01443
 
Sinorhizobium meliloti 1021

Gene: SMc01414: RecD-like DNA helicase Atu2026
 
Rhizobium sp. NGR234

Gene: NGR_c20050: RecD-like DNA helicase Atu2026
 
Rhizobium leguminosarum bv. viciae 3841

Gene: RL3224: RecD-like DNA helicase Atu2026
 
Rhizobium etli CFN 42

Gene: RHE_CH02771: RecD-like DNA helicase Atu2026
*
Agrobacterium tumefaciens str. C58 (Cereon)

Site:
position = -58
score = 4.45117
sequence = ATTCATCTTTCGTTC

Gene: Atu2026: RecD-like DNA helicase Atu2026
 
Mesorhizobium sp. BNC1

Gene: Meso_1491: RecD-like DNA helicase Atu2026
*
Mesorhizobium loti MAFF303099

Site:
position = -122
score = 4.64357
sequence = GTTCCCTTTACGTTC

Gene: mll1421: RecD-like DNA helicase Atu2026
 
Brucella melitensis 16M

Gene: BMEI0619: RecD-like DNA helicase Atu2026
 
Bartonella quintana str. Toulouse

Gene: BQ08560: RecD-like DNA helicase Atu2026
 
Rhodopseudomonas palustris CGA009

Gene: RPA1273: RecD-like DNA helicase Atu2026
 
Bradyrhizobium japonicum USDA 110

Gene: blr7041: RecD-like DNA helicase Atu2026
 
Bradyrhizobium sp. BTAi1

Gene: BBta_1859: RecD-like DNA helicase Atu2026
 
Nitrobacter winogradskyi Nb-255

Gene: Nwi_0594: RecD-like DNA helicase Atu2026
 
Azorhizobium caulinodans ORS 571
 
Xanthobacter autotrophicus Py2
RecD-like DNA helicase Atu2026
 
CRON 15.
xthA
 
Sinorhizobium meliloti 1021

Gene: SMc02077: Exodeoxyribonuclease III (EC 3.1.11.2)
 
Rhizobium sp. NGR234

Gene: NGR_c13610: Exodeoxyribonuclease III (EC 3.1.11.2)
 
Rhizobium leguminosarum bv. viciae 3841

Gene: RL2038: Exodeoxyribonuclease III (EC 3.1.11.2)
 
Rhizobium etli CFN 42

Gene: RHE_CH01815: Exodeoxyribonuclease III (EC 3.1.11.2)
 
Agrobacterium tumefaciens str. C58 (Cereon)

Gene: Atu1714: Exodeoxyribonuclease III (EC 3.1.11.2)
*
Mesorhizobium sp. BNC1

Site:
position = -17
score = 4.48656
sequence = GTTCTGGATTCGTGC

Gene: Meso_1686: Exodeoxyribonuclease III (EC 3.1.11.2)
 
Mesorhizobium loti MAFF303099

Gene: mlr1096: Exodeoxyribonuclease III (EC 3.1.11.2)
 
Brucella melitensis 16M

Gene: BMEI1093: Exodeoxyribonuclease III (EC 3.1.11.2)
 
Bartonella quintana str. Toulouse

Gene: BQ08290: Exodeoxyribonuclease III (EC 3.1.11.2)
 
Rhodopseudomonas palustris CGA009

Gene: RPA2861: Exodeoxyribonuclease III (EC 3.1.11.2)
*
Bradyrhizobium japonicum USDA 110

Site:
position = -21
score = 4.45067
sequence = GTTTGCATTTTGTTC

Gene: blr4761: Exodeoxyribonuclease III (EC 3.1.11.2)
 
Bradyrhizobium sp. BTAi1

Gene: BBta_4438: Exodeoxyribonuclease III (EC 3.1.11.2)
 
Nitrobacter winogradskyi Nb-255

Gene: Nwi_1810: Exodeoxyribonuclease III (EC 3.1.11.2)
 
Azorhizobium caulinodans ORS 571

Gene: AZC_2812: Exodeoxyribonuclease III (EC 3.1.11.2)
 
Xanthobacter autotrophicus Py2

Gene: Xaut_4240: Exodeoxyribonuclease III (EC 3.1.11.2)
Exodeoxyribonuclease III (EC 3.1.11.2)
 
CRON 16.
mgpS
 
Sinorhizobium meliloti 1021

Gene: SMc03877: ATP-dependent helicase
 
Rhizobium sp. NGR234

Gene: NGR_c32700: ATP-dependent helicase
*
Rhizobium leguminosarum bv. viciae 3841

Site:
position = -224
score = 0.912004
sequence = GAACAAAAGCTGAAT

Gene: RL4618: ATP-dependent helicase
*
Rhizobium etli CFN 42

Site:
position = -244
score = 0.912004
sequence = GAACAAAAGCTGAAT

Gene: RHE_CH04022: ATP-dependent helicase
*
Agrobacterium tumefaciens str. C58 (Cereon)

Site:
position = -291
score = 0.498349
sequence = GAACAAAAACGGAAT

Gene: Atu2753: ATP-dependent helicase
*
Mesorhizobium sp. BNC1

Site:
position = -175
score = 0.403514
sequence = GAACAAAAACAGAAT

Gene: Meso_3376: ATP-dependent helicase
 
Mesorhizobium loti MAFF303099

Gene: mlr3852: ATP-dependent helicase
*
Brucella melitensis 16M

Site:
position = -220
score = -0.0197774
sequence = GAACAAATACAGAAA

Gene: BMEI0275: ATP-dependent helicase
*
Bartonella quintana str. Toulouse

Site:
position = -60
score = 1.27407
sequence = GAACAAAAAATGAAT

Gene: BQ12130: ATP-dependent helicase
 
Rhodopseudomonas palustris CGA009

Gene: RPA0491: ATP-dependent helicase
 
Bradyrhizobium japonicum USDA 110

Gene: bll0159: ATP-dependent helicase
 
Bradyrhizobium sp. BTAi1

Gene: BBta_7546: ATP-dependent helicase
 
Nitrobacter winogradskyi Nb-255

Gene: Nwi_0409: ATP-dependent helicase
 
Azorhizobium caulinodans ORS 571

Gene: AZC_0230: ATP-dependent helicase
 
Xanthobacter autotrophicus Py2

Gene: Xaut_2639: ATP-dependent helicase
ATP-dependent helicase
 
CRON 17.
uvrD
*
Sinorhizobium meliloti 1021

Site:
position = -58
score = 0.283074
sequence = GAATAAAAGAAGAAC

Gene: SMc01461: ATP-dependent DNA helicase II
*
Rhizobium sp. NGR234

Site:
position = -58
score = 0.283074
sequence = GAATAAAAGAAGAAC

Gene: NGR_c20770: ATP-dependent DNA helicase II
*
Rhizobium leguminosarum bv. viciae 3841

Site:
position = -58
score = 0.0355262
sequence = GAATGAAAGCAGAAC

Gene: RL3276: ATP-dependent DNA helicase II
*
Rhizobium etli CFN 42

Site:
position = -109
score = 0.0355262
sequence = GAATGAAAGCAGAAC

Gene: RHE_CH02819: ATP-dependent DNA helicase II
*
Agrobacterium tumefaciens str. C58 (Cereon)

Site:
position = -57
score = 0.122673
sequence = GAATAAAAGCAGAAC

Gene: Atu2057: ATP-dependent DNA helicase II
*
Mesorhizobium sp. BNC1

Site:
position = -54
score = 0.40566
sequence = GTACAAAAAGAAAAC

Gene: Meso_1988: ATP-dependent DNA helicase II
*
Mesorhizobium loti MAFF303099

Site:
position = -142
score = 0.0488569
sequence = GAACAAAACGTAGAC

Gene: mlr1503: ATP-dependent DNA helicase II
 
Brucella melitensis 16M

Gene: BMEI0596: ATP-dependent DNA helicase II
 
Bartonella quintana str. Toulouse

Gene: BQ08710: ATP-dependent DNA helicase II
 
Rhodopseudomonas palustris CGA009

Gene: RPA3506: ATP-dependent DNA helicase II
 
Bradyrhizobium japonicum USDA 110

Gene: blr6561: ATP-dependent DNA helicase II
 
Bradyrhizobium sp. BTAi1

Gene: BBta_6141: ATP-dependent DNA helicase II
 
Nitrobacter winogradskyi Nb-255

Gene: Nwi_2360: ATP-dependent DNA helicase II
 
Azorhizobium caulinodans ORS 571

Gene: AZC_4475: ATP-dependent DNA helicase II
 
Xanthobacter autotrophicus Py2

Gene: Xaut_1426: ATP-dependent DNA helicase II
ATP-dependent DNA helicase II
 
CRON 18.
radA
 
Sinorhizobium meliloti 1021

Gene: SMc00556: DNA repair protein RadA
 
Rhizobium sp. NGR234

Gene: NGR_c08770: DNA repair protein RadA
 
Rhizobium leguminosarum bv. viciae 3841

Gene: RL1548: DNA repair protein RadA
 
Rhizobium etli CFN 42

Gene: RHE_CH01430: DNA repair protein RadA
*
Agrobacterium tumefaciens str. C58 (Cereon)

Site:
position = -24
score = -0.368708
sequence = AAACAAGAAGAAAAC

Gene: Atu1077: DNA repair protein RadA
 
Mesorhizobium sp. BNC1

Gene: Meso_0985: DNA repair protein RadA
 
Mesorhizobium loti MAFF303099

Gene: mll7835: DNA repair protein RadA
 
Brucella melitensis 16M

Gene: BMEI1486: DNA repair protein RadA
 
Bartonella quintana str. Toulouse

Gene: BQ04450: DNA repair protein RadA
*
Rhodopseudomonas palustris CGA009

Site:
position = -54
score = 1.63721
sequence = GAACAAAATGTGAAC

Gene: RPA3089: DNA repair protein RadA
 
Bradyrhizobium japonicum USDA 110

Gene: bll4062: DNA repair protein RadA
 
Bradyrhizobium sp. BTAi1

Gene: BBta_3789: DNA repair protein RadA
 
Nitrobacter winogradskyi Nb-255

Gene: Nwi_2015: DNA repair protein RadA
 
Azorhizobium caulinodans ORS 571

Gene: AZC_0533: DNA repair protein RadA
 
Xanthobacter autotrophicus Py2

Gene: Xaut_2402: DNA repair protein RadA
DNA repair protein RadA
 
CRON 19.
ssb
*
Sinorhizobium meliloti 1021

Site:
position = -158
score = 0.805834
sequence = GAACAAAAAAAGAAC

Gene: SMc01233: Single-stranded DNA-binding protein
*
Rhizobium sp. NGR234

Site:
position = -157
score = 0.525044
sequence = GAACAAAGAAAGAAC

Gene: NGR_c15580: Single-stranded DNA-binding protein
*
Rhizobium leguminosarum bv. viciae 3841

Site:
position = -138
score = 0.836715
sequence = GAACAAATAAAGAAC

Gene: RL2399: Single-stranded DNA-binding protein
*
Rhizobium etli CFN 42

Site:
position = -160
score = 0.836715
sequence = GAACAAATAAAGAAC

Gene: RHE_CH02108: Single-stranded DNA-binding protein
*
Agrobacterium tumefaciens str. C58 (Cereon)

Site:
position = -172
score = 0.900669
sequence = GAACAAAAAAGGAAC

Gene: Atu1512: Single-stranded DNA-binding protein
*2
Mesorhizobium sp. BNC1

Site:
position = -171
score = 0.900669
sequence = GAACAAAAAAGGAAC

Gene: Meso_1397: Single-stranded DNA-binding protein

Gene: Meso_0204: Single-stranded DNA-binding protein
*
Mesorhizobium loti MAFF303099

Site:
position = -116
score = 0.415335
sequence = GAACGAAAAGGGAAC

Gene: mll0743: Single-stranded DNA-binding protein
*
Brucella melitensis 16M

Site:
position = -202
score = 0.900669
sequence = GAACAAAACAGGAAC

Gene: BMEI0880: Single-stranded DNA-binding protein
 
Bartonella quintana str. Toulouse

Gene: BQ07860: Single-stranded DNA-binding protein
*
Rhodopseudomonas palustris CGA009

Site:
position = -229
score = 1.10616
sequence = GAACAAAAATAGAAC

Gene: RPA2814: Single-stranded DNA-binding protein
*
Bradyrhizobium japonicum USDA 110

Site:
position = -169
score = 1.23188
sequence = GAACAAATCTGGAAC

Gene: bll4698: Single-stranded DNA-binding protein
*2
Bradyrhizobium sp. BTAi1

Gene: BBta_6613: Single-stranded DNA-binding protein

Site:
position = -174
score = 1.201
sequence = GAACAAAACTGGAAC

Gene: BBta_4373: Single-stranded DNA-binding protein
*
Nitrobacter winogradskyi Nb-255

Site:
position = -199
score = 1.13704
sequence = GAACAAATATAGAAC

Gene: Nwi_1566: Single-stranded DNA-binding protein
*
Azorhizobium caulinodans ORS 571

Site:
position = -187
score = 1.39553
sequence = GAACATAAATAGAAC

Site:
position = -265
score = 1.10289
sequence = GAACGTAACAGGAAC

Gene: AZC_2886: Single-stranded DNA-binding protein
*2
Xanthobacter autotrophicus Py2

Site:
position = -151
score = 1.70789
sequence = GAACACATCATGAAC

Site:
position = -252
score = 1.22092
sequence = GAACATATCAGGAAC

Gene: Xaut_4316: Single-stranded DNA-binding protein

Gene: Xaut_3622: Single-stranded DNA-binding protein
Single-stranded DNA-binding protein
 
CRON 20.
imuA
*2
Sinorhizobium meliloti 1021

Site:
position = -36
score = 1.80535
sequence = GAACATAACATGAAC

Gene: SMc03790: Predicted RecA/RadA recombinase

Site:
position = -61
score = 0.676315
sequence = GAACAAATACAGAAC

Gene: SMa0888: Predicted RecA/RadA recombinase
*
Rhizobium sp. NGR234

Site:
position = -36
score = 1.80535
sequence = GAACATAACATGAAC

Gene: NGR_c31880: Predicted RecA/RadA recombinase
*2
Rhizobium leguminosarum bv. viciae 3841

Site:
position = -35
score = 1.19004
sequence = GAACATAACAGGAAC

Gene: RL4699: Predicted RecA/RadA recombinase

Site:
position = -47
score = 0.533363
sequence = GAACAAATAGGGAAC

Gene: RL2115: Predicted RecA/RadA recombinase
*2
Rhizobium etli CFN 42

Site:
position = -37
score = 1.19004
sequence = GAACATAACAGGAAC

Gene: RHE_CH04085: Predicted RecA/RadA recombinase

Site:
position = -59
score = 0.836715
sequence = GAACAAATAAAGAAC

Gene: RHE_PF00150: Predicted RecA/RadA recombinase
*2
Agrobacterium tumefaciens str. C58 (Cereon)

Site:
position = -53
score = 0.805834
sequence = GAACAAAACAAGAAC

Gene: Atu3230: Predicted RecA/RadA recombinase

Site:
position = -76
score = 1.42161
sequence = GAACAAACAATGAAC

Gene: Atu5098: Predicted RecA/RadA recombinase
*2
Mesorhizobium sp. BNC1

Site:
position = -30
score = 1.19004
sequence = GAACATAACAGGAAC

Gene: Meso_3265: Predicted RecA/RadA recombinase

Site:
position = -52
score = 0.438528
sequence = GAACAAATAGAGAAC

Gene: Meso_3807: Predicted RecA/RadA recombinase
*
Mesorhizobium loti MAFF303099

Site:
position = -39
score = 1.19004
sequence = GAACATAACAGGAAC

Gene: mlr4426: Predicted RecA/RadA recombinase
*
Brucella melitensis 16M

Site:
position = -66
score = 1.40717
sequence = GAACATAAAGTGAAC

Gene: BMEI1874: Predicted RecA/RadA recombinase
 
Bartonella quintana str. Toulouse
*
Rhodopseudomonas palustris CGA009

Site:
position = -76
score = 1.83624
sequence = GAACATATCATGAAC

Gene: RPA1801: Predicted RecA/RadA recombinase
*
Bradyrhizobium japonicum USDA 110

Site:
position = -81
score = 1.83624
sequence = GAACATATCATGAAC

Gene: blr3024: Predicted RecA/RadA recombinase
*
Bradyrhizobium sp. BTAi1

Site:
position = -96
score = 1.74909
sequence = GAACGTATCATGAAC

Gene: BBta_2985: Predicted RecA/RadA recombinase
*
Nitrobacter winogradskyi Nb-255

Site:
position = -61
score = 1.43805
sequence = GAACATATAGTGAAC

Gene: Nwi_2257: Predicted RecA/RadA recombinase
*
Azorhizobium caulinodans ORS 571

Site:
position = -20
score = 0.502482
sequence = GAACAAAACGGGAAC

Gene: AZC_3906: Predicted RecA/RadA recombinase
*2
Xanthobacter autotrophicus Py2

Site:
position = -63
score = 0.836715
sequence = GAACAAATAAAGAAC

Gene: Xaut_0810: Predicted RecA/RadA recombinase

Site:
position = -18
score = 0.699004
sequence = GAACAAAAGAGGAAC

Gene: Xaut_3470: Predicted RecA/RadA recombinase
Predicted RecA/RadA recombinase
imuB
 2
Sinorhizobium meliloti 1021

Gene: SMc03789: DNA polymerase-like protein PA0670

Gene: SMa0890: DNA polymerase-like protein PA0670
 
Rhizobium sp. NGR234

Gene: NGR_c31870: DNA polymerase-like protein PA0670
 2
Rhizobium leguminosarum bv. viciae 3841

Gene: RL4698: DNA polymerase-like protein PA0670

Gene: RL2116: DNA polymerase-like protein PA0670
 2
Rhizobium etli CFN 42

Gene: RHE_CH04084: DNA polymerase-like protein PA0670

Gene: RHE_PF00151: DNA polymerase-like protein PA0670
 2
Agrobacterium tumefaciens str. C58 (Cereon)

Gene: Atu3229: DNA polymerase-like protein PA0670

Gene: Atu5099: DNA polymerase-like protein PA0670
 2
Mesorhizobium sp. BNC1

Gene: Meso_3264: DNA polymerase-like protein PA0670

Gene: Meso_3808: DNA polymerase-like protein PA0670
 
Mesorhizobium loti MAFF303099

Gene: mlr4427: DNA polymerase-like protein PA0670
 
Brucella melitensis 16M

Gene: BMEI1875: DNA polymerase-like protein PA0670
 
Bartonella quintana str. Toulouse
 
Rhodopseudomonas palustris CGA009

Gene: RPA1802: DNA polymerase-like protein PA0670
 
Bradyrhizobium japonicum USDA 110

Gene: blr3025: DNA polymerase-like protein PA0670
 
Bradyrhizobium sp. BTAi1

Gene: BBta_2986: DNA polymerase-like protein PA0670
 
Nitrobacter winogradskyi Nb-255

Gene: Nwi_2256: DNA polymerase-like protein PA0670
 
Azorhizobium caulinodans ORS 571

Gene: AZC_3905: DNA polymerase-like protein PA0670
 2
Xanthobacter autotrophicus Py2

Gene: Xaut_0809: DNA polymerase-like protein PA0670

Gene: Xaut_3469: DNA polymerase-like protein PA0670
DNA polymerase-like protein PA0670
dnaE2
 2
Sinorhizobium meliloti 1021

Gene: SMc03788: DNA polymerase III alpha subunit (EC 2.7.7.7)

Gene: SMa0892: DNA polymerase III alpha subunit (EC 2.7.7.7)
 
Rhizobium sp. NGR234

Gene: NGR_c31860: DNA polymerase III alpha subunit (EC 2.7.7.7)
 2
Rhizobium leguminosarum bv. viciae 3841

Gene: RL4697: DNA polymerase III alpha subunit (EC 2.7.7.7)

Gene: RL2117: DNA polymerase III alpha subunit (EC 2.7.7.7)
 2
Rhizobium etli CFN 42

Gene: RHE_CH04083: DNA polymerase III alpha subunit (EC 2.7.7.7)

Gene: RHE_PF00152: DNA polymerase III alpha subunit (EC 2.7.7.7)
 2
Agrobacterium tumefaciens str. C58 (Cereon)

Gene: Atu3228: DNA polymerase III alpha subunit (EC 2.7.7.7)

Gene: Atu5100: DNA polymerase III alpha subunit (EC 2.7.7.7)
 2
Mesorhizobium sp. BNC1

Gene: Meso_3263: DNA polymerase III alpha subunit (EC 2.7.7.7)

Gene: Meso_3809: DNA polymerase III alpha subunit (EC 2.7.7.7)
 
Mesorhizobium loti MAFF303099

Gene: mlr4428: DNA polymerase III alpha subunit (EC 2.7.7.7)
 
Brucella melitensis 16M

Gene: BMEI1876: DNA polymerase III alpha subunit (EC 2.7.7.7)
 
Bartonella quintana str. Toulouse
 
Rhodopseudomonas palustris CGA009

Gene: RPA1803: DNA polymerase III alpha subunit (EC 2.7.7.7)
 
Bradyrhizobium japonicum USDA 110

Gene: blr3026: DNA polymerase III alpha subunit (EC 2.7.7.7)
 
Bradyrhizobium sp. BTAi1

Gene: BBta_2987: DNA polymerase III alpha subunit (EC 2.7.7.7)
 
Nitrobacter winogradskyi Nb-255

Gene: Nwi_2255: DNA polymerase III alpha subunit (EC 2.7.7.7)
 
Azorhizobium caulinodans ORS 571

Gene: AZC_3904: DNA polymerase III alpha subunit (EC 2.7.7.7)
 2
Xanthobacter autotrophicus Py2

Gene: Xaut_0808: DNA polymerase III alpha subunit (EC 2.7.7.7)

Gene: Xaut_3468: DNA polymerase III alpha subunit (EC 2.7.7.7)
DNA polymerase III alpha subunit (EC 2.7.7.7)
 
CRON 21.
lexA
*
Sinorhizobium meliloti 1021

Site:
position = -35
score = 5.45396
sequence = GTTCTTGATTTGTTT

Gene: SMc01183: SOS-response repressor and protease LexA (EC 3.4.21.88)
*
Rhizobium sp. NGR234

Site:
position = 18
score = 5.45396
sequence = GTTCTTGATTTGTTT

Gene: NGR_c15070: SOS-response repressor and protease LexA (EC 3.4.21.88)
*
Rhizobium leguminosarum bv. viciae 3841

Site:
position = -37
score = 5.21349
sequence = GTTCTGGATTTGTTT

Gene: RL2236: SOS-response repressor and protease LexA (EC 3.4.21.88)
*
Rhizobium etli CFN 42

Site:
position = -84
score = 5.21349
sequence = GTTCTGGATTTGTTT

Gene: RHE_CH01928: SOS-response repressor and protease LexA (EC 3.4.21.88)
*
Agrobacterium tumefaciens str. C58 (Cereon)

Site:
position = -52
score = 5.07743
sequence = GTTCTGTATTTGTTT

Gene: Atu1395: SOS-response repressor and protease LexA (EC 3.4.21.88)
*
Mesorhizobium sp. BNC1

Site:
position = -38
score = 4.9327
sequence = GTTCTGGGTTTGTTT

Gene: Meso_1642: SOS-response repressor and protease LexA (EC 3.4.21.88)
*
Mesorhizobium loti MAFF303099

Site:
position = -60
score = 4.9327
sequence = GTTCTGGGTTTGTTT

Gene: mlr0626: SOS-response repressor and protease LexA (EC 3.4.21.88)
*
Brucella melitensis 16M

Site:
position = -45
score = 5.24437
sequence = GTTCTGGTTTTGTTT

Site:
position = -71
score = 1.73113
sequence = GAACAAGACTGGAAC

Gene: BMEI0840: SOS-response repressor and protease LexA (EC 3.4.21.88)
 
Bartonella quintana str. Toulouse

Gene: BQ06160: SOS-response repressor and protease LexA (EC 3.4.21.88)
*
Rhodopseudomonas palustris CGA009

Site:
position = 6
score = 5.24459
sequence = GTTCATGATTTGTTT

Gene: RPA2903: SOS-response repressor and protease LexA (EC 3.4.21.88)
*
Bradyrhizobium japonicum USDA 110

Site:
position = -88
score = 5.24459
sequence = GTTCATGATTTGTTT

Gene: blr4826: SOS-response repressor and protease LexA (EC 3.4.21.88)
*
Bradyrhizobium sp. BTAi1

Site:
position = -124
score = 5.24459
sequence = GTTCATGATTTGTTT

Gene: BBta_4496: SOS-response repressor and protease LexA (EC 3.4.21.88)
*
Nitrobacter winogradskyi Nb-255

Site:
position = -108
score = 5.24459
sequence = GTTCATGATTTGTTT

Gene: Nwi_1841: SOS-response repressor and protease LexA (EC 3.4.21.88)
*
Azorhizobium caulinodans ORS 571

Site:
position = -80
score = 5.27601
sequence = GTTCCTGATTTGTTT

Site:
position = -106
score = 0.0729466
sequence = GAACAAACAAGAAAC

Gene: AZC_2201: SOS-response repressor and protease LexA (EC 3.4.21.88)
*
Xanthobacter autotrophicus Py2

Site:
position = -51
score = 5.24459
sequence = GTTCATGATTTGTTT

Site:
position = -77
score = 1.06169
sequence = GAACACAAAAGGAAC

Gene: Xaut_4371: SOS-response repressor and protease LexA (EC 3.4.21.88)
SOS-response repressor and protease LexA (EC 3.4.21.88)
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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