Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog NtrC - Comamonadaceae

Properties
Regulator type: Transcription factor
Regulator family: Fis
Regulation mode: activator (repressor)
Biological process: Nitrogen assimilation
Effector: Phosphorylated NtrB, signal histidine kinase
Phylum: Proteobacteria/beta
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 52 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Acidovorax avenae subsp. citrulli AAC00-1 11 4
Acidovorax sp. JS42 14 5
Comamonas testosteroni KF-1 11 4
Delftia acidovorans SPH-1 14 4
Polaromonas naphthalenivorans CJ2 10 3
Polaromonas sp. JS666 8 3
Rhodoferax ferrireducens DSM 15236 11 3
Variovorax paradoxus S110 14 5
Verminephrobacter eiseniae EF01-2 7 2
Methylibium petroleiphilum PM1 4 1
Leptothrix cholodnii SP-6 9 3
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
CHP02001
*
Acidovorax avenae subsp. citrulli AAC00-1

Site:
position = -180
score = 5.07315
sequence = CGCACCATTCGGGTGCG

Site:
position = -108
score = 4.63201
sequence = CGCACCCATTCGGAGCG

Gene: Aave_0232: Conserved hypothetical protein CHP02001
*
Acidovorax sp. JS42

Site:
position = -155
score = 5.04813
sequence = TGCACCAGGCTGGTGCG

Gene: Ajs_0162: Conserved hypothetical protein CHP02001
*
Comamonas testosteroni KF-1

Site:
position = -288
score = 4.88187
sequence = ATCACCTGTTTGGTGCA

Site:
position = -228
score = 5.5534
sequence = CGCACCATCTTGGTGCA

Gene: CtesDRAFT_4075: Conserved hypothetical protein CHP02001
*
Delftia acidovorans SPH-1

Site:
position = -208
score = 5.44106
sequence = TGCACTATCTTGGTGCA

Site:
position = -136
score = 4.72602
sequence = TGCACAAAGCCGGTGCA

Gene: Daci_0301: Conserved hypothetical protein CHP02001
 
Polaromonas naphthalenivorans CJ2
*
Polaromonas sp. JS666

Site:
position = -153
score = 5.45531
sequence = TGCGCCAACTTGGTGCA

Gene: Bpro_0182: Conserved hypothetical protein CHP02001
 
Rhodoferax ferrireducens DSM 15236
*
Variovorax paradoxus S110

Site:
position = -207
score = 4.86106
sequence = CTCACCATTGTGGTGCG

Gene: Vapar_0217: Conserved hypothetical protein CHP02001
*
Verminephrobacter eiseniae EF01-2

Site:
position = -202
score = 4.36901
sequence = CTCCCCGAATGGGTGCG

Gene: Veis_3315: Conserved hypothetical protein CHP02001
 
Methylibium petroleiphilum PM1
 
Leptothrix cholodnii SP-6
Conserved hypothetical protein CHP02001
glnK
 
Acidovorax avenae subsp. citrulli AAC00-1

Gene: Aave_0233: Nitrogen regulatory protein P-II
 
Acidovorax sp. JS42

Gene: Ajs_0163: Nitrogen regulatory protein P-II
 
Comamonas testosteroni KF-1

Gene: CtesDRAFT_4074: Nitrogen regulatory protein P-II
 
Delftia acidovorans SPH-1

Gene: Daci_0302: Nitrogen regulatory protein P-II
*
Polaromonas naphthalenivorans CJ2

Site:
position = -319
score = 4.68625
sequence = TGCATCAAAGTTGTGCA

Site:
position = -295
score = 4.54282
sequence = TGCATCATGATGGTGCG

Gene: Pnap_0120: Nitrogen regulatory protein P-II
 
Polaromonas sp. JS666

Gene: Bpro_0183: Nitrogen regulatory protein P-II
*
Rhodoferax ferrireducens DSM 15236

Site:
position = -203
score = 4.95303
sequence = TGCACCAAGTATGTGCG

Gene: Rfer_0472: Nitrogen regulatory protein P-II
 
Variovorax paradoxus S110

Gene: Vapar_0218: Nitrogen regulatory protein P-II
 
Verminephrobacter eiseniae EF01-2

Gene: Veis_3314: Nitrogen regulatory protein P-II
 
Methylibium petroleiphilum PM1

Gene: Mpe_A0171: Nitrogen regulatory protein P-II
*2
Leptothrix cholodnii SP-6

Site:
position = -193
score = 5.27882
sequence = TGCACTGAATTGGTGCC

Gene: Lcho_3942: Nitrogen regulatory protein P-II

Gene: Lcho_0156: Nitrogen regulatory protein P-II
Nitrogen regulatory protein P-II
amtB
 
Acidovorax avenae subsp. citrulli AAC00-1
 
Acidovorax sp. JS42

Gene: Ajs_0164: Ammonium transporter
 
Comamonas testosteroni KF-1

Gene: CtesDRAFT_4073: Ammonium transporter
 
Delftia acidovorans SPH-1

Gene: Daci_0303: Ammonium transporter
 
Polaromonas naphthalenivorans CJ2

Gene: Pnap_0121: Ammonium transporter
 
Polaromonas sp. JS666

Gene: Bpro_0184: Ammonium transporter
 
Rhodoferax ferrireducens DSM 15236

Gene: Rfer_0473: Ammonium transporter
 
Variovorax paradoxus S110

Gene: Vapar_0219: Ammonium transporter
 
Verminephrobacter eiseniae EF01-2

Gene: Veis_3313: Ammonium transporter
 
Methylibium petroleiphilum PM1

Gene: Mpe_A0172: Ammonium transporter
 2
Leptothrix cholodnii SP-6

Gene: Lcho_3941: Ammonium transporter

Gene: Lcho_0157: Ammonium transporter
Ammonium transporter
 
CRON 2.
glnA
*
Acidovorax avenae subsp. citrulli AAC00-1

Site:
position = -207
score = 5.56221
sequence = TGCACGATTTTGGTGCG

Site:
position = -184
score = 4.85358
sequence = GGCCCCGAATTGGTGCG

Gene: Aave_1442: Glutamine synthetase type I (EC 6.3.1.2)
*
Acidovorax sp. JS42

Site:
position = -134
score = 5.12206
sequence = TGCACGCGTTTGGTGCG

Site:
position = -206
score = 5.67622
sequence = TGCACCAAACGGGTGCA

Gene: Ajs_1189: Glutamine synthetase type I (EC 6.3.1.2)
*
Comamonas testosteroni KF-1

Site:
position = -238
score = 4.73691
sequence = TTCGCCAAGATGGTGCA

Site:
position = -261
score = 5.90661
sequence = TGCACCACATTGGTGCA

Gene: CtesDRAFT_0725: Glutamine synthetase type I (EC 6.3.1.2)
*
Delftia acidovorans SPH-1

Site:
position = -84
score = 4.73075
sequence = TGCACTCAATGGATGCA

Site:
position = -286
score = 5.7909
sequence = TGCACTCATTTGGTGCA

Site:
position = -214
score = 5.55922
sequence = TGCACCGATTTGGTGAA

Gene: Daci_5002: Glutamine synthetase type I (EC 6.3.1.2)
*
Polaromonas naphthalenivorans CJ2

Site:
position = -250
score = 4.57766
sequence = GGCCCTGAATTGGTGCG

Site:
position = -200
score = 4.99954
sequence = CGCACTTTTTTGGTGCT

Gene: Pnap_2780: Glutamine synthetase type I (EC 6.3.1.2)
*
Polaromonas sp. JS666

Site:
position = -216
score = 5.5788
sequence = TGCGCTAAATTGGTGCA

Site:
position = -242
score = 4.85358
sequence = GGCCCCGAATTGGTGCG

Gene: Bpro_1807: Glutamine synthetase type I (EC 6.3.1.2)
*
Rhodoferax ferrireducens DSM 15236

Site:
position = -184
score = 5.27545
sequence = CGCACTTAATTGGTGCT

Site:
position = -236
score = 4.74124
sequence = GGCCCTGAATTGGTGCA

Gene: Rfer_2979: Glutamine synthetase type I (EC 6.3.1.2)
*
Variovorax paradoxus S110

Site:
position = -139
score = 5.66305
sequence = TGCACCAATTTGGTGAT

Gene: Vapar_1632: Glutamine synthetase type I (EC 6.3.1.2)
*
Verminephrobacter eiseniae EF01-2

Site:
position = -219
score = 5.13864
sequence = TGCACGCATTTGGCGCA

Site:
position = -196
score = 4.85358
sequence = GGCCCCGAATTGGTGCG

Gene: Veis_3154: Glutamine synthetase type I (EC 6.3.1.2)
*
Methylibium petroleiphilum PM1

Site:
position = -244
score = 4.57766
sequence = GGCCCCGAAATGGTGCG

Gene: Mpe_A2076: Glutamine synthetase type I (EC 6.3.1.2)
*
Leptothrix cholodnii SP-6

Site:
position = -178
score = 5.06771
sequence = CGCACCATGTTTGTGCA

Site:
position = -225
score = 4.57766
sequence = GGCCCCGAAATGGTGCG

Gene: Lcho_3581: Glutamine synthetase type I (EC 6.3.1.2)
Glutamine synthetase type I (EC 6.3.1.2)
ntrZ
 
Acidovorax avenae subsp. citrulli AAC00-1

Gene: Aave_1443: Conserved hypothetical signal peptide protein
 
Acidovorax sp. JS42

Gene: Ajs_1190: Conserved hypothetical signal peptide protein
 
Comamonas testosteroni KF-1

Gene: CtesDRAFT_0726: Conserved hypothetical signal peptide protein
 
Delftia acidovorans SPH-1

Gene: Daci_5001: Conserved hypothetical signal peptide protein
 
Polaromonas naphthalenivorans CJ2

Gene: Pnap_2779: Conserved hypothetical signal peptide protein
 
Polaromonas sp. JS666

Gene: Bpro_1808: Conserved hypothetical signal peptide protein
 
Rhodoferax ferrireducens DSM 15236

Gene: Rfer_2980: Conserved hypothetical signal peptide protein
 
Variovorax paradoxus S110

Gene: Vapar_1633: Conserved hypothetical signal peptide protein
 
Verminephrobacter eiseniae EF01-2

Gene: Veis_3153: Conserved hypothetical signal peptide protein
 
Methylibium petroleiphilum PM1

Gene: Mpe_A2075: Conserved hypothetical signal peptide protein
 
Leptothrix cholodnii SP-6

Gene: Lcho_3582: Conserved hypothetical signal peptide protein
Conserved hypothetical signal peptide protein
ntrB
 
Acidovorax avenae subsp. citrulli AAC00-1

Gene: Aave_1444: putative nitrogen regulation protein NR(II)
 
Acidovorax sp. JS42

Gene: Ajs_1191: putative nitrogen regulation protein NR(II)
 
Comamonas testosteroni KF-1

Gene: CtesDRAFT_0727: putative nitrogen regulation protein NR(II)
 
Delftia acidovorans SPH-1

Gene: Daci_5000: putative nitrogen regulation protein NR(II)
 
Polaromonas naphthalenivorans CJ2

Gene: Pnap_2778: putative nitrogen regulation protein NR(II)
 
Polaromonas sp. JS666

Gene: Bpro_1809: putative nitrogen regulation protein NR(II)
 
Rhodoferax ferrireducens DSM 15236

Gene: Rfer_2981: putative nitrogen regulation protein NR(II)
 
Variovorax paradoxus S110

Gene: Vapar_1634: putative nitrogen regulation protein NR(II)
 
Verminephrobacter eiseniae EF01-2

Gene: Veis_3152: putative nitrogen regulation protein NR(II)
 
Methylibium petroleiphilum PM1

Gene: Mpe_A2074: putative nitrogen regulation protein NR(II)
 
Leptothrix cholodnii SP-6

Gene: Lcho_3583: putative nitrogen regulation protein NR(II)
putative nitrogen regulation protein NR(II)
ntrC
 
Acidovorax avenae subsp. citrulli AAC00-1

Gene: Aave_1445: Nitrogen regulation protein NR(I), Fis family
 
Acidovorax sp. JS42

Gene: Ajs_1192: Nitrogen regulation protein NR(I), Fis family
 
Comamonas testosteroni KF-1

Gene: CtesDRAFT_0728: Nitrogen regulation protein NR(I), Fis family
 
Delftia acidovorans SPH-1

Gene: Daci_4999: Nitrogen regulation protein NR(I), Fis family
 
Polaromonas naphthalenivorans CJ2

Gene: Pnap_2777: Nitrogen regulation protein NR(I), Fis family
 
Polaromonas sp. JS666

Gene: Bpro_1810: Nitrogen regulation protein NR(I), Fis family
 
Rhodoferax ferrireducens DSM 15236

Gene: Rfer_2982: Nitrogen regulation protein NR(I), Fis family
 
Variovorax paradoxus S110

Gene: Vapar_1635: Nitrogen regulation protein NR(I), Fis family
 
Verminephrobacter eiseniae EF01-2

Gene: Veis_3151: Nitrogen regulation protein NR(I), Fis family
 
Methylibium petroleiphilum PM1

Gene: Mpe_A2073: Nitrogen regulation protein NR(I), Fis family
 
Leptothrix cholodnii SP-6

Gene: Lcho_3584: Nitrogen regulation protein NR(I), Fis family
Nitrogen regulation protein NR(I), Fis family
 
CRON 3.
nrtA
*
Acidovorax avenae subsp. citrulli AAC00-1

Site:
position = -282
score = 4.83733
sequence = CGCACGAAGAGGGTGCA

Gene: Aave_2147: Nitrate ABC transporter, substrate-binding component
*
Acidovorax sp. JS42

Site:
position = -314
score = 5.03033
sequence = TGCACAAATGCGGTGCA

Gene: Ajs_2831: Nitrate ABC transporter, substrate-binding component
*
Comamonas testosteroni KF-1

Site:
position = -232
score = 4.53147
sequence = TGCACCAAATATGGGCC

Gene: CtesDRAFT_4523: Nitrate ABC transporter, substrate-binding component
*
Delftia acidovorans SPH-1

Site:
position = -277
score = 4.86857
sequence = AGCACCGACTTGGTGCC

Gene: Daci_2377: Nitrate ABC transporter, substrate-binding component
*
Polaromonas naphthalenivorans CJ2

Site:
position = -334
score = 4.74124
sequence = GGCGCCGAAATGGTGCA

Gene: Pnap_1414: Nitrate ABC transporter, substrate-binding component
 
Polaromonas sp. JS666

Gene: Bpro_3267: Nitrate ABC transporter, substrate-binding component
*
Rhodoferax ferrireducens DSM 15236

Site:
position = -315
score = 5.06905
sequence = TGCACAAAACTGGTGCC

Gene: Rfer_2554: Nitrate ABC transporter, substrate-binding component
*
Variovorax paradoxus S110

Site:
position = -313
score = 4.26536
sequence = CGCACAACAAGCGTGCA

Gene: Vapar_3522: Nitrate ABC transporter, substrate-binding component
 
Verminephrobacter eiseniae EF01-2

Gene: Veis_2590: Nitrate ABC transporter, substrate-binding component
 
Methylibium petroleiphilum PM1

Gene: Mpe_A1392: Nitrate ABC transporter, substrate-binding component
*
Leptothrix cholodnii SP-6

Site:
position = -300
score = 4.35164
sequence = TGCACGCCCATGGTGCG

Gene: Lcho_3843: Nitrate ABC transporter, substrate-binding component
Nitrate ABC transporter, substrate-binding component
nrtB
 
Acidovorax avenae subsp. citrulli AAC00-1

Gene: Aave_2146: Nitrate ABC transporter, permease component
 
Acidovorax sp. JS42

Gene: Ajs_2832: Nitrate ABC transporter, permease component
 
Comamonas testosteroni KF-1

Gene: CtesDRAFT_4524: Nitrate ABC transporter, permease component
 
Delftia acidovorans SPH-1

Gene: Daci_2376: Nitrate ABC transporter, permease component
 
Polaromonas naphthalenivorans CJ2

Gene: Pnap_1413: Nitrate ABC transporter, permease component
 
Polaromonas sp. JS666

Gene: Bpro_3268: Nitrate ABC transporter, permease component
 
Rhodoferax ferrireducens DSM 15236

Gene: Rfer_2555: Nitrate ABC transporter, permease component
 
Variovorax paradoxus S110

Gene: Vapar_3523: Nitrate ABC transporter, permease component
 
Verminephrobacter eiseniae EF01-2

Gene: Veis_2591: Nitrate ABC transporter, permease component
 
Methylibium petroleiphilum PM1

Gene: Mpe_A1391: Nitrate ABC transporter, permease component
 
Leptothrix cholodnii SP-6

Gene: Lcho_3842: Nitrate ABC transporter, permease component
Nitrate ABC transporter, permease component
nrtC
 
Acidovorax avenae subsp. citrulli AAC00-1

Gene: Aave_2145: Nitrate ABC transporter, ATP-binding component
 
Acidovorax sp. JS42

Gene: Ajs_2833: Nitrate ABC transporter, ATP-binding component
 
Comamonas testosteroni KF-1

Gene: CtesDRAFT_4525: Nitrate ABC transporter, ATP-binding component
 
Delftia acidovorans SPH-1

Gene: Daci_2375: Nitrate ABC transporter, ATP-binding component
 
Polaromonas naphthalenivorans CJ2

Gene: Pnap_1412: Nitrate ABC transporter, ATP-binding component
 
Polaromonas sp. JS666

Gene: Bpro_3269: Nitrate ABC transporter, ATP-binding component
 
Rhodoferax ferrireducens DSM 15236

Gene: Rfer_2556: Nitrate ABC transporter, ATP-binding component
 
Variovorax paradoxus S110

Gene: Vapar_3524: Nitrate ABC transporter, ATP-binding component
 
Verminephrobacter eiseniae EF01-2

Gene: Veis_2592: Nitrate ABC transporter, ATP-binding component
 
Methylibium petroleiphilum PM1

Gene: Mpe_A1390: Nitrate ABC transporter, ATP-binding component
 
Leptothrix cholodnii SP-6

Gene: Lcho_3841: Nitrate ABC transporter, ATP-binding component
Nitrate ABC transporter, ATP-binding component
nasD
*
Acidovorax avenae subsp. citrulli AAC00-1

Site:
position = -331
score = 4.39075
sequence = TGCACCGAAGCGGTTCA

Gene: Aave_2107: Nitrite reductase, large subunit (EC 1.7.1.4)
*
Acidovorax sp. JS42

Site:
position = -328
score = 4.46735
sequence = TGCACCACGGCGGTGCG

Gene: Ajs_2839: Nitrite reductase, large subunit (EC 1.7.1.4)
*
Comamonas testosteroni KF-1

Site:
position = -219
score = 4.75442
sequence = TGCACAAAAGCAGTGCA

Gene: CtesDRAFT_4526: Nitrite reductase, large subunit (EC 1.7.1.4)
*
Delftia acidovorans SPH-1

Site:
position = -252
score = 4.61777
sequence = CGCACCGCTTTGATGCA

Gene: Daci_2371: Nitrite reductase, large subunit (EC 1.7.1.4)
 
Polaromonas naphthalenivorans CJ2

Gene: Pnap_1407: Nitrite reductase, large subunit (EC 1.7.1.4)
 
Polaromonas sp. JS666

Gene: Bpro_3276: Nitrite reductase, large subunit (EC 1.7.1.4)
 
Rhodoferax ferrireducens DSM 15236

Gene: Rfer_2557: Nitrite reductase, large subunit (EC 1.7.1.4)
*2
Variovorax paradoxus S110

Site:
position = -189
score = 4.55706
sequence = AGCACTGTTTTGGTGAG

Gene: Vapar_2849: Nitrite reductase, large subunit (EC 1.7.1.4)

Gene: Vapar_3528: Nitrite reductase, large subunit (EC 1.7.1.4)
 
Verminephrobacter eiseniae EF01-2

Gene: Veis_2593: Nitrite reductase, large subunit (EC 1.7.1.4)
 
Methylibium petroleiphilum PM1

Gene: Mpe_A2317: Nitrite reductase, large subunit (EC 1.7.1.4)
 
Leptothrix cholodnii SP-6

Gene: Lcho_2678: Nitrite reductase, large subunit (EC 1.7.1.4)
Nitrite reductase, large subunit (EC 1.7.1.4)
nasE
 
Acidovorax avenae subsp. citrulli AAC00-1

Gene: Aave_2106: Nitrite reductase, small subunit (EC 1.7.1.4)
 
Acidovorax sp. JS42

Gene: Ajs_2840: Nitrite reductase, small subunit (EC 1.7.1.4)
 
Comamonas testosteroni KF-1

Gene: CtesDRAFT_4594: Nitrite reductase, small subunit (EC 1.7.1.4)
 
Delftia acidovorans SPH-1
 
Polaromonas naphthalenivorans CJ2

Gene: Pnap_1405: Nitrite reductase, small subunit (EC 1.7.1.4)
 
Polaromonas sp. JS666

Gene: Bpro_3278: Nitrite reductase, small subunit (EC 1.7.1.4)
 
Rhodoferax ferrireducens DSM 15236

Gene: Rfer_2558: Nitrite reductase, small subunit (EC 1.7.1.4)
 2
Variovorax paradoxus S110

Gene: Vapar_2848: Nitrite reductase, small subunit (EC 1.7.1.4)

Gene: Vapar_3529: Nitrite reductase, small subunit (EC 1.7.1.4)
 
Verminephrobacter eiseniae EF01-2

Gene: Veis_2594: Nitrite reductase, small subunit (EC 1.7.1.4)
 
Methylibium petroleiphilum PM1

Gene: Mpe_A2318: Nitrite reductase, small subunit (EC 1.7.1.4)
 
Leptothrix cholodnii SP-6

Gene: Lcho_2679: Nitrite reductase, small subunit (EC 1.7.1.4)
Nitrite reductase, small subunit (EC 1.7.1.4)
narK
 
Acidovorax avenae subsp. citrulli AAC00-1
 
Acidovorax sp. JS42
 
Comamonas testosteroni KF-1
 
Delftia acidovorans SPH-1
 
Polaromonas naphthalenivorans CJ2

Gene: Pnap_1411: Nitrate/nitrite antiporter
*
Polaromonas sp. JS666

Site:
position = -145
score = 4.79995
sequence = TGCACGCAATATGTGCA

Site:
position = -48
score = 4.78881
sequence = TGCACTAACTTTGTGAA

Gene: Bpro_3273: Nitrate/nitrite antiporter
 
Rhodoferax ferrireducens DSM 15236
*
Variovorax paradoxus S110

Site:
position = -166
score = 4.62319
sequence = AGCACCGCTTTGGTGAG

Gene: Vapar_3526: Nitrate/nitrite antiporter
 
Verminephrobacter eiseniae EF01-2
 
Methylibium petroleiphilum PM1

Gene: Mpe_A2315: Nitrate/nitrite antiporter
 
Leptothrix cholodnii SP-6

Gene: Lcho_2676: Nitrate/nitrite antiporter
Nitrate/nitrite antiporter
nasA
 
Acidovorax avenae subsp. citrulli AAC00-1

Gene: Aave_2105: Assimilatory nitrate reductase, large subunit (EC:1.7.99.4)
 
Acidovorax sp. JS42

Gene: Ajs_2841: Assimilatory nitrate reductase, large subunit (EC:1.7.99.4)
 
Comamonas testosteroni KF-1

Gene: CtesDRAFT_4527: Assimilatory nitrate reductase, large subunit (EC:1.7.99.4)
 
Delftia acidovorans SPH-1

Gene: Daci_2370: Assimilatory nitrate reductase, large subunit (EC:1.7.99.4)
 
Polaromonas naphthalenivorans CJ2

Gene: Pnap_1404: Assimilatory nitrate reductase, large subunit (EC:1.7.99.4)
 
Polaromonas sp. JS666

Gene: Bpro_3279: Assimilatory nitrate reductase, large subunit (EC:1.7.99.4)
 
Rhodoferax ferrireducens DSM 15236

Gene: Rfer_2559: Assimilatory nitrate reductase, large subunit (EC:1.7.99.4)
 
Variovorax paradoxus S110

Gene: Vapar_3530: Assimilatory nitrate reductase, large subunit (EC:1.7.99.4)
 
Verminephrobacter eiseniae EF01-2

Gene: Veis_2595: Assimilatory nitrate reductase, large subunit (EC:1.7.99.4)
 
Methylibium petroleiphilum PM1

Gene: Mpe_A2319: Assimilatory nitrate reductase, large subunit (EC:1.7.99.4)
 
Leptothrix cholodnii SP-6

Gene: Lcho_2680: Assimilatory nitrate reductase, large subunit (EC:1.7.99.4)
Assimilatory nitrate reductase, large subunit (EC:1.7.99.4)
cysG
 
Acidovorax avenae subsp. citrulli AAC00-1

Gene: Aave_2103: Uroporphyrinogen-III methyltransferase (EC 2.1.1.107)
 
Acidovorax sp. JS42

Gene: Ajs_2843: Uroporphyrinogen-III methyltransferase (EC 2.1.1.107)
 2
Comamonas testosteroni KF-1

Gene: CtesDRAFT_4528: Uroporphyrinogen-III methyltransferase (EC 2.1.1.107)

Gene: CtesDRAFT_0527: Uroporphyrinogen-III methyltransferase (EC 2.1.1.107)
 
Delftia acidovorans SPH-1

Gene: Daci_2368: Uroporphyrinogen-III methyltransferase (EC 2.1.1.107)
 
Polaromonas naphthalenivorans CJ2

Gene: Pnap_1402: Uroporphyrinogen-III methyltransferase (EC 2.1.1.107)
 
Polaromonas sp. JS666

Gene: Bpro_3281: Uroporphyrinogen-III methyltransferase (EC 2.1.1.107)
 
Rhodoferax ferrireducens DSM 15236

Gene: Rfer_2883: Uroporphyrinogen-III methyltransferase (EC 2.1.1.107)
 2
Variovorax paradoxus S110

Gene: Vapar_2847: Uroporphyrinogen-III methyltransferase (EC 2.1.1.107)

Gene: Vapar_3532: Uroporphyrinogen-III methyltransferase (EC 2.1.1.107)
 
Verminephrobacter eiseniae EF01-2

Gene: Veis_2292: Uroporphyrinogen-III methyltransferase (EC 2.1.1.107)
 
Methylibium petroleiphilum PM1

Gene: Mpe_A2321: Uroporphyrinogen-III methyltransferase (EC 2.1.1.107)
 
Leptothrix cholodnii SP-6
Uroporphyrinogen-III methyltransferase (EC 2.1.1.107)
ybiB
 
Acidovorax avenae subsp. citrulli AAC00-1

Gene: Aave_2104: Conserved hypothetical protein
*
Acidovorax sp. JS42

Site:
position = -120
score = 4.58336
sequence = GGCACCACTGCGGTGCA

Gene: Ajs_2842: Conserved hypothetical protein
 
Comamonas testosteroni KF-1

Gene: CtesDRAFT_0528: Conserved hypothetical protein
 
Delftia acidovorans SPH-1

Gene: Daci_2369: Conserved hypothetical protein
 
Polaromonas naphthalenivorans CJ2

Gene: Pnap_1403: Conserved hypothetical protein
 
Polaromonas sp. JS666

Gene: Bpro_3280: Conserved hypothetical protein
 
Rhodoferax ferrireducens DSM 15236

Gene: Rfer_2882: Conserved hypothetical protein
 
Variovorax paradoxus S110

Gene: Vapar_3531: Conserved hypothetical protein
 
Verminephrobacter eiseniae EF01-2

Gene: Veis_2293: Conserved hypothetical protein
 
Methylibium petroleiphilum PM1

Gene: Mpe_A2320: Conserved hypothetical protein
 
Leptothrix cholodnii SP-6

Gene: Lcho_2690: Conserved hypothetical protein
Conserved hypothetical protein
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD