Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog NagQ - Oceanospirillales/Alteromonadales

Properties
Regulator type: Transcription factor
Regulator family: GntR/Others
Regulation mode: repressor
Biological process: N-acetylglucosamine utilization
Effector: N-acetylglucosamine
Phylum: Proteobacteria/gamma
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 11 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Hahella chejuensis KCTC 2396 8 2
Marinobacter aqueolei
Marinobacter sp. ELB17
Oceanobacter sp. RED65
Oceanospirillum sp. MED92
Marinomonas sp. MWYL1 8 2
Saccharophagus degradans 2-40
Teredinibacter turnerae T7901
Cellvibrio japonicus Ueda107
Chromohalobacter salexigens DSM 3043
Reinekea sp. MED297 9 5
Alcanivorax borkumensis SK2
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
MED297_20052
 
Hahella chejuensis KCTC 2396
 
Marinobacter aqueolei
 
Marinobacter sp. ELB17
 
Oceanobacter sp. RED65
 
Oceanospirillum sp. MED92
 
Marinomonas sp. MWYL1
 
Saccharophagus degradans 2-40
 
Teredinibacter turnerae T7901
 
Cellvibrio japonicus Ueda107
 
Chromohalobacter salexigens DSM 3043
*
Reinekea sp. MED297

Site:
position = -78
score = 4.92668
sequence = TGGTTTTGTGGTGGTATC

Gene: MED297_20052: Predicted N-acetylglucosamine transporter
 
Alcanivorax borkumensis SK2
Predicted N-acetylglucosamine transporter
 
CRON 2.
CJA_3023
 
Hahella chejuensis KCTC 2396
 
Marinobacter aqueolei
 
Marinobacter sp. ELB17
 
Oceanobacter sp. RED65
 
Oceanospirillum sp. MED92
 
Marinomonas sp. MWYL1
 
Saccharophagus degradans 2-40
 
Teredinibacter turnerae T7901
 
Cellvibrio japonicus Ueda107

Gene: CJA_3023: Hypothetical protein
 
Chromohalobacter salexigens DSM 3043
*
Reinekea sp. MED297

Site:
position = -44
score = 5.91114
sequence = AGGTATTATATTGGTATT

Gene: MED297_05914: Hypothetical protein
 
Alcanivorax borkumensis SK2
Hypothetical protein
 
CRON 3.
nagT
*
Hahella chejuensis KCTC 2396

Site:
position = -233
score = -0.237566
sequence = AATACCTTTTTAATACCA

Gene: HCH_06982: N-Acetyl-D-glucosamine ABC transport system, sugar-binding protein
 
Marinobacter aqueolei
 
Marinobacter sp. ELB17
 
Oceanobacter sp. RED65
 
Oceanospirillum sp. MED92
*
Marinomonas sp. MWYL1

Site:
position = -86
score = -0.889976
sequence = AATACCTAAAAAATACCA

Site:
position = -192
score = -0.451649
sequence = AAAACCAATATAGAACCA

Gene: Mmwyl1_1651: N-Acetyl-D-glucosamine ABC transport system, sugar-binding protein
 
Saccharophagus degradans 2-40
 
Teredinibacter turnerae T7901
 
Cellvibrio japonicus Ueda107
 
Chromohalobacter salexigens DSM 3043
 
Reinekea sp. MED297
 
Alcanivorax borkumensis SK2
N-Acetyl-D-glucosamine ABC transport system, sugar-binding protein
nagU
 
Hahella chejuensis KCTC 2396

Gene: HCH_06981: N-Acetyl-D-glucosamine ABC transport system, permease protein 1
 
Marinobacter aqueolei
 
Marinobacter sp. ELB17
 
Oceanobacter sp. RED65
 
Oceanospirillum sp. MED92
 
Marinomonas sp. MWYL1

Gene: Mmwyl1_1650: N-Acetyl-D-glucosamine ABC transport system, permease protein 1
 
Saccharophagus degradans 2-40
 
Teredinibacter turnerae T7901
 
Cellvibrio japonicus Ueda107
 
Chromohalobacter salexigens DSM 3043
 
Reinekea sp. MED297
 
Alcanivorax borkumensis SK2
N-Acetyl-D-glucosamine ABC transport system, permease protein 1
nagV
 
Hahella chejuensis KCTC 2396

Gene: HCH_06980: N-Acetyl-D-glucosamine ABC transport system, permease protein 2
 
Marinobacter aqueolei
 
Marinobacter sp. ELB17
 
Oceanobacter sp. RED65
 
Oceanospirillum sp. MED92
 
Marinomonas sp. MWYL1

Gene: Mmwyl1_1649: N-Acetyl-D-glucosamine ABC transport system, permease protein 2
 
Saccharophagus degradans 2-40
 
Teredinibacter turnerae T7901
 
Cellvibrio japonicus Ueda107
 
Chromohalobacter salexigens DSM 3043
 
Reinekea sp. MED297
 
Alcanivorax borkumensis SK2
N-Acetyl-D-glucosamine ABC transport system, permease protein 2
nagW
 
Hahella chejuensis KCTC 2396

Gene: HCH_06979: N-Acetyl-D-glucosamine ABC transport system, ATP-binding component
 
Marinobacter aqueolei
 
Marinobacter sp. ELB17
 
Oceanobacter sp. RED65
 
Oceanospirillum sp. MED92
 
Marinomonas sp. MWYL1

Gene: Mmwyl1_1648: N-Acetyl-D-glucosamine ABC transport system, ATP-binding component
 
Saccharophagus degradans 2-40
 
Teredinibacter turnerae T7901
 
Cellvibrio japonicus Ueda107
 
Chromohalobacter salexigens DSM 3043
 
Reinekea sp. MED297
 
Alcanivorax borkumensis SK2
N-Acetyl-D-glucosamine ABC transport system, ATP-binding component
nagQ
 
Hahella chejuensis KCTC 2396

Gene: HCH_06978: Transcriptional regulator of N-Acetylglucosamine utilization, GntR family
 
Marinobacter aqueolei
 
Marinobacter sp. ELB17
 
Oceanobacter sp. RED65
 
Oceanospirillum sp. MED92
 
Marinomonas sp. MWYL1

Gene: Mmwyl1_1647: Transcriptional regulator of N-Acetylglucosamine utilization, GntR family
 
Saccharophagus degradans 2-40
 
Teredinibacter turnerae T7901
 
Cellvibrio japonicus Ueda107
 
Chromohalobacter salexigens DSM 3043
 
Reinekea sp. MED297

Gene: MED297_03120: Transcriptional regulator of N-Acetylglucosamine utilization, GntR family
 
Alcanivorax borkumensis SK2
Transcriptional regulator of N-Acetylglucosamine utilization, GntR family
nagK
 
Hahella chejuensis KCTC 2396

Gene: HCH_06985: N-acetylglucosamine kinase of eukaryotic type (EC 2.7.1.59)
 
Marinobacter aqueolei
 
Marinobacter sp. ELB17
 
Oceanobacter sp. RED65
 
Oceanospirillum sp. MED92
 
Marinomonas sp. MWYL1

Gene: Mmwyl1_1653: N-acetylglucosamine kinase of eukaryotic type (EC 2.7.1.59)
 
Saccharophagus degradans 2-40
 
Teredinibacter turnerae T7901
 
Cellvibrio japonicus Ueda107
 
Chromohalobacter salexigens DSM 3043
*
Reinekea sp. MED297

Site:
position = -73
score = 6.08695
sequence = TGGTATTAAATTGGTATT

Gene: MED297_03115: N-acetylglucosamine kinase of eukaryotic type (EC 2.7.1.59)
 
Alcanivorax borkumensis SK2
N-acetylglucosamine kinase of eukaryotic type (EC 2.7.1.59)
nagA
 
Hahella chejuensis KCTC 2396

Gene: HCH_06986: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25)
 
Marinobacter aqueolei
 
Marinobacter sp. ELB17
 
Oceanobacter sp. RED65
 
Oceanospirillum sp. MED92
 
Marinomonas sp. MWYL1

Gene: Mmwyl1_1654: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25)
 
Saccharophagus degradans 2-40
 
Teredinibacter turnerae T7901
 
Cellvibrio japonicus Ueda107
 
Chromohalobacter salexigens DSM 3043
 2
Reinekea sp. MED297

Gene: MED297_03130: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25)

Gene: MED297_03125: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25)
 
Alcanivorax borkumensis SK2
N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25)
nagB
*
Hahella chejuensis KCTC 2396

Site:
position = -77
score = 5.58712
sequence = TGGTATTAAAAAGGTATT

Gene: HCH_06984: Glucosamine-6-phosphate deaminase (EC 3.5.99.6)
 
Marinobacter aqueolei
 
Marinobacter sp. ELB17
 
Oceanobacter sp. RED65
 
Oceanospirillum sp. MED92
*
Marinomonas sp. MWYL1

Site:
position = -49
score = 4.91939
sequence = TGGTTCTATATTGGTTTT

Site:
position = -155
score = 6.23953
sequence = TGGTATTTTTTAGGTATT

Gene: Mmwyl1_1652: Glucosamine-6-phosphate deaminase (EC 3.5.99.6)
 
Saccharophagus degradans 2-40
 
Teredinibacter turnerae T7901
 
Cellvibrio japonicus Ueda107
 
Chromohalobacter salexigens DSM 3043
 
Reinekea sp. MED297

Gene: MED297_03135: Glucosamine-6-phosphate deaminase (EC 3.5.99.6)
 
Alcanivorax borkumensis SK2
Glucosamine-6-phosphate deaminase (EC 3.5.99.6)
 
CRON 4.
cdxA
 
Hahella chejuensis KCTC 2396

Gene: HCH_01137: Chitodextrinase precursor (EC 3.2.1.14)
 
Marinobacter aqueolei
 
Marinobacter sp. ELB17
 
Oceanobacter sp. RED65
 
Oceanospirillum sp. MED92
 
Marinomonas sp. MWYL1
 
Saccharophagus degradans 2-40
 
Teredinibacter turnerae T7901
 
Cellvibrio japonicus Ueda107
 
Chromohalobacter salexigens DSM 3043
*
Reinekea sp. MED297

Site:
position = -51
score = 5.77401
sequence = AGGTATTTAATTGGTATT

Gene: MED297_11870: Chitodextrinase precursor (EC 3.2.1.14)
 
Alcanivorax borkumensis SK2
Chitodextrinase precursor (EC 3.2.1.14)
 
CRON 5.
chiA
 
Hahella chejuensis KCTC 2396
 
Marinobacter aqueolei
 
Marinobacter sp. ELB17
 
Oceanobacter sp. RED65
 
Oceanospirillum sp. MED92
 
Marinomonas sp. MWYL1
 
Saccharophagus degradans 2-40

Gene: Sde_3605: Chitinase (EC 3.2.1.14)
 
Teredinibacter turnerae T7901

Gene: TERTU_0285: Chitinase (EC 3.2.1.14)
 
Cellvibrio japonicus Ueda107

Gene: CJA_2611: Chitinase (EC 3.2.1.14)
 
Chromohalobacter salexigens DSM 3043
*
Reinekea sp. MED297

Site:
position = -144
score = -2.12483
sequence = AATGCCAAAGAGATACCA

Gene: MED297_00800: Chitinase (EC 3.2.1.14)
 
Alcanivorax borkumensis SK2
Chitinase (EC 3.2.1.14)
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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