Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog His_leader - Thermotogales

Properties
Regulator type: RNA regulatory element
Name: His_leader
RFAM: RF00514
Regulation mode:
Biological process: Histidine biosynthesis
Effector:
Phylum: Thermotogae
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Thermotoga maritima MSB8
Thermotoga sp. RQ2
Thermotoga neapolitana DSM 4359
Thermotoga petrophila RKU-1
Thermotoga naphthophila RKU-10
Thermotoga lettingae TMO 3 1
Thermosipho africanus TCF52B
Thermosipho melanesiensis BI429
Fervidobacterium nodosum Rt17-B1
Petrotoga mobilis SJ95
Thermotogales bacterium TBF 19.5.1
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
hisJ
 
Thermotoga maritima MSB8
 
Thermotoga sp. RQ2
 
Thermotoga neapolitana DSM 4359
 
Thermotoga petrophila RKU-1
 
Thermotoga naphthophila RKU-10
*
Thermotoga lettingae TMO

Site:
position = -130
score = 28.85
sequence = TTACAACAGAGGCAG...

Gene: Tlet_0482: Histidine ABC transporter, periplasmic binding protein
 
Thermosipho africanus TCF52B
 
Thermosipho melanesiensis BI429
 
Fervidobacterium nodosum Rt17-B1
 
Petrotoga mobilis SJ95
 
Thermotogales bacterium TBF 19.5.1

Gene: Kole_1671: Histidine ABC transporter, periplasmic binding protein
Histidine ABC transporter, periplasmic binding protein
hisM
 
Thermotoga maritima MSB8
 
Thermotoga sp. RQ2
 
Thermotoga neapolitana DSM 4359
 
Thermotoga petrophila RKU-1
 
Thermotoga naphthophila RKU-10
 
Thermotoga lettingae TMO

Gene: Tlet_0483: Histidine ABC transporter, permease protein
 
Thermosipho africanus TCF52B
 
Thermosipho melanesiensis BI429
 
Fervidobacterium nodosum Rt17-B1
 
Petrotoga mobilis SJ95
 
Thermotogales bacterium TBF 19.5.1

Gene: Kole_1672: Histidine ABC transporter, permease protein
Histidine ABC transporter, permease protein
hisJ
 
Thermotoga maritima MSB8
 
Thermotoga sp. RQ2
 
Thermotoga neapolitana DSM 4359
 
Thermotoga petrophila RKU-1
 
Thermotoga naphthophila RKU-10
 
Thermotoga lettingae TMO

Gene: Tlet_0484: Histidine ABC transporter, ATP-binding protein (TC 3.A.1.3.2)
 
Thermosipho africanus TCF52B
 
Thermosipho melanesiensis BI429
 
Fervidobacterium nodosum Rt17-B1
 
Petrotoga mobilis SJ95
 
Thermotogales bacterium TBF 19.5.1

Gene: Kole_1673: Histidine ABC transporter, ATP-binding protein (TC 3.A.1.3.2)
Histidine ABC transporter, ATP-binding protein (TC 3.A.1.3.2)
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD