Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog Mur - Rhizobiales

Properties
Regulator type: Transcription factor
Regulator family: FUR
Regulation mode: repressor
Biological process: Manganese homeostasis
Effector: Iron ion, (Fe2+)
Phylum: Proteobacteria
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 28 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Sinorhizobium meliloti 1021 4 1
Rhizobium sp. NGR234 4 1
Rhizobium leguminosarum bv. viciae 3841 5 2
Rhizobium etli CFN 42 1 1
Agrobacterium tumefaciens str. C58 (Cereon) 5 2
Mesorhizobium sp. BNC1 5 2
Mesorhizobium loti MAFF303099
Brucella melitensis 16M 2 2
Bartonella quintana str. Toulouse 4 1
Rhodopseudomonas palustris CGA009 2 2
Bradyrhizobium japonicum USDA 110 3 3
Bradyrhizobium sp. BTAi1 3 3
Nitrobacter winogradskyi Nb-255 3 3
Azorhizobium caulinodans ORS 571 1 1
Xanthobacter autotrophicus Py2 4 1
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
RPA0472
 
Sinorhizobium meliloti 1021
 
Rhizobium sp. NGR234
 
Rhizobium leguminosarum bv. viciae 3841
 
Rhizobium etli CFN 42
 
Agrobacterium tumefaciens str. C58 (Cereon)
 
Mesorhizobium sp. BNC1
 
Mesorhizobium loti MAFF303099
 
Brucella melitensis 16M
 
Bartonella quintana str. Toulouse
 
Rhodopseudomonas palustris CGA009

Gene: RPA0472: Possible outer membrane protein
*
Bradyrhizobium japonicum USDA 110

Site:
position = -149
score = 5.31299
sequence = ATTGCGAATTAATCGCAAT

Gene: blr0095: Possible outer membrane protein
*
Bradyrhizobium sp. BTAi1

Site:
position = -161
score = 5.17919
sequence = TTTGCAAATTAATCGCAAT

Gene: BBta_7486: Possible outer membrane protein
 
Nitrobacter winogradskyi Nb-255

Gene: Nwi_0329: Possible outer membrane protein
 
Azorhizobium caulinodans ORS 571
 
Xanthobacter autotrophicus Py2
Possible outer membrane protein
 
CRON 2.
mntH
 
Sinorhizobium meliloti 1021
 
Rhizobium sp. NGR234
*
Rhizobium leguminosarum bv. viciae 3841

Site:
position = -69
score = 5.70716
sequence = GTTGCGAATGACTTGCATT

Gene: RL0940: Manganese transport protein MntH
*
Rhizobium etli CFN 42

Site:
position = -68
score = 5.70716
sequence = GTTGCGAATGACTTGCATT

Gene: RHE_CH00878: Manganese transport protein MntH
*
Agrobacterium tumefaciens str. C58 (Cereon)

Site:
position = 5
score = 5.70716
sequence = TATGAGAATGATTTGCAAT

Gene: Atu1736: Manganese transport protein MntH
*
Mesorhizobium sp. BNC1

Site:
position = -38
score = 5.24552
sequence = AATGCAAATAAGTCGCAAC

Gene: Meso_4120: Manganese transport protein MntH
 
Mesorhizobium loti MAFF303099

Gene: mlr2501: Manganese transport protein MntH
*
Brucella melitensis 16M

Site:
position = -44
score = 5.32606
sequence = AATGCAAATAGTTTGCAAC

Gene: BMEI0569: Manganese transport protein MntH
 
Bartonella quintana str. Toulouse
*
Rhodopseudomonas palustris CGA009

Site:
position = -47
score = 5.75472
sequence = ATTGCAAATGACTTGCAAG

Gene: RPA2706: Manganese transport protein MntH
*
Bradyrhizobium japonicum USDA 110

Site:
position = -46
score = 5.79845
sequence = GTTGCAAATGAGTTGCAAT

Gene: bll5044: Manganese transport protein MntH
*
Bradyrhizobium sp. BTAi1

Site:
position = -86
score = 5.15001
sequence = CTTGCAAATAAGTTGCATT

Gene: BBta_4658: Manganese transport protein MntH
*
Nitrobacter winogradskyi Nb-255

Site:
position = -53
score = 5.75472
sequence = TTTGCAAATGAGTTGCAAT

Gene: Nwi_1912: Manganese transport protein MntH
*
Azorhizobium caulinodans ORS 571

Site:
position = -83
score = 5.36707
sequence = CTTGCAAATCGTTCGCATT

Gene: AZC_3295: Manganese transport protein MntH
 
Xanthobacter autotrophicus Py2
Manganese transport protein MntH
 
CRON 3.
sitA
*
Sinorhizobium meliloti 1021

Site:
position = -80
score = 5.40787
sequence = GTTGCAAATGCTTCTCATT

Gene: SMc02509: Manganese ABC transporter, periplasmic-binding protein SitA
*
Rhizobium sp. NGR234

Site:
position = -82
score = 4.95492
sequence = GTTGCAAATGGTTCTCATG

Gene: NGR_c31020: Manganese ABC transporter, periplasmic-binding protein SitA
*
Rhizobium leguminosarum bv. viciae 3841

Site:
position = -138
score = 4.69739
sequence = GTTGCAATTCATTCTTAAT

Site:
position = -84
score = 5.40259
sequence = TTTGCAAATCATTCTGAAT

Gene: RL3884: Manganese ABC transporter, periplasmic-binding protein SitA
 
Rhizobium etli CFN 42
*
Agrobacterium tumefaciens str. C58 (Cereon)

Site:
position = -79
score = 6.07514
sequence = ATTGAGAATGATTTGCAAT

Site:
position = -27
score = 4.85711
sequence = ATTGCGAGTTAATCGCAAC

Gene: Atu4471: Manganese ABC transporter, periplasmic-binding protein SitA
*
Mesorhizobium sp. BNC1

Site:
position = -115
score = 5.78788
sequence = GTTGCAAATGGTTTGCAAT

Gene: Meso_2853: Manganese ABC transporter, periplasmic-binding protein SitA
 
Mesorhizobium loti MAFF303099
 
Brucella melitensis 16M
*
Bartonella quintana str. Toulouse

Site:
position = -33
score = 5.88636
sequence = AATGCAAATCATTGGCAAT

Gene: BQ00790: Manganese ABC transporter, periplasmic-binding protein SitA
 
Rhodopseudomonas palustris CGA009
 
Bradyrhizobium japonicum USDA 110
 
Bradyrhizobium sp. BTAi1
 
Nitrobacter winogradskyi Nb-255
 
Azorhizobium caulinodans ORS 571
*
Xanthobacter autotrophicus Py2

Site:
position = -90
score = 5.42669
sequence = AATGCGAATAAGTTGCAAT

Site:
position = -51
score = 4.84486
sequence = TTTGCAAATGGATCGCAAA

Gene: Xaut_1207: Manganese ABC transporter, periplasmic-binding protein SitA
Manganese ABC transporter, periplasmic-binding protein SitA
sitB
 
Sinorhizobium meliloti 1021

Gene: SMc02508: Manganese ABC transporter, ATP-binding protein SitB
 
Rhizobium sp. NGR234

Gene: NGR_c31030: Manganese ABC transporter, ATP-binding protein SitB
 
Rhizobium leguminosarum bv. viciae 3841

Gene: RL3885: Manganese ABC transporter, ATP-binding protein SitB
 
Rhizobium etli CFN 42
 
Agrobacterium tumefaciens str. C58 (Cereon)

Gene: Atu4470: Manganese ABC transporter, ATP-binding protein SitB
 
Mesorhizobium sp. BNC1

Gene: Meso_2852: Manganese ABC transporter, ATP-binding protein SitB
 
Mesorhizobium loti MAFF303099
 
Brucella melitensis 16M
 
Bartonella quintana str. Toulouse

Gene: BQ00800: Manganese ABC transporter, ATP-binding protein SitB
 
Rhodopseudomonas palustris CGA009
 
Bradyrhizobium japonicum USDA 110
 
Bradyrhizobium sp. BTAi1
 
Nitrobacter winogradskyi Nb-255
 
Azorhizobium caulinodans ORS 571
 
Xanthobacter autotrophicus Py2

Gene: Xaut_1206: Manganese ABC transporter, ATP-binding protein SitB
Manganese ABC transporter, ATP-binding protein SitB
sitC
 
Sinorhizobium meliloti 1021

Gene: SMc02507: Manganese ABC transporter, inner membrane permease protein SitC
 
Rhizobium sp. NGR234

Gene: NGR_c31040: Manganese ABC transporter, inner membrane permease protein SitC
 
Rhizobium leguminosarum bv. viciae 3841

Gene: RL3886: Manganese ABC transporter, inner membrane permease protein SitC
 
Rhizobium etli CFN 42
 
Agrobacterium tumefaciens str. C58 (Cereon)

Gene: Atu4469: Manganese ABC transporter, inner membrane permease protein SitC
 
Mesorhizobium sp. BNC1

Gene: Meso_2851: Manganese ABC transporter, inner membrane permease protein SitC
 
Mesorhizobium loti MAFF303099
 
Brucella melitensis 16M
 
Bartonella quintana str. Toulouse

Gene: BQ00810: Manganese ABC transporter, inner membrane permease protein SitC
 
Rhodopseudomonas palustris CGA009
 
Bradyrhizobium japonicum USDA 110
 
Bradyrhizobium sp. BTAi1
 
Nitrobacter winogradskyi Nb-255
 
Azorhizobium caulinodans ORS 571
 
Xanthobacter autotrophicus Py2

Gene: Xaut_1205: Manganese ABC transporter, inner membrane permease protein SitC
Manganese ABC transporter, inner membrane permease protein SitC
sitD
 
Sinorhizobium meliloti 1021

Gene: SMc02506: Manganese ABC transporter, inner membrane permease protein SitD
 
Rhizobium sp. NGR234

Gene: NGR_c31050: Manganese ABC transporter, inner membrane permease protein SitD
 
Rhizobium leguminosarum bv. viciae 3841

Gene: RL3887: Manganese ABC transporter, inner membrane permease protein SitD
 
Rhizobium etli CFN 42
 
Agrobacterium tumefaciens str. C58 (Cereon)

Gene: Atu4468: Manganese ABC transporter, inner membrane permease protein SitD
 
Mesorhizobium sp. BNC1

Gene: Meso_2850: Manganese ABC transporter, inner membrane permease protein SitD
 
Mesorhizobium loti MAFF303099
 
Brucella melitensis 16M
 
Bartonella quintana str. Toulouse

Gene: BQ00820: Manganese ABC transporter, inner membrane permease protein SitD
 
Rhodopseudomonas palustris CGA009
 
Bradyrhizobium japonicum USDA 110
 
Bradyrhizobium sp. BTAi1
 
Nitrobacter winogradskyi Nb-255
 
Azorhizobium caulinodans ORS 571
 
Xanthobacter autotrophicus Py2

Gene: Xaut_1204: Manganese ABC transporter, inner membrane permease protein SitD
Manganese ABC transporter, inner membrane permease protein SitD
 
CRON 4.
Nwi_3051
 
Sinorhizobium meliloti 1021
 
Rhizobium sp. NGR234
 
Rhizobium leguminosarum bv. viciae 3841
 
Rhizobium etli CFN 42
 
Agrobacterium tumefaciens str. C58 (Cereon)
 
Mesorhizobium sp. BNC1
 
Mesorhizobium loti MAFF303099
 
Brucella melitensis 16M
 
Bartonella quintana str. Toulouse
 
Rhodopseudomonas palustris CGA009
 
Bradyrhizobium japonicum USDA 110
 
Bradyrhizobium sp. BTAi1
*
Nitrobacter winogradskyi Nb-255

Site:
position = -64
score = 5.0483
sequence = CTTGCGAGGCATTCGCAAC

Gene: Nwi_3051: TonB-dependent receptor
 
Azorhizobium caulinodans ORS 571
 
Xanthobacter autotrophicus Py2
TonB-dependent receptor
 
CRON 5.
irr1
 
Sinorhizobium meliloti 1021
 
Rhizobium sp. NGR234
 
Rhizobium leguminosarum bv. viciae 3841
 
Rhizobium etli CFN 42
 
Agrobacterium tumefaciens str. C58 (Cereon)
 
Mesorhizobium sp. BNC1
 
Mesorhizobium loti MAFF303099
*
Brucella melitensis 16M

Site:
position = -200
score = 5.96905
sequence = ATTGCAAACCATTTGCAAT

Gene: BMEI1563: Iron-responsive regulator Irr paralog
 
Bartonella quintana str. Toulouse
*
Rhodopseudomonas palustris CGA009

Site:
position = -85
score = 4.3378
sequence = GTTGCGAAGCGCTTGCACC

Gene: RPA0424: Iron-responsive regulator Irr paralog
*
Bradyrhizobium japonicum USDA 110

Site:
position = -79
score = 4.33869
sequence = GTTGCGAGAAACTTGCATC

Gene: bll0768: Iron-responsive regulator Irr paralog
*
Bradyrhizobium sp. BTAi1

Site:
position = -76
score = 3.60195
sequence = GTTGCGATAAGCTTGCATC

Gene: BBta_0071: Iron-responsive regulator Irr paralog
*
Nitrobacter winogradskyi Nb-255

Site:
position = -95
score = 4.6134
sequence = GTTGCGAAAAACTTGCATC

Gene: Nwi_0035: Iron-responsive regulator Irr paralog
 
Azorhizobium caulinodans ORS 571
 
Xanthobacter autotrophicus Py2
Iron-responsive regulator Irr paralog
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes [ Tab delimited format ] DOWNLOAD
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