Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog T-box(Leu) - Staphylococcaceae

Properties
Regulator type: RNA regulatory element
Name: T-box
RFAM: RF00230
Regulation mode:
Biological process: Amino acid metabolism
Effector: Leu-tRNA
Phylum: Firmicutes
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Staphylococcus aureus subsp. aureus N315 1 1
Staphylococcus capitis SK14 1 1
Staphylococcus epidermidis ATCC 12228 1 1
Staphylococcus carnosus subsp. carnosus TM300 2 1
Staphylococcus haemolyticus JCSC1435 1 1
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 1 1
Macrococcus caseolyticus JCSC5402 1 1
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
leuS
*
Staphylococcus aureus subsp. aureus N315

Site:
position = -222
score = 63.16
sequence = TTTAATTTCGTTTGG...

Gene: SA1579: Leucyl-tRNA synthetase (EC 6.1.1.4)
*
Staphylococcus capitis SK14

Site:
position = -237
score = 66.09
sequence = ATTAAAAATGAATAG...

Gene: STACA0001_0652: Leucyl-tRNA synthetase (EC 6.1.1.4)
*
Staphylococcus epidermidis ATCC 12228

Site:
position = -205
score = 75.54
sequence = TAAACACGTATAGTA...

Gene: SE1431: Leucyl-tRNA synthetase (EC 6.1.1.4)
*2
Staphylococcus carnosus subsp. carnosus TM300

Site:
position = -242
score = 83.28
sequence = AATAGATGTATATGG...

Gene: Sca_1365: Leucyl-tRNA synthetase (EC 6.1.1.4)

Gene: Sca_1364: Leucyl-tRNA synthetase (EC 6.1.1.4)
*
Staphylococcus haemolyticus JCSC1435

Site:
position = -231
score = 93.12
sequence = ATATTAAAATGTATT...

Gene: SH1163: Leucyl-tRNA synthetase (EC 6.1.1.4)
*
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305

Site:
position = -240
score = 89.75
sequence = TATTAGTAATGTATA...

Gene: SSP1006: Leucyl-tRNA synthetase (EC 6.1.1.4)
*
Macrococcus caseolyticus JCSC5402

Site:
position = -219
score = 55.32
sequence = TTATGATAGATTTAA...

Gene: MCCL_1435: Leucyl-tRNA synthetase (EC 6.1.1.4)
Leucyl-tRNA synthetase (EC 6.1.1.4)
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD