Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog T-box(Gly) - Bacillales

Properties
Regulator type: RNA regulatory element
Name: T-box
RFAM: RF00230
Regulation mode:
Biological process: Amino acid metabolism
Effector: Gly-tRNA
Phylum: Firmicutes
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Bacillus subtilis subsp. subtilis str. 168 2 1
Bacillus amyloliquefaciens FZB42 2 1
Bacillus pumilus SAFR-032 2 1
Bacillus licheniformis DSM 13 2 1
Anoxybacillus flavithermus WK1 1 1
Geobacillus kaustophilus HTA426 1 1
Bacillus cereus ATCC 14579
Bacillus halodurans C-125 2 1
Bacillus clausii KSM-K16
Oceanobacillus iheyensis HTE831 2 1
Paenibacillus sp. JDR-2 2 1
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
glyS
 
Bacillus subtilis subsp. subtilis str. 168
 
Bacillus amyloliquefaciens FZB42
 
Bacillus pumilus SAFR-032
 
Bacillus licheniformis DSM 13
*
Anoxybacillus flavithermus WK1

Site:
position = -236
score = 91.78
sequence = AGGTGCAACGATGAA...

Gene: Aflv_2771: Glycyl-tRNA synthetase (EC 6.1.1.14)
*
Geobacillus kaustophilus HTA426

Site:
position = -244
score = 76.88
sequence = ATGGATCGCGATGAC...

Gene: GK3430: Glycyl-tRNA synthetase (EC 6.1.1.14)
 
Bacillus cereus ATCC 14579
 
Bacillus halodurans C-125
 
Bacillus clausii KSM-K16
 
Oceanobacillus iheyensis HTE831
 
Paenibacillus sp. JDR-2
Glycyl-tRNA synthetase (EC 6.1.1.14)
 
CRON 2.
glyQ
*
Bacillus subtilis subsp. subtilis str. 168

Site:
position = -258
score = 96.78
sequence = ATATGTTGCAGTGAG...

Gene: BSU25270: Glycyl-tRNA synthetase alpha chain (EC 6.1.1.14)
*
Bacillus amyloliquefaciens FZB42

Site:
position = -263
score = 87.01
sequence = ATATGTTGCAGTGAC...

Gene: RBAM_023570: Glycyl-tRNA synthetase alpha chain (EC 6.1.1.14)
*
Bacillus pumilus SAFR-032

Site:
position = -291
score = 93.34
sequence = ATATGTTGCATTGAC...

Gene: BPUM_2259: Glycyl-tRNA synthetase alpha chain (EC 6.1.1.14)
*
Bacillus licheniformis DSM 13

Site:
position = -280
score = 88.59
sequence = TGATGTTGCGTTGAC...

Gene: BLi02718: Glycyl-tRNA synthetase alpha chain (EC 6.1.1.14)
 
Anoxybacillus flavithermus WK1
 
Geobacillus kaustophilus HTA426
 
Bacillus cereus ATCC 14579
*
Bacillus halodurans C-125

Site:
position = -326
score = 100.59
sequence = TCAATGCTATGACGG...

Gene: BH1370: Glycyl-tRNA synthetase alpha chain (EC 6.1.1.14)
 
Bacillus clausii KSM-K16

Gene: ABC1684: Glycyl-tRNA synthetase alpha chain (EC 6.1.1.14)
*
Oceanobacillus iheyensis HTE831

Site:
position = -272
score = 96.42
sequence = TTCTATTGCGATGAA...

Gene: OB1949: Glycyl-tRNA synthetase alpha chain (EC 6.1.1.14)
*
Paenibacillus sp. JDR-2

Site:
position = -281
score = 60.87
sequence = TATGGACAGTGATGG...

Gene: Pjdr2_2239: Glycyl-tRNA synthetase alpha chain (EC 6.1.1.14)
Glycyl-tRNA synthetase alpha chain (EC 6.1.1.14)
glyS
 
Bacillus subtilis subsp. subtilis str. 168

Gene: BSU25260: Glycyl-tRNA synthetase beta chain (EC 6.1.1.14)
 
Bacillus amyloliquefaciens FZB42

Gene: RBAM_023560: Glycyl-tRNA synthetase beta chain (EC 6.1.1.14)
 
Bacillus pumilus SAFR-032

Gene: BPUM_2258: Glycyl-tRNA synthetase beta chain (EC 6.1.1.14)
 
Bacillus licheniformis DSM 13

Gene: BLi02717: Glycyl-tRNA synthetase beta chain (EC 6.1.1.14)
 
Anoxybacillus flavithermus WK1
 
Geobacillus kaustophilus HTA426
 
Bacillus cereus ATCC 14579
 
Bacillus halodurans C-125

Gene: BH1371: Glycyl-tRNA synthetase beta chain (EC 6.1.1.14)
 
Bacillus clausii KSM-K16

Gene: ABC1685: Glycyl-tRNA synthetase beta chain (EC 6.1.1.14)
 
Oceanobacillus iheyensis HTE831

Gene: OB1948: Glycyl-tRNA synthetase beta chain (EC 6.1.1.14)
 
Paenibacillus sp. JDR-2

Gene: Pjdr2_2240: Glycyl-tRNA synthetase beta chain (EC 6.1.1.14)
Glycyl-tRNA synthetase beta chain (EC 6.1.1.14)
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD