Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog Glycine - Enterobacteriales

Properties
Regulator type: RNA regulatory element
Name: Glycine
RFAM: RF00504
Regulation mode:
Biological process: Glycine metabolism
Effector: Glycine
Phylum: Proteobacteria
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Escherichia coli str. K-12 substr. MG1655
Salmonella typhimurium LT2
Citrobacter koseri ATCC BAA-895
Klebsiella pneumoniae subsp. pneumoniae MGH 78578
Enterobacter sp. 638
Erwinia amylovora ATCC 49946
Yersinia pestis KIM
Serratia proteamaculans 568
Erwinia carotovora subsp. atroseptica SCRI1043 1 1
Edwardsiella tarda EIB202
Proteus mirabilis HI4320
Photorhabdus luminescens subsp. laumondii TTO1
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
yicG
 
Escherichia coli str. K-12 substr. MG1655

Gene: b3646: Putative inner membrane protein
 
Salmonella typhimurium LT2

Gene: STM3738: Putative inner membrane protein
 
Citrobacter koseri ATCC BAA-895

Gene: CKO_05103: Putative inner membrane protein
 
Klebsiella pneumoniae subsp. pneumoniae MGH 78578

Gene: KPN_03994: Putative inner membrane protein
 
Enterobacter sp. 638

Gene: Ent638_0094: Putative inner membrane protein
 
Erwinia amylovora ATCC 49946

Gene: EAM_0047: Putative inner membrane protein
 
Yersinia pestis KIM

Gene: y0099: Putative inner membrane protein
 
Serratia proteamaculans 568

Gene: Spro_4863: Putative inner membrane protein
*
Erwinia carotovora subsp. atroseptica SCRI1043

Site:
position = -118
score = 54.34
sequence = ATTGAAGCCAACTGG...

Site:
position = -249
score = 40.03
sequence = TCCGCTCCTCGCAGG...

Gene: ECA2334: Putative inner membrane protein
 
Edwardsiella tarda EIB202

Gene: ETAE_0032: Putative inner membrane protein
 
Proteus mirabilis HI4320

Gene: PMI2861: Putative inner membrane protein
 
Photorhabdus luminescens subsp. laumondii TTO1

Gene: plu0287: Putative inner membrane protein
Putative inner membrane protein
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD