Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog ykoK - Enterobacteriales

Properties
Regulator type: RNA regulatory element
Name: ykoK
RFAM: RF00380
Regulation mode:
Biological process: Magnesium homeostasis
Effector: Magnesium ion, (Mg2+)
Phylum: Proteobacteria
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Escherichia coli str. K-12 substr. MG1655
Salmonella typhimurium LT2
Citrobacter koseri ATCC BAA-895 1 1
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 1 1
Enterobacter sp. 638
Erwinia amylovora ATCC 49946
Yersinia pestis KIM
Serratia proteamaculans 568 1 1
Erwinia carotovora subsp. atroseptica SCRI1043
Edwardsiella tarda EIB202
Proteus mirabilis HI4320 1 1
Photorhabdus luminescens subsp. laumondii TTO1 1 1
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
mgtE
 
Escherichia coli str. K-12 substr. MG1655
 
Salmonella typhimurium LT2
*
Citrobacter koseri ATCC BAA-895

Site:
position = -239
score = 100.0
sequence = ATCGATCTCGTTATG...

Gene: CKO_04939: Magnesium transporter
*
Klebsiella pneumoniae subsp. pneumoniae MGH 78578

Site:
position = -238
score = 97.31
sequence = AACGATCTCGTTATG...

Gene: KPN_03856: Magnesium transporter
 
Enterobacter sp. 638
 
Erwinia amylovora ATCC 49946
 
Yersinia pestis KIM
*
Serratia proteamaculans 568

Site:
position = -250
score = 137.4
sequence = TGCAGTATCTCGTTT...

Gene: Spro_2531: Magnesium transporter
 
Erwinia carotovora subsp. atroseptica SCRI1043
 
Edwardsiella tarda EIB202
*
Proteus mirabilis HI4320

Site:
position = -249
score = 131.54
sequence = TGCAGTATCTCGTTA...

Gene: PMI2109: Magnesium transporter
*
Photorhabdus luminescens subsp. laumondii TTO1

Site:
position = -247
score = 133.89
sequence = TGCAGTATCTCGTTA...

Gene: plu3736: Magnesium transporter
Magnesium transporter
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD