Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog Leu_leader - Shewanellaceae

Properties
Regulator type: RNA regulatory element
Name: Leu_leader
RFAM: RF00512
Regulation mode:
Biological process: Branched-chain amino acid biosynthesis
Effector:
Phylum: Proteobacteria
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Shewanella oneidensis MR-1 4 1
Shewanella putrefaciens CN-32 4 1
Shewanella sp W3-18-1 4 1
Shewanella sp ANA-3 4 1
Shewanella sp MR-4 4 1
Shewanella sp MR-7 4 1
Shewanella baltica OS155 4 1
Shewanella denitrificans OS217 4 1
Shewanella frigidimarina NCIMB 400 4 1
Shewanella amazonensis SB2B 4 1
Shewanella loihica PV-4 4 1
Shewanella pealeana ATCC 700345 4 1
Shewanella halifaxensis HAW-EB4 4 1
Shewanella piezotolerans WP3 4 1
Shewanella sediminis HAW-EB3 4 1
Shewanella woodyi ATCC 51908 4 1
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
leuA
*
Shewanella oneidensis MR-1

Site:
position = -111
score = 24.15
sequence = TCGATAGATAGGCAA...

Gene: SO_4236: 2-isopropylmalate synthase (EC 2.3.3.13)
*
Shewanella putrefaciens CN-32

Site:
position = -105
score = 22.08
sequence = AAGAGGCAAAGCATT...

Gene: Sputcn32_0471: 2-isopropylmalate synthase (EC 2.3.3.13)
*
Shewanella sp W3-18-1

Site:
position = -105
score = 22.08
sequence = AAGAGGCAAAGCATT...

Gene: Sputw3181_0374: 2-isopropylmalate synthase (EC 2.3.3.13)
*
Shewanella sp ANA-3

Site:
position = -111
score = 23.81
sequence = TCGATAGATAGGCAA...

Gene: Shewana3_3761: 2-isopropylmalate synthase (EC 2.3.3.13)
*
Shewanella sp MR-4

Site:
position = -111
score = 21.9
sequence = TCGATAGATAGGCAA...

Gene: Shewmr4_3588: 2-isopropylmalate synthase (EC 2.3.3.13)
*
Shewanella sp MR-7

Site:
position = -109
score = 21.9
sequence = GATAGATAGGCAAAG...

Gene: Shewmr7_0368: 2-isopropylmalate synthase (EC 2.3.3.13)
*
Shewanella baltica OS155

Site:
position = -105
score = 21.79
sequence = AATAGGCAAAGCATT...

Gene: Sbal_0386: 2-isopropylmalate synthase (EC 2.3.3.13)
*
Shewanella denitrificans OS217

Site:
position = -173
score = 17.57
sequence = GAAACACACTTACTT...

Gene: Sden_0334: 2-isopropylmalate synthase (EC 2.3.3.13)
*
Shewanella frigidimarina NCIMB 400

Site:
position = -212
score = 29.92
sequence = ACATAATGAACACAC...

Gene: Sfri_3820: 2-isopropylmalate synthase (EC 2.3.3.13)
*
Shewanella amazonensis SB2B

Site:
position = -110
score = 19.96
sequence = GCTAGCCAAGCAAAG...

Gene: Sama_0335: 2-isopropylmalate synthase (EC 2.3.3.13)
*
Shewanella loihica PV-4

Site:
position = -134
score = 20.6
sequence = GGAGAATGTAGTGTT...

Gene: Shew_3472: 2-isopropylmalate synthase (EC 2.3.3.13)
*
Shewanella pealeana ATCC 700345

Site:
position = -136
score = 17.71
sequence = GGAGGACTTAGTGCT...

Gene: Spea_3828: 2-isopropylmalate synthase (EC 2.3.3.13)
*
Shewanella halifaxensis HAW-EB4

Site:
position = -212
score = 19.28
sequence = GTGATGAAATATAAC...

Gene: Shal_0438: 2-isopropylmalate synthase (EC 2.3.3.13)
*
Shewanella piezotolerans WP3

Site:
position = -192
score = 21.21
sequence = ACCATTTATGAAGCG...

Gene: swp_2213: 2-isopropylmalate synthase (EC 2.3.3.13)
*
Shewanella sediminis HAW-EB3

Site:
position = -194
score = 20.76
sequence = ATGAAAATTAAAAGT...

Gene: Ssed_0393: 2-isopropylmalate synthase (EC 2.3.3.13)
*
Shewanella woodyi ATCC 51908

Site:
position = -199
score = 24.84
sequence = AGATGAATATTAGCC...

Gene: Swoo_4550: 2-isopropylmalate synthase (EC 2.3.3.13)
2-isopropylmalate synthase (EC 2.3.3.13)
leuB
 
Shewanella oneidensis MR-1

Gene: SO_4235: 3-isopropylmalate dehydrogenase (EC 1.1.1.85)
 
Shewanella putrefaciens CN-32

Gene: Sputcn32_0472: 3-isopropylmalate dehydrogenase (EC 1.1.1.85)
 
Shewanella sp W3-18-1

Gene: Sputw3181_0375: 3-isopropylmalate dehydrogenase (EC 1.1.1.85)
 
Shewanella sp ANA-3

Gene: Shewana3_3760: 3-isopropylmalate dehydrogenase (EC 1.1.1.85)
 
Shewanella sp MR-4

Gene: Shewmr4_3587: 3-isopropylmalate dehydrogenase (EC 1.1.1.85)
 
Shewanella sp MR-7

Gene: Shewmr7_0369: 3-isopropylmalate dehydrogenase (EC 1.1.1.85)
 
Shewanella baltica OS155

Gene: Sbal_0387: 3-isopropylmalate dehydrogenase (EC 1.1.1.85)
 
Shewanella denitrificans OS217

Gene: Sden_0335: 3-isopropylmalate dehydrogenase (EC 1.1.1.85)
 
Shewanella frigidimarina NCIMB 400

Gene: Sfri_3819: 3-isopropylmalate dehydrogenase (EC 1.1.1.85)
 
Shewanella amazonensis SB2B

Gene: Sama_0336: 3-isopropylmalate dehydrogenase (EC 1.1.1.85)
 
Shewanella loihica PV-4

Gene: Shew_3471: 3-isopropylmalate dehydrogenase (EC 1.1.1.85)
 
Shewanella pealeana ATCC 700345

Gene: Spea_3827: 3-isopropylmalate dehydrogenase (EC 1.1.1.85)
 
Shewanella halifaxensis HAW-EB4

Gene: Shal_0439: 3-isopropylmalate dehydrogenase (EC 1.1.1.85)
 
Shewanella piezotolerans WP3

Gene: swp_2214: 3-isopropylmalate dehydrogenase (EC 1.1.1.85)
 
Shewanella sediminis HAW-EB3

Gene: Ssed_0394: 3-isopropylmalate dehydrogenase (EC 1.1.1.85)
 
Shewanella woodyi ATCC 51908

Gene: Swoo_4549: 3-isopropylmalate dehydrogenase (EC 1.1.1.85)
3-isopropylmalate dehydrogenase (EC 1.1.1.85)
leuC
 
Shewanella oneidensis MR-1

Gene: SO_4234: 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)
 
Shewanella putrefaciens CN-32

Gene: Sputcn32_0473: 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)
 
Shewanella sp W3-18-1

Gene: Sputw3181_0376: 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)
 
Shewanella sp ANA-3

Gene: Shewana3_3759: 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)
 
Shewanella sp MR-4

Gene: Shewmr4_3586: 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)
 
Shewanella sp MR-7

Gene: Shewmr7_0370: 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)
 
Shewanella baltica OS155

Gene: Sbal_0388: 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)
 
Shewanella denitrificans OS217

Gene: Sden_0336: 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)
 
Shewanella frigidimarina NCIMB 400

Gene: Sfri_3818: 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)
 
Shewanella amazonensis SB2B

Gene: Sama_0337: 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)
 
Shewanella loihica PV-4

Gene: Shew_3470: 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)
 
Shewanella pealeana ATCC 700345

Gene: Spea_3826: 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)
 
Shewanella halifaxensis HAW-EB4

Gene: Shal_0440: 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)
 
Shewanella piezotolerans WP3

Gene: swp_2215: 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)
 
Shewanella sediminis HAW-EB3

Gene: Ssed_0395: 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)
 
Shewanella woodyi ATCC 51908

Gene: Swoo_4548: 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)
3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)
leuD
 
Shewanella oneidensis MR-1

Gene: SO_4233: 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)
 
Shewanella putrefaciens CN-32

Gene: Sputcn32_0474: 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)
 
Shewanella sp W3-18-1

Gene: Sputw3181_0377: 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)
 
Shewanella sp ANA-3

Gene: Shewana3_3758: 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)
 
Shewanella sp MR-4

Gene: Shewmr4_3585: 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)
 
Shewanella sp MR-7

Gene: Shewmr7_0371: 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)
 
Shewanella baltica OS155

Gene: Sbal_0389: 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)
 
Shewanella denitrificans OS217

Gene: Sden_0337: 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)
 
Shewanella frigidimarina NCIMB 400

Gene: Sfri_3817: 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)
 
Shewanella amazonensis SB2B

Gene: Sama_0338: 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)
 
Shewanella loihica PV-4

Gene: Shew_3469: 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)
 
Shewanella pealeana ATCC 700345

Gene: Spea_3825: 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)
 
Shewanella halifaxensis HAW-EB4

Gene: Shal_0441: 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)
 
Shewanella piezotolerans WP3

Gene: swp_2216: 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)
 
Shewanella sediminis HAW-EB3

Gene: Ssed_0396: 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)
 
Shewanella woodyi ATCC 51908

Gene: Swoo_4547: 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)
3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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