Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog glmS - Staphylococcaceae

Properties
Regulator type: RNA regulatory element
Name: glmS
RFAM: RF00234
Regulation mode:
Biological process: Amino sugar metabolism
Effector: Glucosamine-6-phosphate
Phylum: Firmicutes
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Staphylococcus aureus subsp. aureus N315 1 1
Staphylococcus capitis SK14 1 1
Staphylococcus epidermidis ATCC 12228 1 1
Staphylococcus carnosus subsp. carnosus TM300 1 1
Staphylococcus haemolyticus JCSC1435 1 1
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 1 1
Macrococcus caseolyticus JCSC5402 1 1
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
glmS
*
Staphylococcus aureus subsp. aureus N315

Site:
position = -419
score = 126.0
sequence = CAGTACAGTTAAAGC...

Gene: SA1959: Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16)
*
Staphylococcus capitis SK14

Site:
position = -386
score = 114.96
sequence = ATAAATAGTTATAGC...

Gene: STACA0001_0856: Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16)
*
Staphylococcus epidermidis ATCC 12228

Site:
position = -387
score = 125.01
sequence = ATTAATAATTAAAGC...

Gene: SE1751: Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16)
*
Staphylococcus carnosus subsp. carnosus TM300

Site:
position = -413
score = 103.6
sequence = AGATATAATTATAGC...

Gene: Sca_1657: Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16)
*
Staphylococcus haemolyticus JCSC1435

Site:
position = -384
score = 114.16
sequence = TAAATTATAAAGCGC...

Gene: SH0880: Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16)
*
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305

Site:
position = -391
score = 121.11
sequence = GTTCAATTAAAGCGC...

Gene: SSP0729: Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16)
*
Macrococcus caseolyticus JCSC5402

Site:
position = -206
score = 98.61
sequence = CTGAATATACAGCGC...

Gene: MCCL_0324: Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16)
Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16)
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD