Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog ykoK - Corynebacteriaceae

Properties
Regulator type: RNA regulatory element
Name: ykoK
RFAM: RF00380
Regulation mode:
Biological process: Magnesium homeostasis
Effector: Magnesium ion, (Mg2+)
Phylum: Actinobacteria
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Corynebacterium glutamicum ATCC 13032
Corynebacterium efficiens YS-314
Corynebacterium diphtheriae NCTC 13129
Corynebacterium aurimucosum ATCC 700975
Corynebacterium jeikeium K411
Corynebacterium urealyticum DSM 7109
Corynebacterium amycolatum SK46 1 1
Corynebacterium kroppenstedtii DSM 44385
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
mgtE
 
Corynebacterium glutamicum ATCC 13032
 
Corynebacterium efficiens YS-314
 
Corynebacterium diphtheriae NCTC 13129
 
Corynebacterium aurimucosum ATCC 700975
 
Corynebacterium jeikeium K411
 
Corynebacterium urealyticum DSM 7109
*
Corynebacterium amycolatum SK46

Site:
position = -218
score = 33.44
sequence = AACAACCTCGTTAGG...

Gene: CORAM0001_0484: Magnesium transporter
 
Corynebacterium kroppenstedtii DSM 44385
Magnesium transporter
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD