Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog NagQ - Ralstonia

Properties
Regulator type: Transcription factor
Regulator family: GntR/Others
Regulation mode: repressor
Biological process: N-acetylglucosamine utilization
Effector: N-acetylglucosamine
Phylum: Proteobacteria/beta
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 2 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Ralstonia solanacearum GMI1000
Ralstonia pickettii 12J
Ralstonia metallidurans CH34
Ralstonia eutropha JMP134
Ralstonia eutropha H16 6 2
Cupriavidus taiwanensis
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
ptsI
 
Ralstonia solanacearum GMI1000
 
Ralstonia pickettii 12J
 
Ralstonia metallidurans CH34
 
Ralstonia eutropha JMP134
*
Ralstonia eutropha H16

Site:
position = -101
score = 7.69014
sequence = TGGTTTT-(3)-TGGTATT

Gene: H16_A0311: PTS system, glucose-specific IIA component (EC 2.7.1.69) / Phosphocarrier protein of PTS system / Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9)
 
Cupriavidus taiwanensis
PTS system, glucose-specific IIA component (EC 2.7.1.69) / Phosphocarrier protein of PTS system / Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9)
nagE
 
Ralstonia solanacearum GMI1000
 
Ralstonia pickettii 12J
 
Ralstonia metallidurans CH34
 
Ralstonia eutropha JMP134
 
Ralstonia eutropha H16

Gene: H16_A0312: PTS system, N-acetylglucosamine-specific IIA component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69)
 
Cupriavidus taiwanensis
PTS system, N-acetylglucosamine-specific IIA component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69)
omp1
 
Ralstonia solanacearum GMI1000

Gene: RS02744: Outer membrane protein (porin)
 
Ralstonia pickettii 12J
 
Ralstonia metallidurans CH34
 
Ralstonia eutropha JMP134

Gene: Reut_A1174: Outer membrane protein (porin)
 
Ralstonia eutropha H16

Gene: H16_A0313: Outer membrane protein (porin)
 
Cupriavidus taiwanensis
Outer membrane protein (porin)
nagA
 
Ralstonia solanacearum GMI1000
 
Ralstonia pickettii 12J
 
Ralstonia metallidurans CH34
 
Ralstonia eutropha JMP134
 
Ralstonia eutropha H16

Gene: H16_A0314: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25)
 
Cupriavidus taiwanensis
N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25)
nagB2
 
Ralstonia solanacearum GMI1000
 
Ralstonia pickettii 12J
 
Ralstonia metallidurans CH34
 
Ralstonia eutropha JMP134
 
Ralstonia eutropha H16

Gene: H16_A0315: Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6)
 
Cupriavidus taiwanensis
Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6)
 
CRON 2.
nagQ
 
Ralstonia solanacearum GMI1000
 
Ralstonia pickettii 12J
 
Ralstonia metallidurans CH34
 
Ralstonia eutropha JMP134
*
Ralstonia eutropha H16

Site:
position = -308
score = -2.50211
sequence = AATACCA-(3)-AAAACCA

Gene: H16_A0310: Transcriptional regulator of N-Acetylglucosamine utilization, GntR family
 
Cupriavidus taiwanensis

Gene: RALTA_A0253: Transcriptional regulator of N-Acetylglucosamine utilization, GntR family
Transcriptional regulator of N-Acetylglucosamine utilization, GntR family
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD