Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog L10_leader - Staphylococcaceae

Properties
Regulator type: RNA regulatory element
Name: L10_leader
RFAM: RF00557
Regulation mode:
Biological process: Ribosome biogenesis
Effector:
Phylum: Firmicutes
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Staphylococcus aureus subsp. aureus N315 2 1
Staphylococcus capitis SK14 2 1
Staphylococcus epidermidis ATCC 12228 2 1
Staphylococcus carnosus subsp. carnosus TM300 2 1
Staphylococcus haemolyticus JCSC1435 2 1
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 2 1
Macrococcus caseolyticus JCSC5402 2 1
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
rplJ
*
Staphylococcus aureus subsp. aureus N315

Site:
position = -183
score = 72.05
sequence = TTATTGTGATTATTT...

Gene: SA0497: LSU ribosomal protein L10p (P0)
*
Staphylococcus capitis SK14

Site:
position = -187
score = 79.7
sequence = ATTAATTGTGATTAT...

Gene: STACA0001_0494: LSU ribosomal protein L10p (P0)
*
Staphylococcus epidermidis ATCC 12228

Site:
position = -186
score = 78.36
sequence = TACTTGTGATTATTT...

Gene: SE0303: LSU ribosomal protein L10p (P0)
*
Staphylococcus carnosus subsp. carnosus TM300

Site:
position = -195
score = 69.66
sequence = TTAATGTGATTATTT...

Gene: Sca_0195: LSU ribosomal protein L10p (P0)
*
Staphylococcus haemolyticus JCSC1435

Site:
position = -191
score = 71.31
sequence = ATTTATTGTGATTAT...

Gene: SH2468: LSU ribosomal protein L10p (P0)
*
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305

Site:
position = -227
score = 73.64
sequence = TGGTTAATGTATTAT...

Gene: SSP2216: LSU ribosomal protein L10p (P0)
*
Macrococcus caseolyticus JCSC5402

Site:
position = -164
score = 74.31
sequence = ATTTGTATTTTATAA...

Gene: MCCL_1869: LSU ribosomal protein L10p (P0)
LSU ribosomal protein L10p (P0)
rplL
 
Staphylococcus aureus subsp. aureus N315

Gene: SA0498: LSU ribosomal protein L7/L12 (P1/P2)
 
Staphylococcus capitis SK14

Gene: STACA0001_0493: LSU ribosomal protein L7/L12 (P1/P2)
 
Staphylococcus epidermidis ATCC 12228

Gene: SE0304: LSU ribosomal protein L7/L12 (P1/P2)
 
Staphylococcus carnosus subsp. carnosus TM300

Gene: Sca_0196: LSU ribosomal protein L7/L12 (P1/P2)
 
Staphylococcus haemolyticus JCSC1435

Gene: SH2467: LSU ribosomal protein L7/L12 (P1/P2)
 
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305

Gene: SSP2215: LSU ribosomal protein L7/L12 (P1/P2)
 
Macrococcus caseolyticus JCSC5402

Gene: MCCL_1868: LSU ribosomal protein L7/L12 (P1/P2)
LSU ribosomal protein L7/L12 (P1/P2)
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulatory Sites [ FASTA format ] DOWNLOAD