Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog NagQ - Rhodospirillales

Properties
Regulator type: Transcription factor
Regulator family: GntR/Others
Regulation mode: repressor
Biological process: N-acetylglucosamine utilization
Effector: N-acetylglucosamine
Phylum: Proteobacteria/alpha
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 6 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Rhodospirillum rubrum ATCC 11170
Magnetospirillum magnetotacticum MS-1
Magnetospirillum magneticum AMB-1
Azospirillum sp. B510 6 4
Rhodospirillum centenum SW
Gluconacetobacter diazotrophicus PAl 5
Acetobacter pasteurianus IFO 3283-01
Gluconobacter oxydans 621H
Granulibacter bethesdensis CGDNIH1
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
nagQ
 
Rhodospirillum rubrum ATCC 11170
 
Magnetospirillum magnetotacticum MS-1
 
Magnetospirillum magneticum AMB-1
*
Azospirillum sp. B510

Site:
position = -50
score = 6.60304
sequence = AGGCCTT-(4)-TGGTATC

Gene: AZL_b05040: Transcriptional regulator of N-Acetylglucosamine utilization, GntR family
 
Rhodospirillum centenum SW
 
Gluconacetobacter diazotrophicus PAl 5
 
Acetobacter pasteurianus IFO 3283-01
 
Gluconobacter oxydans 621H
 
Granulibacter bethesdensis CGDNIH1
Transcriptional regulator of N-Acetylglucosamine utilization, GntR family
 
CRON 2.
murQ
 
Rhodospirillum rubrum ATCC 11170
 
Magnetospirillum magnetotacticum MS-1

Gene: Magn03006323: N-acetylmuramic acid 6-phosphate etherase (EC 4.2.-.-)
 
Magnetospirillum magneticum AMB-1
*
Azospirillum sp. B510

Site:
position = -56
score = -1.11243
sequence = CAGTCCA-(4)-AATACCA

Site:
position = -169
score = -0.978188
sequence = GATACCA-(4)-AAGGCCT

Gene: AZL_b05050: N-acetylmuramic acid 6-phosphate etherase (EC 4.2.-.-)
 
Rhodospirillum centenum SW
 
Gluconacetobacter diazotrophicus PAl 5

Gene: Gdia_3142: N-acetylmuramic acid 6-phosphate etherase (EC 4.2.-.-)
 
Acetobacter pasteurianus IFO 3283-01

Gene: APA01_04290: N-acetylmuramic acid 6-phosphate etherase (EC 4.2.-.-)
 
Gluconobacter oxydans 621H

Gene: GOX0877: N-acetylmuramic acid 6-phosphate etherase (EC 4.2.-.-)
 
Granulibacter bethesdensis CGDNIH1
N-acetylmuramic acid 6-phosphate etherase (EC 4.2.-.-)
nagE
 
Rhodospirillum rubrum ATCC 11170
 
Magnetospirillum magnetotacticum MS-1
 
Magnetospirillum magneticum AMB-1
 
Azospirillum sp. B510

Gene: AZL_b05060: PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69)
 
Rhodospirillum centenum SW
 
Gluconacetobacter diazotrophicus PAl 5
 
Acetobacter pasteurianus IFO 3283-01
 
Gluconobacter oxydans 621H
 
Granulibacter bethesdensis CGDNIH1
PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69)
 
CRON 3.
wecA
 
Rhodospirillum rubrum ATCC 11170

Gene: Rru_A3657: Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase (EC 2.7.8.-)
 
Magnetospirillum magnetotacticum MS-1

Gene: Magn03010496: Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase (EC 2.7.8.-)
 
Magnetospirillum magneticum AMB-1

Gene: amb0039: Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase (EC 2.7.8.-)
*
Azospirillum sp. B510

Site:
position = -91
score = 6.943
sequence = TGGTATC-(3)-AGGTTTT

Gene: AZL_022170: Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase (EC 2.7.8.-)
 
Rhodospirillum centenum SW

Gene: RC1_1716: Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase (EC 2.7.8.-)
 
Gluconacetobacter diazotrophicus PAl 5

Gene: Gdia_0249: Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase (EC 2.7.8.-)
 
Acetobacter pasteurianus IFO 3283-01

Gene: APA01_01010: Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase (EC 2.7.8.-)
 
Gluconobacter oxydans 621H

Gene: GOX1920: Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase (EC 2.7.8.-)
 
Granulibacter bethesdensis CGDNIH1

Gene: GbCGDNIH1_0162: Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase (EC 2.7.8.-)
Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase (EC 2.7.8.-)
 
CRON 4.
nagB2
 
Rhodospirillum rubrum ATCC 11170
 
Magnetospirillum magnetotacticum MS-1
 
Magnetospirillum magneticum AMB-1
*
Azospirillum sp. B510

Site:
position = -44
score = 6.9962
sequence = AGGTCTT-(4)-TGGTATC

Site:
position = -165
score = 6.72486
sequence = TGGTATT-(4)-TGGTTCC

Gene: AZL_b05010: Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6)
 
Rhodospirillum centenum SW
 
Gluconacetobacter diazotrophicus PAl 5
 
Acetobacter pasteurianus IFO 3283-01
 
Gluconobacter oxydans 621H
 
Granulibacter bethesdensis CGDNIH1
Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6)
nagA
 
Rhodospirillum rubrum ATCC 11170
 
Magnetospirillum magnetotacticum MS-1
 
Magnetospirillum magneticum AMB-1
 
Azospirillum sp. B510

Gene: AZL_b05020: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25)
 
Rhodospirillum centenum SW

Gene: RC1_1413: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25)
 
Gluconacetobacter diazotrophicus PAl 5
 
Acetobacter pasteurianus IFO 3283-01
 
Gluconobacter oxydans 621H
 
Granulibacter bethesdensis CGDNIH1
N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25)
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD