Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog glmS - Bacillales

Properties
Regulator type: RNA regulatory element
Name: glmS
RFAM: RF00234
Regulation mode:
Biological process: Amino sugar metabolism
Effector: Glucosamine-6-phosphate
Phylum: Firmicutes
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Bacillus subtilis subsp. subtilis str. 168 1 1
Bacillus amyloliquefaciens FZB42 1 1
Bacillus pumilus SAFR-032 1 1
Bacillus licheniformis DSM 13 1 1
Anoxybacillus flavithermus WK1 1 1
Geobacillus kaustophilus HTA426 1 1
Bacillus cereus ATCC 14579 1 1
Bacillus halodurans C-125 1 1
Bacillus clausii KSM-K16 1 1
Oceanobacillus iheyensis HTE831 1 1
Paenibacillus sp. JDR-2 1 1
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
glmS
*
Bacillus subtilis subsp. subtilis str. 168

Site:
position = -259
score = 136.06
sequence = CTATAATTATAGCGC...

Gene: BSU01780: Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16)
*
Bacillus amyloliquefaciens FZB42

Site:
position = -260
score = 131.7
sequence = TTATAATTACAGCGC...

Gene: RBAM_002320: Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16)
*
Bacillus pumilus SAFR-032

Site:
position = -269
score = 129.41
sequence = TTATAATTATAGCGC...

Gene: BPUM_0165: Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16)
*
Bacillus licheniformis DSM 13

Site:
position = -268
score = 134.03
sequence = TTATAGTTATAGCGC...

Gene: BLi00204: Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16)
*
Anoxybacillus flavithermus WK1

Site:
position = -233
score = 139.16
sequence = GTTTCACAAAAGCGC...

Gene: Aflv_0152: Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16)
*
Geobacillus kaustophilus HTA426

Site:
position = -296
score = 134.86
sequence = ACGAGACAAAAGCGC...

Gene: GK0155: Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16)
*
Bacillus cereus ATCC 14579

Site:
position = -346
score = 120.06
sequence = AAATTATAAAAGCGC...

Gene: BC0190: Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16)
*
Bacillus halodurans C-125

Site:
position = -241
score = 125.85
sequence = TGACAGTTGAAGCGC...

Gene: BH0268: Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16)
*
Bacillus clausii KSM-K16

Site:
position = -224
score = 114.56
sequence = CATACACCAAAGCGC...

Gene: ABC0245: Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16)
*
Oceanobacillus iheyensis HTE831

Site:
position = -321
score = 129.34
sequence = TATAATCAAAAGCGC...

Gene: OB0235: Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16)
*
Paenibacillus sp. JDR-2

Site:
position = -376
score = 67.59
sequence = TCACGTTTTATAAGC...

Gene: Pjdr2_5628: Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16)
Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16)
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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