Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog AgaR - Psychromonadaceae/Aeromonadales

Properties
Regulator type: Transcription factor
Regulator family: DeoR
Regulation mode: repressor
Biological process: N-acetylgalactosamine utilization
Effector: N-acetylgalactosamine-6-phosphate; Galactosamine-6-phosphate
Phylum: Proteobacteria
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 12 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Psychromonas ingrahamii 37
Psychromonas sp. CNPT3 4 2
Moritella sp. PE36
Aeromonas hydrophila subsp. hydrophila ATCC 7966 10 2
Aeromonas salmonicida subsp. salmonicida A449
Tolumonas auensis DSM 9187
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
agaR
 
Psychromonas ingrahamii 37
*
Psychromonas sp. CNPT3

Site:
position = -143
score = -0.72971
sequence = AAAAGGAAATGAAAG

Site:
position = -221
score = -0.966611
sequence = ACAATAAAATGAAAG

Site:
position = -201
score = -0.442805
sequence = AAAACAAAACGAAAG

Gene: PCNPT3_13671: N-acetylgalactosamine-6-phosphate deacetylase (EC 3.5.1.25)
 
Moritella sp. PE36
*
Aeromonas hydrophila subsp. hydrophila ATCC 7966

Site:
position = -50
score = 0.0782456
sequence = GTAACGAAGTGAAAG

Site:
position = -199
score = -0.213964
sequence = GAAACGAAATAAAAG

Site:
position = -153
score = -0.712886
sequence = GAAATGAATCGAAAG

Gene: AHA_0813: N-acetylgalactosamine-6-phosphate deacetylase (EC 3.5.1.25)
 
Aeromonas salmonicida subsp. salmonicida A449
 
Tolumonas auensis DSM 9187
N-acetylgalactosamine-6-phosphate deacetylase (EC 3.5.1.25)
 
CRON 2.
agaZ
 
Psychromonas ingrahamii 37
 
Psychromonas sp. CNPT3

Gene: PCNPT3_12028: Tagatose-6-phosphate kinase (EC 2.7.1.144)
 
Moritella sp. PE36
*
Aeromonas hydrophila subsp. hydrophila ATCC 7966

Site:
position = -134
score = 5.62484
sequence = CTTTCGATTCATTTC

Site:
position = -88
score = 4.93865
sequence = CTTTTATTTCGTTTC

Site:
position = -237
score = 4.70528
sequence = CTTTCACTTCGTTAC

Gene: AHA_0812: Tagatose-6-phosphate kinase (EC 2.7.1.144)
 
Aeromonas salmonicida subsp. salmonicida A449
 
Tolumonas auensis DSM 9187
Tagatose-6-phosphate kinase (EC 2.7.1.144)
agaS
 
Psychromonas ingrahamii 37
 
Psychromonas sp. CNPT3

Gene: PCNPT3_12023: Galactosamine-6-phosphate isomerase (EC 5.3.1.-)
 
Moritella sp. PE36
 
Aeromonas hydrophila subsp. hydrophila ATCC 7966

Gene: AHA_0811: Galactosamine-6-phosphate isomerase (EC 5.3.1.-)
 
Aeromonas salmonicida subsp. salmonicida A449
 
Tolumonas auensis DSM 9187
Galactosamine-6-phosphate isomerase (EC 5.3.1.-)
agaV
 
Psychromonas ingrahamii 37
*
Psychromonas sp. CNPT3

Site:
position = -128
score = 4.97722
sequence = CTTTCATTTTATTGT

Site:
position = -206
score = 5.36998
sequence = CTTTCATTTCCTTTT

Site:
position = -148
score = 5.77223
sequence = CTTTCGTTTTGTTTT

Gene: PCNPT3_13666: PTS system, N-acetylgalactosamine-specific IIB component (EC 2.7.1.69)
 
Moritella sp. PE36
 
Aeromonas hydrophila subsp. hydrophila ATCC 7966

Gene: AHA_0810: PTS system, N-acetylgalactosamine-specific IIB component (EC 2.7.1.69)
 
Aeromonas salmonicida subsp. salmonicida A449
 
Tolumonas auensis DSM 9187
PTS system, N-acetylgalactosamine-specific IIB component (EC 2.7.1.69)
agaW
 
Psychromonas ingrahamii 37
 
Psychromonas sp. CNPT3

Gene: PCNPT3_13661: PTS system, N-acetylgalactosamine-specific IIC component (EC 2.7.1.69)
 
Moritella sp. PE36
 
Aeromonas hydrophila subsp. hydrophila ATCC 7966

Gene: AHA_0809: PTS system, N-acetylgalactosamine-specific IIC component (EC 2.7.1.69)
 
Aeromonas salmonicida subsp. salmonicida A449
 
Tolumonas auensis DSM 9187
PTS system, N-acetylgalactosamine-specific IIC component (EC 2.7.1.69)
agaE
 
Psychromonas ingrahamii 37
 2
Psychromonas sp. CNPT3

Gene: PCNPT3_13645: PTS system, N-acetylgalactosamine-specific IID component (EC 2.7.1.69)

Gene: PCNPT3_13656: PTS system, N-acetylgalactosamine-specific IID component (EC 2.7.1.69)
 
Moritella sp. PE36
 
Aeromonas hydrophila subsp. hydrophila ATCC 7966

Gene: AHA_0808: PTS system, N-acetylgalactosamine-specific IID component (EC 2.7.1.69)
 
Aeromonas salmonicida subsp. salmonicida A449
 
Tolumonas auensis DSM 9187
PTS system, N-acetylgalactosamine-specific IID component (EC 2.7.1.69)
agaF
 
Psychromonas ingrahamii 37
 
Psychromonas sp. CNPT3

Gene: PCNPT3_13640: PTS system, N-acetylgalactosamine- and galactosamine-specific IIA component (EC 2.7.1.69)
 
Moritella sp. PE36
 
Aeromonas hydrophila subsp. hydrophila ATCC 7966

Gene: AHA_0807: PTS system, N-acetylgalactosamine- and galactosamine-specific IIA component (EC 2.7.1.69)
 
Aeromonas salmonicida subsp. salmonicida A449
 
Tolumonas auensis DSM 9187
PTS system, N-acetylgalactosamine- and galactosamine-specific IIA component (EC 2.7.1.69)
agaA
 
Psychromonas ingrahamii 37
 
Psychromonas sp. CNPT3
 
Moritella sp. PE36
 
Aeromonas hydrophila subsp. hydrophila ATCC 7966

Gene: AHA_0806: N-acetylgalactosamine-6-phosphate deacetylase (EC 3.5.1.25)
 
Aeromonas salmonicida subsp. salmonicida A449
 
Tolumonas auensis DSM 9187
N-acetylgalactosamine-6-phosphate deacetylase (EC 3.5.1.25)
agaY
 
Psychromonas ingrahamii 37
 
Psychromonas sp. CNPT3
 
Moritella sp. PE36
 
Aeromonas hydrophila subsp. hydrophila ATCC 7966

Gene: AHA_0805: Tagatose-1,6-bisphosphate aldolase (EC 4.1.2.-)
 
Aeromonas salmonicida subsp. salmonicida A449
 
Tolumonas auensis DSM 9187
Tagatose-1,6-bisphosphate aldolase (EC 4.1.2.-)
agaH
 
Psychromonas ingrahamii 37
 
Psychromonas sp. CNPT3
 
Moritella sp. PE36
 
Aeromonas hydrophila subsp. hydrophila ATCC 7966

Gene: AHA_0804: Predicted secreted ?-N-acetylgalactosaminidase (EC 3.2.1.49), GH36 family
 
Aeromonas salmonicida subsp. salmonicida A449
 
Tolumonas auensis DSM 9187
Predicted secreted ?-N-acetylgalactosaminidase (EC 3.2.1.49), GH36 family
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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