Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog UxuR - Pasteurellales

Properties
Regulator type: Transcription factor
Regulator family: GntR/Others
Regulation mode: repressor
Biological process: Glucuronate utilization
Effector: Glucuronate
Phylum: Proteobacteria
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 19 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Haemophilus influenzae Rd KW20 9 2
Aggregatibacter aphrophilus NJ8700
Pasteurella multocida subsp. multocida str. Pm70
Mannheimia succiniciproducens MBEL55E 10 2
Actinobacillus succinogenes 130Z 9 3
Haemophilus somnus 2336 13 5
Actinobacillus pleuropneumoniae serovar 7 str. AP76
Haemophilus ducreyi 35000HP
Haemophilus parasuis SH0165
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
uxuQ
 
Haemophilus influenzae Rd KW20
 
Aggregatibacter aphrophilus NJ8700
 
Pasteurella multocida subsp. multocida str. Pm70
*
Mannheimia succiniciproducens MBEL55E

Site:
position = -178
score = 5.02396
sequence = CAAATGGTATACCAAAAT

Site:
position = -63
score = 6.09772
sequence = ATATTGGTTTACCAATTT

Gene: MS0541: predicted glucuronate TRAP transporter, small subunit
*
Actinobacillus succinogenes 130Z

Site:
position = -171
score = 5.22353
sequence = AAAATGGTATACCGATTT

Site:
position = -56
score = 5.86956
sequence = ATATTGGTTTACCAATTA

Gene: Asuc_0147: predicted glucuronate TRAP transporter, small subunit
 
Haemophilus somnus 2336
 
Actinobacillus pleuropneumoniae serovar 7 str. AP76
 
Haemophilus ducreyi 35000HP
 
Haemophilus parasuis SH0165
predicted glucuronate TRAP transporter, small subunit
uxuM
 
Haemophilus influenzae Rd KW20
 
Aggregatibacter aphrophilus NJ8700
 
Pasteurella multocida subsp. multocida str. Pm70
 
Mannheimia succiniciproducens MBEL55E

Gene: MS0540: predicted glucuronate TRAP transporter, large subunit
 
Actinobacillus succinogenes 130Z

Gene: Asuc_0148: predicted glucuronate TRAP transporter, large subunit
 
Haemophilus somnus 2336
 
Actinobacillus pleuropneumoniae serovar 7 str. AP76
 
Haemophilus ducreyi 35000HP
 
Haemophilus parasuis SH0165
predicted glucuronate TRAP transporter, large subunit
lfaA
 
Haemophilus influenzae Rd KW20
 
Aggregatibacter aphrophilus NJ8700
 
Pasteurella multocida subsp. multocida str. Pm70
 
Mannheimia succiniciproducens MBEL55E

Gene: MS0539: Alpha-glucosidase (EC 3.2.1.20)
 
Actinobacillus succinogenes 130Z

Gene: Asuc_0149: Alpha-glucosidase (EC 3.2.1.20)
 
Haemophilus somnus 2336
 
Actinobacillus pleuropneumoniae serovar 7 str. AP76
 
Haemophilus ducreyi 35000HP
 
Haemophilus parasuis SH0165
Alpha-glucosidase (EC 3.2.1.20)
uxuR
*
Haemophilus influenzae Rd KW20

Site:
position = -78
score = 4.73721
sequence = TTTTTGGAATACCAAATA

Site:
position = -28
score = 5.63224
sequence = AAATTGGAATACCAATTT

Gene: HI0054: Hexuronate utilization operon transcriptional repressor UxuR
 
Aggregatibacter aphrophilus NJ8700
 
Pasteurella multocida subsp. multocida str. Pm70
 
Mannheimia succiniciproducens MBEL55E

Gene: MS0538: Hexuronate utilization operon transcriptional repressor UxuR
 
Actinobacillus succinogenes 130Z

Gene: Asuc_0150: Hexuronate utilization operon transcriptional repressor UxuR
*2
Haemophilus somnus 2336

Site:
position = -68
score = 4.52116
sequence = AATTTGGTGAACCAGAAA

Site:
position = -196
score = 5.22709
sequence = AAACTGGTAAACCAGTTA

Gene: HSM_0414: Hexuronate utilization operon transcriptional repressor UxuR

Site:
position = -78
score = 5.13342
sequence = TTTTTGGTATTCCAATTT

Gene: HSM_1913: Hexuronate utilization operon transcriptional repressor UxuR
 
Actinobacillus pleuropneumoniae serovar 7 str. AP76
 
Haemophilus ducreyi 35000HP
 
Haemophilus parasuis SH0165
Hexuronate utilization operon transcriptional repressor UxuR
uxuA
 
Haemophilus influenzae Rd KW20

Gene: HI0055: Mannonate dehydratase (EC 4.2.1.8)
 
Aggregatibacter aphrophilus NJ8700
 
Pasteurella multocida subsp. multocida str. Pm70
 
Mannheimia succiniciproducens MBEL55E

Gene: MS0537: Mannonate dehydratase (EC 4.2.1.8)
 
Actinobacillus succinogenes 130Z

Gene: Asuc_0151: Mannonate dehydratase (EC 4.2.1.8)
 
Haemophilus somnus 2336

Gene: HSM_0415: Mannonate dehydratase (EC 4.2.1.8)
 
Actinobacillus pleuropneumoniae serovar 7 str. AP76
 
Haemophilus ducreyi 35000HP
 
Haemophilus parasuis SH0165
Mannonate dehydratase (EC 4.2.1.8)
 
CRON 2.
HI0053
*
Haemophilus influenzae Rd KW20

Site:
position = -150
score = 5.63716
sequence = AAATTGGTATTCCAATTT

Site:
position = -100
score = 4.6572
sequence = TATTTGGTATTCCAAAAA

Gene: HI0053: Oxidoreductase, zinc-binding dehydrogenase family (EC 1.1.1.-)
 
Aggregatibacter aphrophilus NJ8700
 
Pasteurella multocida subsp. multocida str. Pm70
 
Mannheimia succiniciproducens MBEL55E
 
Actinobacillus succinogenes 130Z
*
Haemophilus somnus 2336

Site:
position = -101
score = 5.05053
sequence = AAATTGGAATACCAAAAA

Gene: HSM_1914: Oxidoreductase, zinc-binding dehydrogenase family (EC 1.1.1.-)
 
Actinobacillus pleuropneumoniae serovar 7 str. AP76
 
Haemophilus ducreyi 35000HP
 
Haemophilus parasuis SH0165
Oxidoreductase, zinc-binding dehydrogenase family (EC 1.1.1.-)
uxuP
 
Haemophilus influenzae Rd KW20

Gene: HI0052: predicted glucuronate TRAP transporter, periplasmic subunit
 
Aggregatibacter aphrophilus NJ8700
 
Pasteurella multocida subsp. multocida str. Pm70
*2
Mannheimia succiniciproducens MBEL55E

Site:
position = -69
score = 5.98817
sequence = AAATTGGTAAACCAATAT

Gene: MS0542: predicted glucuronate TRAP transporter, periplasmic subunit

Gene: MS0526: predicted glucuronate TRAP transporter, periplasmic subunit
*2
Actinobacillus succinogenes 130Z

Site:
position = -85
score = 5.12543
sequence = AAATCGGTATACCATTTT

Site:
position = -200
score = 5.81867
sequence = TAATTGGTAAACCAATAT

Gene: Asuc_0146: predicted glucuronate TRAP transporter, periplasmic subunit

Gene: Asuc_0145: predicted glucuronate TRAP transporter, periplasmic subunit
 
Haemophilus somnus 2336

Gene: HSM_1915: predicted glucuronate TRAP transporter, periplasmic subunit
 
Actinobacillus pleuropneumoniae serovar 7 str. AP76
 
Haemophilus ducreyi 35000HP
 
Haemophilus parasuis SH0165
predicted glucuronate TRAP transporter, periplasmic subunit
uxuQ
 
Haemophilus influenzae Rd KW20

Gene: HI0051: predicted hexuronate TRAP transporter, small subunit
 
Aggregatibacter aphrophilus NJ8700
 
Pasteurella multocida subsp. multocida str. Pm70
 
Mannheimia succiniciproducens MBEL55E

Gene: MS0527: predicted hexuronate TRAP transporter, small subunit
 
Actinobacillus succinogenes 130Z
 
Haemophilus somnus 2336

Gene: HSM_1916: predicted hexuronate TRAP transporter, small subunit
 
Actinobacillus pleuropneumoniae serovar 7 str. AP76
 
Haemophilus ducreyi 35000HP
 
Haemophilus parasuis SH0165
predicted hexuronate TRAP transporter, small subunit
uxuM
 
Haemophilus influenzae Rd KW20

Gene: HI0050m: predicted hexuronate TRAP transporter, large subunit
 
Aggregatibacter aphrophilus NJ8700
 
Pasteurella multocida subsp. multocida str. Pm70
 
Mannheimia succiniciproducens MBEL55E

Gene: MS0528: predicted hexuronate TRAP transporter, large subunit
 
Actinobacillus succinogenes 130Z
 
Haemophilus somnus 2336

Gene: HSM_1917: predicted hexuronate TRAP transporter, large subunit
 
Actinobacillus pleuropneumoniae serovar 7 str. AP76
 
Haemophilus ducreyi 35000HP
 
Haemophilus parasuis SH0165
predicted hexuronate TRAP transporter, large subunit
kdgK
 
Haemophilus influenzae Rd KW20

Gene: HI0049: 2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45)
 
Aggregatibacter aphrophilus NJ8700
 
Pasteurella multocida subsp. multocida str. Pm70
 
Mannheimia succiniciproducens MBEL55E

Gene: MS0545: 2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45)
 
Actinobacillus succinogenes 130Z

Gene: Asuc_0153: 2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45)
 
Haemophilus somnus 2336
 
Actinobacillus pleuropneumoniae serovar 7 str. AP76
 
Haemophilus ducreyi 35000HP
 
Haemophilus parasuis SH0165
2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45)
uxuB
 
Haemophilus influenzae Rd KW20

Gene: HI0048: D-mannonate oxidoreductase (EC 1.1.1.57)
 
Aggregatibacter aphrophilus NJ8700
 
Pasteurella multocida subsp. multocida str. Pm70
 
Mannheimia succiniciproducens MBEL55E

Gene: MS0543: D-mannonate oxidoreductase (EC 1.1.1.57)
 
Actinobacillus succinogenes 130Z
*
Haemophilus somnus 2336

Site:
position = -199
score = 4.82761
sequence = TTTCTGGTTCACCAAATT

Site:
position = -71
score = 5.31038
sequence = TAACTGGTTTACCAGTTT

Gene: HSM_0413: D-mannonate oxidoreductase (EC 1.1.1.57)
 
Actinobacillus pleuropneumoniae serovar 7 str. AP76
 
Haemophilus ducreyi 35000HP
 
Haemophilus parasuis SH0165
D-mannonate oxidoreductase (EC 1.1.1.57)
eda
 
Haemophilus influenzae Rd KW20

Gene: HI0047: 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14)
 
Aggregatibacter aphrophilus NJ8700
 
Pasteurella multocida subsp. multocida str. Pm70
 
Mannheimia succiniciproducens MBEL55E

Gene: MS0546: 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14)
 
Actinobacillus succinogenes 130Z

Gene: Asuc_0152: 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14)
 
Haemophilus somnus 2336

Gene: HSM_0408: 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14)
 
Actinobacillus pleuropneumoniae serovar 7 str. AP76
 
Haemophilus ducreyi 35000HP
 
Haemophilus parasuis SH0165
2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14)
uxaC
 
Haemophilus influenzae Rd KW20
 
Aggregatibacter aphrophilus NJ8700
 
Pasteurella multocida subsp. multocida str. Pm70
 
Mannheimia succiniciproducens MBEL55E

Gene: MS0544: Uronate isomerase (EC 5.3.1.12)
 
Actinobacillus succinogenes 130Z
 
Haemophilus somnus 2336

Gene: HSM_0409: Uronate isomerase (EC 5.3.1.12)
 
Actinobacillus pleuropneumoniae serovar 7 str. AP76
 
Haemophilus ducreyi 35000HP
 
Haemophilus parasuis SH0165
Uronate isomerase (EC 5.3.1.12)
uidA
 
Haemophilus influenzae Rd KW20
 
Aggregatibacter aphrophilus NJ8700
 
Pasteurella multocida subsp. multocida str. Pm70
 
Mannheimia succiniciproducens MBEL55E
 
Actinobacillus succinogenes 130Z
*
Haemophilus somnus 2336

Site:
position = -119
score = 5.62151
sequence = AAATTGGTTTACCAAAAA

Gene: HSM_0411: beta-D-glucuronidase
 
Actinobacillus pleuropneumoniae serovar 7 str. AP76
 
Haemophilus ducreyi 35000HP
 
Haemophilus parasuis SH0165
beta-D-glucuronidase
uidB
 
Haemophilus influenzae Rd KW20
 
Aggregatibacter aphrophilus NJ8700
 
Pasteurella multocida subsp. multocida str. Pm70
 
Mannheimia succiniciproducens MBEL55E
 
Actinobacillus succinogenes 130Z
 
Haemophilus somnus 2336

Gene: HSM_0410: glucuronides GPH transporter
 
Actinobacillus pleuropneumoniae serovar 7 str. AP76
 
Haemophilus ducreyi 35000HP
 
Haemophilus parasuis SH0165
glucuronides GPH transporter
uxaA
 
Haemophilus influenzae Rd KW20
 
Aggregatibacter aphrophilus NJ8700
 
Pasteurella multocida subsp. multocida str. Pm70
 
Mannheimia succiniciproducens MBEL55E

Gene: MS0530: Altronate hydrolase (EC 4.2.1.7)
*
Actinobacillus succinogenes 130Z

Site:
position = -227
score = 5.21752
sequence = ACATTGGTTGACGAATTT

Gene: Asuc_0154: Altronate hydrolase (EC 4.2.1.7)
 
Haemophilus somnus 2336
 
Actinobacillus pleuropneumoniae serovar 7 str. AP76
 
Haemophilus ducreyi 35000HP
 
Haemophilus parasuis SH0165
Altronate hydrolase (EC 4.2.1.7)
HSM_0412
 
Haemophilus influenzae Rd KW20
 
Aggregatibacter aphrophilus NJ8700
 
Pasteurella multocida subsp. multocida str. Pm70
 
Mannheimia succiniciproducens MBEL55E
 
Actinobacillus succinogenes 130Z
 
Haemophilus somnus 2336

Gene: HSM_0412: hypothetical protein
 
Actinobacillus pleuropneumoniae serovar 7 str. AP76
 
Haemophilus ducreyi 35000HP
 
Haemophilus parasuis SH0165
hypothetical protein
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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