Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog L10_leader - Corynebacteriaceae

Properties
Regulator type: RNA regulatory element
Name: L10_leader
RFAM: RF00557
Regulation mode:
Biological process: Ribosome biogenesis
Effector:
Phylum: Actinobacteria
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Corynebacterium glutamicum ATCC 13032 2 1
Corynebacterium efficiens YS-314 2 1
Corynebacterium diphtheriae NCTC 13129 2 1
Corynebacterium aurimucosum ATCC 700975
Corynebacterium jeikeium K411
Corynebacterium urealyticum DSM 7109
Corynebacterium amycolatum SK46
Corynebacterium kroppenstedtii DSM 44385
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
rplJ
*
Corynebacterium glutamicum ATCC 13032

Site:
position = -224
score = 25.14
sequence = ATCGAGCTCAAGGTT...

Gene: cg0572: 50S ribosomal protein L10
*
Corynebacterium efficiens YS-314

Site:
position = -239
score = 18.29
sequence = GTTGTATTCAAGGTT...

Gene: CE0493: 50S ribosomal protein L10
*
Corynebacterium diphtheriae NCTC 13129

Site:
position = -219
score = 35.66
sequence = AATGATTTCAAGTTT...

Gene: DIP0436: 50S ribosomal protein L10
 
Corynebacterium aurimucosum ATCC 700975

Gene: cauri_0364: 50S ribosomal protein L10
 
Corynebacterium jeikeium K411

Gene: jk1849: 50S ribosomal protein L10
 
Corynebacterium urealyticum DSM 7109

Gene: cur_0297: 50S ribosomal protein L10
 
Corynebacterium amycolatum SK46

Gene: CORAM0001_0156: 50S ribosomal protein L10
 
Corynebacterium kroppenstedtii DSM 44385

Gene: ckrop_1860: 50S ribosomal protein L10
50S ribosomal protein L10
rplL
 2
Corynebacterium glutamicum ATCC 13032

Gene: cg0573: 50S ribosomal protein L7/L12

Gene: cg0505: 50S ribosomal protein L7/L12
 2
Corynebacterium efficiens YS-314

Gene: CE0445: 50S ribosomal protein L7/L12

Gene: CE0494: 50S ribosomal protein L7/L12
 
Corynebacterium diphtheriae NCTC 13129

Gene: DIP0437: 50S ribosomal protein L7/L12
 
Corynebacterium aurimucosum ATCC 700975

Gene: cauri_0365: 50S ribosomal protein L7/L12
 
Corynebacterium jeikeium K411

Gene: jk1848: 50S ribosomal protein L7/L12
 
Corynebacterium urealyticum DSM 7109

Gene: cur_0298: 50S ribosomal protein L7/L12
 
Corynebacterium amycolatum SK46

Gene: CORAM0001_0157: 50S ribosomal protein L7/L12
 
Corynebacterium kroppenstedtii DSM 44385

Gene: ckrop_1859: 50S ribosomal protein L7/L12
50S ribosomal protein L7/L12
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD