Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog Glycine - Staphylococcaceae

Properties
Regulator type: RNA regulatory element
Name: Glycine
RFAM: RF00504
Regulation mode:
Biological process: Glycine metabolism
Effector: Glycine
Phylum: Firmicutes
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Staphylococcus aureus subsp. aureus N315 3 1
Staphylococcus capitis SK14 3 1
Staphylococcus epidermidis ATCC 12228 3 1
Staphylococcus carnosus subsp. carnosus TM300 4 1
Staphylococcus haemolyticus JCSC1435 3 1
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 3 1
Macrococcus caseolyticus JCSC5402 3 1
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
gcvT
*
Staphylococcus aureus subsp. aureus N315

Site:
position = -173
score = 68.14
sequence = AGTGATCAGTATTAG...

Gene: SA1367: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)
*
Staphylococcus capitis SK14

Site:
position = -213
score = 44.55
sequence = ATTGATCAGTATTAG...

Gene: STACA0001_1774: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)
*
Staphylococcus epidermidis ATCC 12228

Site:
position = -222
score = 51.94
sequence = ATTGATCAGTATTAG...

Gene: SE1222: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)
*
Staphylococcus carnosus subsp. carnosus TM300

Site:
position = -214
score = 55.81
sequence = AATGATCAGTATTGG...

Gene: Sca_1161: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)
*
Staphylococcus haemolyticus JCSC1435

Site:
position = -191
score = 53.22
sequence = TGATCAGTATTAGAG...

Gene: SH1379: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)
*
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305

Site:
position = -186
score = 61.56
sequence = TGATCAGTATTAGAG...

Gene: SSP1218: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)
*
Macrococcus caseolyticus JCSC5402

Site:
position = -119
score = 57.89
sequence = GAAGAAGGAAATTAG...

Site:
position = -119
score = 57.89
sequence = GAAGAAGGAAATTAG...

Gene: MCCL_1181: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)
Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)
gcvP1
 
Staphylococcus aureus subsp. aureus N315

Gene: SA1366: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P1 protein) (EC 1.4.4.2)
 
Staphylococcus capitis SK14

Gene: STACA0001_1773: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P1 protein) (EC 1.4.4.2)
 
Staphylococcus epidermidis ATCC 12228

Gene: SE1221: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P1 protein) (EC 1.4.4.2)
 
Staphylococcus carnosus subsp. carnosus TM300

Gene: Sca_1160: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P1 protein) (EC 1.4.4.2)
 
Staphylococcus haemolyticus JCSC1435

Gene: SH1380: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P1 protein) (EC 1.4.4.2)
 
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305

Gene: SSP1219: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P1 protein) (EC 1.4.4.2)
 
Macrococcus caseolyticus JCSC5402

Gene: MCCL_1180: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P1 protein) (EC 1.4.4.2)
Glycine dehydrogenase [decarboxylating] (glycine cleavage system P1 protein) (EC 1.4.4.2)
gcvP2
 
Staphylococcus aureus subsp. aureus N315

Gene: SA1365: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P2 protein) (EC 1.4.4.2)
 
Staphylococcus capitis SK14

Gene: STACA0001_1772: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P2 protein) (EC 1.4.4.2)
 
Staphylococcus epidermidis ATCC 12228

Gene: SE1220: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P2 protein) (EC 1.4.4.2)
 2
Staphylococcus carnosus subsp. carnosus TM300

Gene: Sca_1158: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P2 protein) (EC 1.4.4.2)

Gene: Sca_1159: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P2 protein) (EC 1.4.4.2)
 
Staphylococcus haemolyticus JCSC1435

Gene: SH1381: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P2 protein) (EC 1.4.4.2)
 
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305

Gene: SSP1220: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P2 protein) (EC 1.4.4.2)
 
Macrococcus caseolyticus JCSC5402

Gene: MCCL_1179: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P2 protein) (EC 1.4.4.2)
Glycine dehydrogenase [decarboxylating] (glycine cleavage system P2 protein) (EC 1.4.4.2)
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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