Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog L10_leader - Bacillales

Properties
Regulator type: RNA regulatory element
Name: L10_leader
RFAM: RF00557
Regulation mode:
Biological process: Ribosome biogenesis
Effector:
Phylum: Firmicutes
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Bacillus subtilis subsp. subtilis str. 168 2 1
Bacillus amyloliquefaciens FZB42 2 1
Bacillus pumilus SAFR-032 2 1
Bacillus licheniformis DSM 13 2 1
Anoxybacillus flavithermus WK1 2 1
Geobacillus kaustophilus HTA426 2 1
Bacillus cereus ATCC 14579 2 1
Bacillus halodurans C-125 2 1
Bacillus clausii KSM-K16 2 1
Oceanobacillus iheyensis HTE831 2 1
Paenibacillus sp. JDR-2 2 1
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
rplJ
*
Bacillus subtilis subsp. subtilis str. 168

Site:
position = -205
score = 89.47
sequence = ATAGAATATCATTTA...

Gene: BSU01040: 50S ribosomal protein L10
*
Bacillus amyloliquefaciens FZB42

Site:
position = -205
score = 94.14
sequence = ATAATATGTCATTTA...

Gene: RBAM_001290: 50S ribosomal protein L10
*
Bacillus pumilus SAFR-032

Site:
position = -209
score = 76.09
sequence = GAATATGTCCATTTA...

Gene: BPUM_0089: 50S ribosomal protein L10
*
Bacillus licheniformis DSM 13

Site:
position = -210
score = 83.99
sequence = AAATATGTCCATTTA...

Gene: BLi00122: 50S ribosomal protein L10
*
Anoxybacillus flavithermus WK1

Site:
position = -134
score = 82.97
sequence = AGCGAATATCATTTG...

Gene: Aflv_0094: 50S ribosomal protein L10
*
Geobacillus kaustophilus HTA426

Site:
position = -210
score = 80.95
sequence = AATGAATATCATTTG...

Gene: GK0095: 50S ribosomal protein L10
*
Bacillus cereus ATCC 14579

Site:
position = -183
score = 78.59
sequence = TGAATTTAATTAGTG...

Gene: BC0119: 50S ribosomal protein L10
*
Bacillus halodurans C-125

Site:
position = -178
score = 83.55
sequence = ACAGGCGTTGAAACA...

Gene: BH0121: 50S ribosomal protein L10
*
Bacillus clausii KSM-K16

Site:
position = -175
score = 85.99
sequence = GAAATAGAATAGTCA...

Gene: ABC0139: 50S ribosomal protein L10
*
Oceanobacillus iheyensis HTE831

Site:
position = -219
score = 86.09
sequence = AAAAAGAATACGTTA...

Gene: OB0109: 50S ribosomal protein L10
*
Paenibacillus sp. JDR-2

Site:
position = -214
score = 68.36
sequence = TAACATTCGAATACG...

Gene: Pjdr2_5694: 50S ribosomal protein L10
50S ribosomal protein L10
rplL
 
Bacillus subtilis subsp. subtilis str. 168

Gene: BSU01050: LSU ribosomal protein L7/L12 (P1/P2)
 
Bacillus amyloliquefaciens FZB42

Gene: RBAM_001300: LSU ribosomal protein L7/L12 (P1/P2)
 
Bacillus pumilus SAFR-032

Gene: BPUM_0090: LSU ribosomal protein L7/L12 (P1/P2)
 
Bacillus licheniformis DSM 13

Gene: BLi00123: LSU ribosomal protein L7/L12 (P1/P2)
 
Anoxybacillus flavithermus WK1

Gene: Aflv_0095: LSU ribosomal protein L7/L12 (P1/P2)
 
Geobacillus kaustophilus HTA426

Gene: GK0096: LSU ribosomal protein L7/L12 (P1/P2)
 
Bacillus cereus ATCC 14579

Gene: BC0120: LSU ribosomal protein L7/L12 (P1/P2)
 
Bacillus halodurans C-125

Gene: BH0122: LSU ribosomal protein L7/L12 (P1/P2)
 
Bacillus clausii KSM-K16

Gene: ABC0140: LSU ribosomal protein L7/L12 (P1/P2)
 
Oceanobacillus iheyensis HTE831

Gene: OB0110: LSU ribosomal protein L7/L12 (P1/P2)
 
Paenibacillus sp. JDR-2

Gene: Pjdr2_5693: LSU ribosomal protein L7/L12 (P1/P2)
LSU ribosomal protein L7/L12 (P1/P2)
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD