Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog L21_leader - Cyanobacteria

Properties
Regulator type: RNA regulatory element
Name: L21_leader
RFAM: RF00559
Regulation mode:
Biological process: Ribosome biogenesis
Effector:
Phylum: Cyanobacteria
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Synechococcus sp. PCC 7002
Synechocystis sp. PCC 6803
Cyanothece sp. ATCC 51142
Cyanothece sp. PCC 8801
Cyanothece sp. PCC 7425
Microcystis aeruginosa NIES-843
Nostoc sp. PCC 7120
Trichodesmium erythraeum IMS101
Synechococcus elongatus PCC 7942
Prochlorococcus marinus str. MIT 9313
Synechococcus sp. JA-3-3Ab 2 1
Synechococcus sp. WH 8102
Gloeobacter violaceus PCC 7421
Thermosynechococcus elongatus BP-1
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
rplU
 
Synechococcus sp. PCC 7002

Gene: SYNPCC7002_A0490: ribosomal protein L21
 
Synechocystis sp. PCC 6803

Gene: slr1678: ribosomal protein L21
 
Cyanothece sp. ATCC 51142

Gene: cce_1391: ribosomal protein L21
 
Cyanothece sp. PCC 8801

Gene: PCC8801_3346: ribosomal protein L21
 
Cyanothece sp. PCC 7425

Gene: Cyan7425_0646: ribosomal protein L21
 
Microcystis aeruginosa NIES-843

Gene: MAE_08010: ribosomal protein L21
 
Nostoc sp. PCC 7120

Gene: all0147: ribosomal protein L21
 
Trichodesmium erythraeum IMS101

Gene: Tery_3243: ribosomal protein L21
 
Synechococcus elongatus PCC 7942

Gene: Synpcc7942_1219: ribosomal protein L21
 
Prochlorococcus marinus str. MIT 9313

Gene: PMT1420: ribosomal protein L21
*
Synechococcus sp. JA-3-3Ab

Site:
position = -55
score = 18.87
sequence = ATGCTCGGATCAGGT...

Gene: CYA_2052: ribosomal protein L21
 
Synechococcus sp. WH 8102

Gene: SYNW0547: ribosomal protein L21
 
Gloeobacter violaceus PCC 7421

Gene: gvip095: ribosomal protein L21
 
Thermosynechococcus elongatus BP-1

Gene: null: ribosomal protein L21
ribosomal protein L21
rpmA
 
Synechococcus sp. PCC 7002

Gene: SYNPCC7002_A0489: ribosomal protein L27
 
Synechocystis sp. PCC 6803

Gene: ssr2799: ribosomal protein L27
 
Cyanothece sp. ATCC 51142

Gene: cce_1392: ribosomal protein L27
 
Cyanothece sp. PCC 8801

Gene: PCC8801_3345: ribosomal protein L27
 
Cyanothece sp. PCC 7425

Gene: Cyan7425_0647: ribosomal protein L27
 
Microcystis aeruginosa NIES-843

Gene: MAE_08020: ribosomal protein L27
 
Nostoc sp. PCC 7120

Gene: asl0146: ribosomal protein L27
 
Trichodesmium erythraeum IMS101

Gene: Tery_3242: ribosomal protein L27
 
Synechococcus elongatus PCC 7942

Gene: Synpcc7942_1220: ribosomal protein L27
 
Prochlorococcus marinus str. MIT 9313

Gene: PMT1421: ribosomal protein L27
 
Synechococcus sp. JA-3-3Ab

Gene: CYA_2051: ribosomal protein L27
 
Synechococcus sp. WH 8102

Gene: SYNW0546: ribosomal protein L27
 
Gloeobacter violaceus PCC 7421

Gene: gvip094: ribosomal protein L27
 
Thermosynechococcus elongatus BP-1

Gene: null: ribosomal protein L27
ribosomal protein L27
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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