Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog Mur - Rhodobacterales

Properties
Regulator type: Transcription factor
Regulator family: FUR
Regulation mode: repressor
Biological process: Manganese homeostasis
Effector: Manganese ion, (Mn2+)
Phylum: Proteobacteria
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 28 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Rhodobacter sphaeroides 2.4.1 4 1
Paracoccus denitrificans PD1222 5 2
Jannaschia sp. CCS1 4 1
Rhodobacterales bacterium HTCC2654 5 2
Oceanicola granulosus HTCC2516 1 1
Loktanella vestfoldensis SKA53 4 1
Oceanicola batsensis HTCC2597 4 1
Roseovarius nubinhibens ISM 1 1
Roseovarius sp. 217 4 1
Sulfitobacter sp. EE-36 5 2
Silicibacter TM1040 5 2
Silicibacter pomeroyi DSS-3 5 2
Roseobacter sp. MED193 5 2
Hyphomonas neptunium ATCC 15444
Oceanicaulis alexandrii HTCC2633
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
mur
 
Rhodobacter sphaeroides 2.4.1

Gene: RSP_2494: Manganese uptake regulation protein Mur
*
Paracoccus denitrificans PD1222

Site:
position = -35
score = 4.55567
sequence = GTTGCAATTTCTTCGCATC

Site:
position = -64
score = 4.58971
sequence = TCTGCGAACCATTCTCAAC

Gene: Pden_1260: Manganese uptake regulation protein Mur
 
Jannaschia sp. CCS1

Gene: Jann_1799: Manganese uptake regulation protein Mur
*
Rhodobacterales bacterium HTCC2654

Site:
position = -79
score = 5.65599
sequence = AGTGCAAATCATTTGCAAC

Site:
position = -127
score = 5.36051
sequence = GTTGCGAATGAATTGCAAC

Gene: RB2654_19538: Manganese uptake regulation protein Mur
 
Oceanicola granulosus HTCC2516

Gene: OG2516_03730: Manganese uptake regulation protein Mur
 
Loktanella vestfoldensis SKA53

Gene: SKA53_03101: Manganese uptake regulation protein Mur
 
Oceanicola batsensis HTCC2597

Gene: OB2597_02997: Manganese uptake regulation protein Mur
 
Roseovarius nubinhibens ISM

Gene: ISM_15430: Manganese uptake regulation protein Mur
 
Roseovarius sp. 217

Gene: ROS217_18337: Manganese uptake regulation protein Mur
*
Sulfitobacter sp. EE-36

Site:
position = -109
score = 4.9676
sequence = AATGCGAATTAGTCGCATA

Gene: EE36_12413: Manganese uptake regulation protein Mur
 
Silicibacter TM1040

Gene: TM1040_0928: Manganese uptake regulation protein Mur
 
Silicibacter pomeroyi DSS-3

Gene: SPO2477: Manganese uptake regulation protein Mur
 
Roseobacter sp. MED193

Gene: MED193_22541: Manganese uptake regulation protein Mur
 
Hyphomonas neptunium ATCC 15444
 
Oceanicaulis alexandrii HTCC2633
Manganese uptake regulation protein Mur
 
CRON 2.
mntX
 
Rhodobacter sphaeroides 2.4.1
 
Paracoccus denitrificans PD1222
 
Jannaschia sp. CCS1
 
Rhodobacterales bacterium HTCC2654
*
Oceanicola granulosus HTCC2516

Site:
position = -39
score = 5.89626
sequence = ATTGCGAATTATTCGCAAT

Gene: OG2516_13601: Predicted manganese transporter
 
Loktanella vestfoldensis SKA53
 
Oceanicola batsensis HTCC2597
*
Roseovarius nubinhibens ISM

Site:
position = -29
score = 5.66528
sequence = ATTGAGAATAATTCGCAAT

Gene: ISM_02005: Predicted manganese transporter
 
Roseovarius sp. 217
 
Sulfitobacter sp. EE-36
 
Silicibacter TM1040
 
Silicibacter pomeroyi DSS-3
 
Roseobacter sp. MED193
 
Hyphomonas neptunium ATCC 15444
 
Oceanicaulis alexandrii HTCC2633
Predicted manganese transporter
 
CRON 3.
irr
 
Rhodobacter sphaeroides 2.4.1

Gene: RSP_3179: Iron-responsive regulator Irr
 
Paracoccus denitrificans PD1222
 
Jannaschia sp. CCS1

Gene: Jann_1652: Iron-responsive regulator Irr
 
Rhodobacterales bacterium HTCC2654

Gene: RB2654_18263: Iron-responsive regulator Irr
 
Oceanicola granulosus HTCC2516

Gene: OG2516_14758: Iron-responsive regulator Irr
 
Loktanella vestfoldensis SKA53

Gene: SKA53_01126: Iron-responsive regulator Irr
 
Oceanicola batsensis HTCC2597

Gene: OB2597_14726: Iron-responsive regulator Irr
 
Roseovarius nubinhibens ISM

Gene: ISM_00785: Iron-responsive regulator Irr
 
Roseovarius sp. 217

Gene: ROS217_15500: Iron-responsive regulator Irr
 
Sulfitobacter sp. EE-36

Gene: EE36_03493: Iron-responsive regulator Irr
*
Silicibacter TM1040

Site:
position = -75
score = 4.50817
sequence = TTTGCAAATCCGTTTGAAA

Gene: TM1040_0183: Iron-responsive regulator Irr
*
Silicibacter pomeroyi DSS-3

Site:
position = -76
score = 4.17127
sequence = GATGAGAATGAAATTCATT

Gene: SPOA0445: Iron-responsive regulator Irr
*
Roseobacter sp. MED193

Site:
position = -40
score = 5.0197
sequence = AATGCAATTCATTCGCAGT

Gene: MED193_17849: Iron-responsive regulator Irr
 
Hyphomonas neptunium ATCC 15444
 
Oceanicaulis alexandrii HTCC2633
Iron-responsive regulator Irr
 
CRON 4.
sitA
*
Rhodobacter sphaeroides 2.4.1

Site:
position = -40
score = 5.22929
sequence = TTTGCGAATGCCTCGCATT

Gene: RSP_0904: Manganese ABC transporter, periplasmic-binding protein SitA
*
Paracoccus denitrificans PD1222

Site:
position = -89
score = 4.55567
sequence = GATGCGAAGAAATTGCAAC

Site:
position = -60
score = 4.58971
sequence = GTTGAGAATGGTTCGCAGA

Gene: Pden_1259: Manganese ABC transporter, periplasmic-binding protein SitA
*
Jannaschia sp. CCS1

Site:
position = -88
score = 5.0211
sequence = TTTGCAACTCACTCGCAAG

Site:
position = -58
score = 4.74288
sequence = CTTGCGAATAAGTCGCATA

Gene: Jann_2080: Manganese ABC transporter, periplasmic-binding protein SitA
*
Rhodobacterales bacterium HTCC2654

Site:
position = -117
score = 5.36051
sequence = GTTGCAATTCATTCGCAAC

Site:
position = -165
score = 5.65599
sequence = GTTGCAAATGATTTGCACT

Gene: RB2654_19543: Manganese ABC transporter, periplasmic-binding protein SitA
 
Oceanicola granulosus HTCC2516
*
Loktanella vestfoldensis SKA53

Site:
position = -63
score = 4.88858
sequence = GTTGCGAACGCTTCTCATT

Gene: SKA53_08116: Manganese ABC transporter, periplasmic-binding protein SitA
*
Oceanicola batsensis HTCC2597

Site:
position = -91
score = 5.46258
sequence = GTTGCGAATGGTTCGCATT

Site:
position = -60
score = 5.28141
sequence = GTTGCGAATGGTTCGCATC

Gene: OB2597_13568: Manganese ABC transporter, periplasmic-binding protein SitA
 
Roseovarius nubinhibens ISM
*
Roseovarius sp. 217

Site:
position = -28
score = 5.11613
sequence = GTTGCGAATAATTCTCATA

Gene: ROS217_05129: Manganese ABC transporter, periplasmic-binding protein SitA
*
Sulfitobacter sp. EE-36

Site:
position = -110
score = 4.9676
sequence = TATGCGACTAATTCGCATT

Gene: EE36_12418: Manganese ABC transporter, periplasmic-binding protein SitA
*
Silicibacter TM1040

Site:
position = -95
score = 4.50626
sequence = TGTGAGAATAATTCTCATT

Site:
position = -64
score = 4.66368
sequence = GTTGCGAAGCGTTCTCATA

Gene: TM1040_0098: Manganese ABC transporter, periplasmic-binding protein SitA
*
Silicibacter pomeroyi DSS-3

Site:
position = -84
score = 5.29749
sequence = CTTGCGAATAATTCTCAAT

Site:
position = -53
score = 5.0067
sequence = GTTGCGAATGGTTCTCATA

Gene: SPO3366: Manganese ABC transporter, periplasmic-binding protein SitA
*
Roseobacter sp. MED193

Site:
position = -56
score = 4.77572
sequence = GTTGAGAATCGTTCTCATA

Site:
position = -87
score = 5.11006
sequence = GTTGAGAATAATTCTCATT

Gene: MED193_12968: Manganese ABC transporter, periplasmic-binding protein SitA
 
Hyphomonas neptunium ATCC 15444
 
Oceanicaulis alexandrii HTCC2633
Manganese ABC transporter, periplasmic-binding protein SitA
sitB
 
Rhodobacter sphaeroides 2.4.1

Gene: RSP_0905: Manganese ABC transporter, ATP-binding protein SitB
 
Paracoccus denitrificans PD1222

Gene: Pden_1258: Manganese ABC transporter, ATP-binding protein SitB
 
Jannaschia sp. CCS1

Gene: Jann_2081: Manganese ABC transporter, ATP-binding protein SitB
 
Rhodobacterales bacterium HTCC2654

Gene: RB2654_19548: Manganese ABC transporter, ATP-binding protein SitB
 
Oceanicola granulosus HTCC2516
 
Loktanella vestfoldensis SKA53

Gene: SKA53_08121: Manganese ABC transporter, ATP-binding protein SitB
 
Oceanicola batsensis HTCC2597

Gene: OB2597_13573: Manganese ABC transporter, ATP-binding protein SitB
 
Roseovarius nubinhibens ISM
 
Roseovarius sp. 217

Gene: ROS217_05124: Manganese ABC transporter, ATP-binding protein SitB
 
Sulfitobacter sp. EE-36

Gene: EE36_12423: Manganese ABC transporter, ATP-binding protein SitB
 
Silicibacter TM1040

Gene: TM1040_0099: Manganese ABC transporter, ATP-binding protein SitB
 
Silicibacter pomeroyi DSS-3

Gene: SPO3365: Manganese ABC transporter, ATP-binding protein SitB
 
Roseobacter sp. MED193

Gene: MED193_12963: Manganese ABC transporter, ATP-binding protein SitB
 
Hyphomonas neptunium ATCC 15444
 
Oceanicaulis alexandrii HTCC2633
Manganese ABC transporter, ATP-binding protein SitB
sitC
 
Rhodobacter sphaeroides 2.4.1

Gene: RSP_0906: Manganese ABC transporter, inner membrane permease protein SitC
 
Paracoccus denitrificans PD1222

Gene: Pden_1257: Manganese ABC transporter, inner membrane permease protein SitC
 
Jannaschia sp. CCS1

Gene: Jann_2082: Manganese ABC transporter, inner membrane permease protein SitC
 
Rhodobacterales bacterium HTCC2654

Gene: RB2654_19553: Manganese ABC transporter, inner membrane permease protein SitC
 
Oceanicola granulosus HTCC2516
 
Loktanella vestfoldensis SKA53

Gene: SKA53_08126: Manganese ABC transporter, inner membrane permease protein SitC
 
Oceanicola batsensis HTCC2597

Gene: OB2597_13578: Manganese ABC transporter, inner membrane permease protein SitC
 
Roseovarius nubinhibens ISM
 
Roseovarius sp. 217

Gene: ROS217_05119: Manganese ABC transporter, inner membrane permease protein SitC
 
Sulfitobacter sp. EE-36

Gene: EE36_12428: Manganese ABC transporter, inner membrane permease protein SitC
 
Silicibacter TM1040

Gene: TM1040_0100: Manganese ABC transporter, inner membrane permease protein SitC
 
Silicibacter pomeroyi DSS-3

Gene: SPO3364: Manganese ABC transporter, inner membrane permease protein SitC
 
Roseobacter sp. MED193

Gene: MED193_12958: Manganese ABC transporter, inner membrane permease protein SitC
 
Hyphomonas neptunium ATCC 15444
 
Oceanicaulis alexandrii HTCC2633
Manganese ABC transporter, inner membrane permease protein SitC
sitD
 
Rhodobacter sphaeroides 2.4.1

Gene: RSP_0908: Manganese ABC transporter, inner membrane permease protein SitD
 
Paracoccus denitrificans PD1222

Gene: Pden_1256: Manganese ABC transporter, inner membrane permease protein SitD
 
Jannaschia sp. CCS1

Gene: Jann_2083: Manganese ABC transporter, inner membrane permease protein SitD
 
Rhodobacterales bacterium HTCC2654

Gene: RB2654_19558: Manganese ABC transporter, inner membrane permease protein SitD
 
Oceanicola granulosus HTCC2516
 
Loktanella vestfoldensis SKA53

Gene: SKA53_08131: Manganese ABC transporter, inner membrane permease protein SitD
 
Oceanicola batsensis HTCC2597

Gene: OB2597_13583: Manganese ABC transporter, inner membrane permease protein SitD
 
Roseovarius nubinhibens ISM
 
Roseovarius sp. 217

Gene: ROS217_05114: Manganese ABC transporter, inner membrane permease protein SitD
 
Sulfitobacter sp. EE-36

Gene: EE36_12433: Manganese ABC transporter, inner membrane permease protein SitD
 
Silicibacter TM1040

Gene: TM1040_0101: Manganese ABC transporter, inner membrane permease protein SitD
 
Silicibacter pomeroyi DSS-3

Gene: SPO3363: Manganese ABC transporter, inner membrane permease protein SitD
 
Roseobacter sp. MED193

Gene: MED193_12953: Manganese ABC transporter, inner membrane permease protein SitD
 
Hyphomonas neptunium ATCC 15444
 
Oceanicaulis alexandrii HTCC2633
Manganese ABC transporter, inner membrane permease protein SitD
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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