Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog IscR - Rhodobacterales

Properties
Regulator type: Transcription factor
Regulator family: Rrf2
Regulation mode: repressor (activator)
Biological process: Iron-sulfur cluster biogenesis; Iron homeostasis
Effector: Iron-sulfur cluster redox state; Iron ion, (Fe2+)
Phylum: Proteobacteria/Alpha
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 125 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Rhodobacter sphaeroides 2.4.1 27 8
Paracoccus denitrificans PD1222 12 6
Jannaschia sp. CCS1 32 10
Rhodobacterales bacterium HTCC2654 11 6
Oceanicola granulosus HTCC2516 2 2
Loktanella vestfoldensis SKA53 24 9
Oceanicola batsensis HTCC2597 29 9
Roseovarius nubinhibens ISM 19 9
Roseovarius sp. 217 25 8
Sulfitobacter sp. EE-36 35 12
Silicibacter TM1040 26 7
Silicibacter pomeroyi DSS-3 10 5
Roseobacter sp. MED193 39 8
Hyphomonas neptunium ATCC 15444
Oceanicaulis alexandrii HTCC2633 1 1
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
fbpA
*
Rhodobacter sphaeroides 2.4.1

Site:
position = -20
score = 3.65642
sequence = CCTGACAAAAGAGGTCACA

Site:
position = -80
score = 4.50487
sequence = GTTGACTGATAGACTCAGC

Gene: RSP_2913: Ferric iron ABC transporter, iron-binding protein
 
Paracoccus denitrificans PD1222

Gene: Pden_4447: Ferric iron ABC transporter, iron-binding protein
*
Jannaschia sp. CCS1

Site:
position = -37
score = 5.29582
sequence = CCTGACTGTTTTAGTCGGA

Site:
position = -94
score = 3.67154
sequence = TCAAAGTGTTTTTGTCGGA

Gene: Jann_0118: Ferric iron ABC transporter, iron-binding protein
*
Rhodobacterales bacterium HTCC2654

Site:
position = -52
score = 5.20592
sequence = CCTGACGAATTTAGTCAGA

Gene: RB2654_04329: Ferric iron ABC transporter, iron-binding protein
*
Oceanicola granulosus HTCC2516

Site:
position = -58
score = 4.89124
sequence = CCCGACCAAAATAGTCAGC

Gene: OG2516_03503: Ferric iron ABC transporter, iron-binding protein
*
Loktanella vestfoldensis SKA53

Site:
position = -53
score = 4.12865
sequence = CCCAAGTAAAAGAGTCGGG

Site:
position = -78
score = 4.84203
sequence = CCCGACTAAAATATTCAGG

Gene: SKA53_05313: Ferric iron ABC transporter, iron-binding protein
*
Oceanicola batsensis HTCC2597

Site:
position = -60
score = 4.85084
sequence = CCTGACCAAAATACTCGGA

Gene: OB2597_04193: Ferric iron ABC transporter, iron-binding protein
*
Roseovarius nubinhibens ISM

Site:
position = -104
score = 5.17402
sequence = TCCGAGTATTTTAGTCGGA

Site:
position = -138
score = 5.36404
sequence = CTTGACTAAATTAGTCGGA

Gene: ISM_05125: Ferric iron ABC transporter, iron-binding protein
*
Roseovarius sp. 217

Site:
position = -38
score = 3.76266
sequence = CCCCATCAAATCACTCGGA

Site:
position = -70
score = 4.79254
sequence = ATTGACTCTTTTAGTCAGA

Gene: ROS217_23057: Ferric iron ABC transporter, iron-binding protein
*
Sulfitobacter sp. EE-36

Site:
position = -91
score = 4.36032
sequence = TCCTATTAATTCACTCAAG

Site:
position = -42
score = 3.69389
sequence = TCTTACTGTTTTTATAGGT

Gene: EE36_05613: Ferric iron ABC transporter, iron-binding protein
*
Silicibacter TM1040

Site:
position = -126
score = 4.95634
sequence = TCTGACTGAATTTATCGGA

Gene: TM1040_0124: Ferric iron ABC transporter, iron-binding protein
*
Silicibacter pomeroyi DSS-3

Site:
position = -50
score = 4.73337
sequence = CCCGACTGAAATAATCAGT

Gene: SPO3287: Ferric iron ABC transporter, iron-binding protein
*
Roseobacter sp. MED193

Site:
position = -65
score = 4.17206
sequence = ACTGACAAAAGAAGTCGGA

Gene: MED193_12793: Ferric iron ABC transporter, iron-binding protein
 
Hyphomonas neptunium ATCC 15444

Gene: HNE_2693: Ferric iron ABC transporter, iron-binding protein
 
Oceanicaulis alexandrii HTCC2633

Gene: OA2633_15080: Ferric iron ABC transporter, iron-binding protein
Ferric iron ABC transporter, iron-binding protein
fbpC
 
Rhodobacter sphaeroides 2.4.1

Gene: RSP_2539: Ferric iron ABC transporter, ATP-binding protein
 
Paracoccus denitrificans PD1222

Gene: Pden_4448: Ferric iron ABC transporter, ATP-binding protein
*
Jannaschia sp. CCS1

Site:
position = -27
score = 3.98924
sequence = CCCGATTGAAAAGATCGGA

Gene: Jann_1208: Ferric iron ABC transporter, ATP-binding protein
 
Rhodobacterales bacterium HTCC2654

Gene: RB2654_01465: Ferric iron ABC transporter, ATP-binding protein
*
Oceanicola granulosus HTCC2516

Site:
position = -44
score = 3.61516
sequence = CCCGAGCGAAATGTTCGGG

Gene: OG2516_02803: Ferric iron ABC transporter, ATP-binding protein
*
Loktanella vestfoldensis SKA53

Site:
position = -29
score = 3.62934
sequence = CCCAATTGTTTTGATCAGG

Gene: SKA53_06010: Ferric iron ABC transporter, ATP-binding protein
*
Oceanicola batsensis HTCC2597

Site:
position = -26
score = 4.09375
sequence = CCTTAGTAAATCCATCGGA

Gene: OB2597_00425: Ferric iron ABC transporter, ATP-binding protein
*
Roseovarius nubinhibens ISM

Site:
position = -46
score = 4.45928
sequence = CCCGAGTGAATTGATCGGA

Gene: ISM_15910: Ferric iron ABC transporter, ATP-binding protein
*
Roseovarius sp. 217

Site:
position = -36
score = 4.14715
sequence = CCCGATAGATTTGATCGGA

Gene: ROS217_20592: Ferric iron ABC transporter, ATP-binding protein
*
Sulfitobacter sp. EE-36

Site:
position = -32
score = 4.05527
sequence = CCCGAGCGAATTGATCGGA

Gene: EE36_16412: Ferric iron ABC transporter, ATP-binding protein
 
Silicibacter TM1040

Gene: TM1040_1801: Ferric iron ABC transporter, ATP-binding protein
 
Silicibacter pomeroyi DSS-3

Gene: SPO2689: Ferric iron ABC transporter, ATP-binding protein
 
Roseobacter sp. MED193

Gene: MED193_06889: Ferric iron ABC transporter, ATP-binding protein
 
Hyphomonas neptunium ATCC 15444

Gene: HNE_2695: Ferric iron ABC transporter, ATP-binding protein
 
Oceanicaulis alexandrii HTCC2633

Gene: OA2633_15070: Ferric iron ABC transporter, ATP-binding protein
Ferric iron ABC transporter, ATP-binding protein
fbpB
 
Rhodobacter sphaeroides 2.4.1

Gene: RSP_0163: Ferric iron ABC transporter, permease protein
 
Paracoccus denitrificans PD1222
*
Jannaschia sp. CCS1

Site:
position = -21
score = 3.77224
sequence = CCCGACAAAAACACCAAGA

Gene: Jann_0134: Ferric iron ABC transporter, permease protein
 
Rhodobacterales bacterium HTCC2654

Gene: RB2654_07676: Ferric iron ABC transporter, permease protein
 
Oceanicola granulosus HTCC2516

Gene: OG2516_00394: Ferric iron ABC transporter, permease protein
*
Loktanella vestfoldensis SKA53

Site:
position = -72
score = 4.64986
sequence = TCCGATCAAATAAGTCAGA

Gene: SKA53_02241: Ferric iron ABC transporter, permease protein
 
Oceanicola batsensis HTCC2597

Gene: OB2597_05735: Ferric iron ABC transporter, permease protein
 
Roseovarius nubinhibens ISM

Gene: ISM_01315: Ferric iron ABC transporter, permease protein
 
Roseovarius sp. 217

Gene: ROS217_23925: Ferric iron ABC transporter, permease protein
*
Sulfitobacter sp. EE-36

Site:
position = -28
score = 5.14849
sequence = TCCGACTGAATTAGTCGAA

Gene: EE36_05618: Ferric iron ABC transporter, permease protein
*
Silicibacter TM1040

Site:
position = -50
score = 3.66747
sequence = TCCGACAAAAATGCTTGAA

Gene: TM1040_0122: Ferric iron ABC transporter, permease protein
*
Silicibacter pomeroyi DSS-3

Site:
position = -27
score = 4.14944
sequence = TCCGACTAAACTGGTCGAT

Gene: SPO3288: Ferric iron ABC transporter, permease protein
*
Roseobacter sp. MED193

Site:
position = -58
score = 3.78678
sequence = TCCGACCAAAATGATCGCA

Gene: MED193_12813: Ferric iron ABC transporter, permease protein
 
Hyphomonas neptunium ATCC 15444

Gene: HNE_2694: Ferric iron ABC transporter, permease protein
 
Oceanicaulis alexandrii HTCC2633

Gene: OA2633_15075: Ferric iron ABC transporter, permease protein
Ferric iron ABC transporter, permease protein
 
CRON 2.
EE36_10454
 
Rhodobacter sphaeroides 2.4.1
 
Paracoccus denitrificans PD1222
 
Jannaschia sp. CCS1
 
Rhodobacterales bacterium HTCC2654
 
Oceanicola granulosus HTCC2516
 
Loktanella vestfoldensis SKA53
 
Oceanicola batsensis HTCC2597
 
Roseovarius nubinhibens ISM
 
Roseovarius sp. 217
*
Sulfitobacter sp. EE-36

Site:
position = -82
score = 4.32482
sequence = CTTGATTGTTTTTATCAGC

Gene: EE36_10454: Ferrichrome-iron receptor
 
Silicibacter TM1040
 
Silicibacter pomeroyi DSS-3
 
Roseobacter sp. MED193
 
Hyphomonas neptunium ATCC 15444
 
Oceanicaulis alexandrii HTCC2633
Ferrichrome-iron receptor
 
CRON 3.
fhuA2
 
Rhodobacter sphaeroides 2.4.1
 
Paracoccus denitrificans PD1222
 
Jannaschia sp. CCS1
 
Rhodobacterales bacterium HTCC2654
 
Oceanicola granulosus HTCC2516
 
Loktanella vestfoldensis SKA53
 
Oceanicola batsensis HTCC2597
 
Roseovarius nubinhibens ISM
 
Roseovarius sp. 217
*
Sulfitobacter sp. EE-36

Site:
position = -30
score = 4.87163
sequence = TCCGACTAAAACAGTAAGG

Site:
position = -251
score = 3.83844
sequence = TCTTACTTTATTTATAGGG

Site:
position = -72
score = 3.72257
sequence = CCTTACTATTTCAGTTTGA

Gene: EE36_01780: Ferrichrome-iron receptor
 
Silicibacter TM1040
 
Silicibacter pomeroyi DSS-3
 
Roseobacter sp. MED193
 
Hyphomonas neptunium ATCC 15444
 
Oceanicaulis alexandrii HTCC2633
Ferrichrome-iron receptor
EE36_01775
 
Rhodobacter sphaeroides 2.4.1
 
Paracoccus denitrificans PD1222
 
Jannaschia sp. CCS1
 
Rhodobacterales bacterium HTCC2654
 
Oceanicola granulosus HTCC2516
 
Loktanella vestfoldensis SKA53
 
Oceanicola batsensis HTCC2597
 
Roseovarius nubinhibens ISM
 
Roseovarius sp. 217
 
Sulfitobacter sp. EE-36

Gene: EE36_01775: AmpG permease
 
Silicibacter TM1040
 
Silicibacter pomeroyi DSS-3
 
Roseobacter sp. MED193
 
Hyphomonas neptunium ATCC 15444
 
Oceanicaulis alexandrii HTCC2633
AmpG permease
mxcB2
 
Rhodobacter sphaeroides 2.4.1
 
Paracoccus denitrificans PD1222
 
Jannaschia sp. CCS1
 
Rhodobacterales bacterium HTCC2654
 
Oceanicola granulosus HTCC2516
 
Loktanella vestfoldensis SKA53
 
Oceanicola batsensis HTCC2597
 
Roseovarius nubinhibens ISM
 
Roseovarius sp. 217
 
Sulfitobacter sp. EE-36

Gene: EE36_01770: Siderophore-interacting protein
 
Silicibacter TM1040
 
Silicibacter pomeroyi DSS-3
 
Roseobacter sp. MED193
 
Hyphomonas neptunium ATCC 15444
 
Oceanicaulis alexandrii HTCC2633
Siderophore-interacting protein
 
CRON 4.
ISM_05670
 
Rhodobacter sphaeroides 2.4.1

Gene: RSP_3056: Outer membrane receptor proteins, mostly Fe transport
 
Paracoccus denitrificans PD1222

Gene: Pden_0296: Outer membrane receptor proteins, mostly Fe transport
 
Jannaschia sp. CCS1
 
Rhodobacterales bacterium HTCC2654
 
Oceanicola granulosus HTCC2516
 
Loktanella vestfoldensis SKA53
*
Oceanicola batsensis HTCC2597

Site:
position = -166
score = 4.70235
sequence = TCCGACTGATATAGTCACC

Gene: OB2597_08064: Outer membrane receptor proteins, mostly Fe transport
*
Roseovarius nubinhibens ISM

Site:
position = -100
score = 4.14527
sequence = CTTGACTTTTTGCCTCAGG

Gene: ISM_05670: Outer membrane receptor proteins, mostly Fe transport
 
Roseovarius sp. 217
 
Sulfitobacter sp. EE-36
 
Silicibacter TM1040
 
Silicibacter pomeroyi DSS-3
 
Roseobacter sp. MED193

Gene: MED193_08043: Outer membrane receptor proteins, mostly Fe transport
 
Hyphomonas neptunium ATCC 15444
 
Oceanicaulis alexandrii HTCC2633
Outer membrane receptor proteins, mostly Fe transport
 
CRON 5.
OB2597_05460
 
Rhodobacter sphaeroides 2.4.1
 
Paracoccus denitrificans PD1222
 
Jannaschia sp. CCS1
 
Rhodobacterales bacterium HTCC2654
 
Oceanicola granulosus HTCC2516
 
Loktanella vestfoldensis SKA53
*
Oceanicola batsensis HTCC2597

Site:
position = -101
score = 4.16777
sequence = TCTGACGGTTTTTATCAAC

Gene: OB2597_05460: TonB-dependent hemin, ferrichrome receptor
*
Roseovarius nubinhibens ISM

Site:
position = -117
score = 4.86648
sequence = CCTGAGTAAAAGACTCAGG

Gene: ISM_00940: TonB-dependent hemin, ferrichrome receptor
 
Roseovarius sp. 217
 
Sulfitobacter sp. EE-36
 
Silicibacter TM1040
 
Silicibacter pomeroyi DSS-3
 
Roseobacter sp. MED193

Gene: MED193_08013: TonB-dependent hemin, ferrichrome receptor
 
Hyphomonas neptunium ATCC 15444
 
Oceanicaulis alexandrii HTCC2633
TonB-dependent hemin, ferrichrome receptor
 
CRON 6.
araX
 
Rhodobacter sphaeroides 2.4.1
*
Paracoccus denitrificans PD1222

Site:
position = -81
score = 3.82017
sequence = CCAGAGTTTTTCAATCAAC

Gene: Pden_1138: Iron-regulated transcriptional regulator, AraC family
 
Jannaschia sp. CCS1
 
Rhodobacterales bacterium HTCC2654
 
Oceanicola granulosus HTCC2516
 
Loktanella vestfoldensis SKA53
 
Oceanicola batsensis HTCC2597
 
Roseovarius nubinhibens ISM
*
Roseovarius sp. 217

Site:
position = -165
score = 4.13969
sequence = CCTGATGTAATTTGTCAAC

Gene: ROS217_22877: Iron-regulated transcriptional regulator, AraC family
*
Sulfitobacter sp. EE-36

Site:
position = -113
score = 5.18449
sequence = TCCGAGTAAATTTGTCAGA

Gene: EE36_08018: Iron-regulated transcriptional regulator, AraC family
 
Silicibacter TM1040
 
Silicibacter pomeroyi DSS-3
 
Roseobacter sp. MED193
 
Hyphomonas neptunium ATCC 15444
 
Oceanicaulis alexandrii HTCC2633
Iron-regulated transcriptional regulator, AraC family
 
CRON 7.
irpA
 
Rhodobacter sphaeroides 2.4.1

Gene: RSP_1548: Iron-regulated protein A precursor
 
Paracoccus denitrificans PD1222
*
Jannaschia sp. CCS1

Site:
position = -253
score = 4.74869
sequence = TCTGACAAAACAAGTCAGG

Gene: Jann_1368: Iron-regulated protein A precursor
*
Rhodobacterales bacterium HTCC2654

Site:
position = -25
score = 3.92748
sequence = CCCGATCACTTTACTCGGG

Gene: RB2654_13154: Iron-regulated protein A precursor
 
Oceanicola granulosus HTCC2516
 
Loktanella vestfoldensis SKA53
 
Oceanicola batsensis HTCC2597
*
Roseovarius nubinhibens ISM

Site:
position = -82
score = 4.91682
sequence = CCCGAGTATTTCACTCAGG

Gene: ISM_04365: Iron-regulated protein A precursor
*
Roseovarius sp. 217

Site:
position = -147
score = 4.56215
sequence = GCCTACTAAATCAGTCAAC

Gene: ROS217_10107: Iron-regulated protein A precursor
*
Sulfitobacter sp. EE-36

Site:
position = -140
score = 4.78764
sequence = TCTTACTAAAATTGTCGGG

Gene: EE36_02713: Iron-regulated protein A precursor
 
Silicibacter TM1040

Gene: TM1040_2199: Iron-regulated protein A precursor
*
Silicibacter pomeroyi DSS-3

Site:
position = -88
score = 5.17529
sequence = ACTGACAAATTTAGTCAGA

Gene: SPO0086: Iron-regulated protein A precursor
 
Roseobacter sp. MED193

Gene: MED193_19664: Iron-regulated protein A precursor
 
Hyphomonas neptunium ATCC 15444
 
Oceanicaulis alexandrii HTCC2633
Iron-regulated protein A precursor
hmuX
 
Rhodobacter sphaeroides 2.4.1
 
Paracoccus denitrificans PD1222
 
Jannaschia sp. CCS1
 
Rhodobacterales bacterium HTCC2654
 
Oceanicola granulosus HTCC2516
 
Loktanella vestfoldensis SKA53
 
Oceanicola batsensis HTCC2597
 
Roseovarius nubinhibens ISM
 
Roseovarius sp. 217

Gene: ROS217_10102: hypothetical porin
 
Sulfitobacter sp. EE-36

Gene: EE36_02708: hypothetical porin
 
Silicibacter TM1040
 
Silicibacter pomeroyi DSS-3

Gene: SPO0087: hypothetical porin
 
Roseobacter sp. MED193

Gene: MED193_19659: hypothetical porin
 
Hyphomonas neptunium ATCC 15444
 
Oceanicaulis alexandrii HTCC2633
hypothetical porin
COG3488
*
Rhodobacter sphaeroides 2.4.1

Site:
position = -56
score = 4.44905
sequence = TCCGATTGAAAGACTCGGG

Gene: RSP_1545: Probable thiol oxidoreductase with 2 cytochrome c heme-binding sites
 
Paracoccus denitrificans PD1222
 
Jannaschia sp. CCS1

Gene: Jann_1369: Probable thiol oxidoreductase with 2 cytochrome c heme-binding sites
 
Rhodobacterales bacterium HTCC2654

Gene: RB2654_13134: Probable thiol oxidoreductase with 2 cytochrome c heme-binding sites
 
Oceanicola granulosus HTCC2516
 
Loktanella vestfoldensis SKA53
 
Oceanicola batsensis HTCC2597
 
Roseovarius nubinhibens ISM

Gene: ISM_04360: Probable thiol oxidoreductase with 2 cytochrome c heme-binding sites
 
Roseovarius sp. 217

Gene: ROS217_10097: Probable thiol oxidoreductase with 2 cytochrome c heme-binding sites
 
Sulfitobacter sp. EE-36

Gene: EE36_02703: Probable thiol oxidoreductase with 2 cytochrome c heme-binding sites
 
Silicibacter TM1040

Gene: TM1040_2202: Probable thiol oxidoreductase with 2 cytochrome c heme-binding sites
 
Silicibacter pomeroyi DSS-3

Gene: SPO0088: Probable thiol oxidoreductase with 2 cytochrome c heme-binding sites
 
Roseobacter sp. MED193

Gene: MED193_19644: Probable thiol oxidoreductase with 2 cytochrome c heme-binding sites
 
Hyphomonas neptunium ATCC 15444
 
Oceanicaulis alexandrii HTCC2633
Probable thiol oxidoreductase with 2 cytochrome c heme-binding sites
COG3489
 
Rhodobacter sphaeroides 2.4.1

Gene: RSP_1544: Predicted periplasmic lipoprotein
 
Paracoccus denitrificans PD1222
 
Jannaschia sp. CCS1

Gene: Jann_1370: Predicted periplasmic lipoprotein
 
Rhodobacterales bacterium HTCC2654

Gene: RB2654_13129: Predicted periplasmic lipoprotein
 
Oceanicola granulosus HTCC2516
 
Loktanella vestfoldensis SKA53
 
Oceanicola batsensis HTCC2597
 
Roseovarius nubinhibens ISM

Gene: ISM_04355: Predicted periplasmic lipoprotein
 
Roseovarius sp. 217

Gene: ROS217_10092: Predicted periplasmic lipoprotein
 
Sulfitobacter sp. EE-36

Gene: EE36_02698: Predicted periplasmic lipoprotein
 
Silicibacter TM1040

Gene: TM1040_2203: Predicted periplasmic lipoprotein
 
Silicibacter pomeroyi DSS-3

Gene: SPO0089: Predicted periplasmic lipoprotein
 
Roseobacter sp. MED193

Gene: MED193_19639: Predicted periplasmic lipoprotein
 
Hyphomonas neptunium ATCC 15444
 
Oceanicaulis alexandrii HTCC2633
Predicted periplasmic lipoprotein
COG3490
 
Rhodobacter sphaeroides 2.4.1

Gene: RSP_1543: Uncharacterised conserved protein UCP028101
 
Paracoccus denitrificans PD1222
 
Jannaschia sp. CCS1

Gene: Jann_1371: Uncharacterised conserved protein UCP028101
 
Rhodobacterales bacterium HTCC2654

Gene: RB2654_13124: Uncharacterised conserved protein UCP028101
 
Oceanicola granulosus HTCC2516
 
Loktanella vestfoldensis SKA53
 
Oceanicola batsensis HTCC2597
 
Roseovarius nubinhibens ISM

Gene: ISM_04350: Uncharacterised conserved protein UCP028101
 
Roseovarius sp. 217

Gene: ROS217_10087: Uncharacterised conserved protein UCP028101
 
Sulfitobacter sp. EE-36

Gene: EE36_02693: Uncharacterised conserved protein UCP028101
 
Silicibacter TM1040

Gene: TM1040_2204: Uncharacterised conserved protein UCP028101
 
Silicibacter pomeroyi DSS-3

Gene: SPO0090: Uncharacterised conserved protein UCP028101
 
Roseobacter sp. MED193

Gene: MED193_19634: Uncharacterised conserved protein UCP028101
 
Hyphomonas neptunium ATCC 15444
 
Oceanicaulis alexandrii HTCC2633
Uncharacterised conserved protein UCP028101
bfd
 
Rhodobacter sphaeroides 2.4.1

Gene: RSP_1547: Bacterioferritin-associated ferredoxin
 
Paracoccus denitrificans PD1222

Gene: Pden_0615: Bacterioferritin-associated ferredoxin
 
Jannaschia sp. CCS1
 
Rhodobacterales bacterium HTCC2654

Gene: RB2654_13144: Bacterioferritin-associated ferredoxin
 
Oceanicola granulosus HTCC2516
 
Loktanella vestfoldensis SKA53
 
Oceanicola batsensis HTCC2597

Gene: OB2597_06820: Bacterioferritin-associated ferredoxin
 
Roseovarius nubinhibens ISM

Gene: ISM_00995: Bacterioferritin-associated ferredoxin
 
Roseovarius sp. 217
 
Sulfitobacter sp. EE-36
*
Silicibacter TM1040

Site:
position = -103
score = 4.09226
sequence = CCTGATCAAAACAGTCCGA

Site:
position = -71
score = 4.16035
sequence = GCTTATTCTTTTACTCGGA

Gene: TM1040_2200: Bacterioferritin-associated ferredoxin
 
Silicibacter pomeroyi DSS-3
*
Roseobacter sp. MED193

Site:
position = -103
score = 4.35696
sequence = CCTGACAAAAACAATAAGC

Site:
position = -72
score = 4.49226
sequence = CCTTATTGTTTTTGTCAGA

Gene: MED193_19654: Bacterioferritin-associated ferredoxin
 
Hyphomonas neptunium ATCC 15444
 
Oceanicaulis alexandrii HTCC2633
Bacterioferritin-associated ferredoxin
bfr
 
Rhodobacter sphaeroides 2.4.1

Gene: RSP_1546: Bacterioferritin (cytochrome b1)
 
Paracoccus denitrificans PD1222

Gene: Pden_0616: Bacterioferritin (cytochrome b1)
 
Jannaschia sp. CCS1
 
Rhodobacterales bacterium HTCC2654

Gene: RB2654_13139: Bacterioferritin (cytochrome b1)
 
Oceanicola granulosus HTCC2516
 
Loktanella vestfoldensis SKA53
 
Oceanicola batsensis HTCC2597

Gene: OB2597_06815: Bacterioferritin (cytochrome b1)
 
Roseovarius nubinhibens ISM

Gene: ISM_00990: Bacterioferritin (cytochrome b1)
 
Roseovarius sp. 217
 
Sulfitobacter sp. EE-36
 
Silicibacter TM1040

Gene: TM1040_2201: Bacterioferritin (cytochrome b1)
 
Silicibacter pomeroyi DSS-3
 
Roseobacter sp. MED193

Gene: MED193_19649: Bacterioferritin (cytochrome b1)
 
Hyphomonas neptunium ATCC 15444
 
Oceanicaulis alexandrii HTCC2633
Bacterioferritin (cytochrome b1)
MED193_19679
 
Rhodobacter sphaeroides 2.4.1
 
Paracoccus denitrificans PD1222
 
Jannaschia sp. CCS1
 
Rhodobacterales bacterium HTCC2654
 
Oceanicola granulosus HTCC2516
 
Loktanella vestfoldensis SKA53
 
Oceanicola batsensis HTCC2597
 
Roseovarius nubinhibens ISM
 
Roseovarius sp. 217
 
Sulfitobacter sp. EE-36
 
Silicibacter TM1040
 
Silicibacter pomeroyi DSS-3
*
Roseobacter sp. MED193

Site:
position = -118
score = 5.34791
sequence = TCTGACAAAAATAGTCAGA

Site:
position = -91
score = 4.6512
sequence = CTTGATTGTTTTAATCAGG

Gene: MED193_19679: hypothetical protein
 
Hyphomonas neptunium ATCC 15444
 
Oceanicaulis alexandrii HTCC2633
hypothetical protein
hemP
*
Rhodobacter sphaeroides 2.4.1

Site:
position = -228
score = 3.92817
sequence = ACCGACCGAAAGAATCAGC

Site:
position = -200
score = 4.68835
sequence = TCCGACTGATTCAGTCACC

Gene: RSP_6006: Hemin uptake protein HemP
*
Paracoccus denitrificans PD1222

Site:
position = -53
score = 4.27888
sequence = TCCTAGGAAATTTGTCAGG

Gene: Pden_4141: Hemin uptake protein HemP
*
Jannaschia sp. CCS1

Site:
position = -259
score = 4.41861
sequence = GCATACTATTTTAGTCAGG

Site:
position = -287
score = 5.18761
sequence = TCTGAGTAAAATACTCAGG

Gene: Jann_3275: Hemin uptake protein HemP
 
Rhodobacterales bacterium HTCC2654

Gene: RB2654_08842: Hemin uptake protein HemP
 
Oceanicola granulosus HTCC2516
*2
Loktanella vestfoldensis SKA53

Site:
position = -43
score = 5.07979
sequence = CCTGACTAAAAAACTCAGG

Gene: SKA53_14131: Hemin uptake protein HemP

Site:
position = -47
score = 4.80878
sequence = GCTGACAGAAATAATCAGA

Gene: SKA53_06267: Hemin uptake protein HemP
 
Oceanicola batsensis HTCC2597
*
Roseovarius nubinhibens ISM

Site:
position = -205
score = 5.20227
sequence = TCTGACTAAAAAAGTCGGA

Site:
position = -178
score = 4.8089
sequence = TCTGACAGAATAAATCAGA

Gene: ISM_01000: Hemin uptake protein HemP
*
Roseovarius sp. 217

Site:
position = -152
score = 4.2224
sequence = TCTGATCAAAAGAATCGGA

Site:
position = -124
score = 4.7105
sequence = CCTTATTAATTAAGTCAGA

Gene: ROS217_23865: Hemin uptake protein HemP
*
Sulfitobacter sp. EE-36

Site:
position = -274
score = 4.99629
sequence = TCCGACTAAAACTGTCGGA

Site:
position = -247
score = 4.08707
sequence = CCCTATAATTTCAATCAGG

Gene: EE36_10464: Hemin uptake protein HemP
*
Silicibacter TM1040

Site:
position = -258
score = 4.73069
sequence = TCTGACCAAATAAATCAGG

Gene: TM1040_2198: Hemin uptake protein HemP
*
Silicibacter pomeroyi DSS-3

Site:
position = -99
score = 4.59075
sequence = GGCGACAAAAATAGTCAGG

Gene: SPO0789: Hemin uptake protein HemP
 
Roseobacter sp. MED193

Gene: MED193_19674: Hemin uptake protein HemP
 
Hyphomonas neptunium ATCC 15444
 
Oceanicaulis alexandrii HTCC2633
Hemin uptake protein HemP
MED193_19669
 
Rhodobacter sphaeroides 2.4.1
 
Paracoccus denitrificans PD1222
 
Jannaschia sp. CCS1
 
Rhodobacterales bacterium HTCC2654
 
Oceanicola granulosus HTCC2516
 
Loktanella vestfoldensis SKA53
 
Oceanicola batsensis HTCC2597
 
Roseovarius nubinhibens ISM
 
Roseovarius sp. 217
 
Sulfitobacter sp. EE-36
 
Silicibacter TM1040
 
Silicibacter pomeroyi DSS-3
 
Roseobacter sp. MED193

Gene: MED193_19669: hypothetical protein
 
Hyphomonas neptunium ATCC 15444
 
Oceanicaulis alexandrii HTCC2633
hypothetical protein
RB2654_08837
 
Rhodobacter sphaeroides 2.4.1
 
Paracoccus denitrificans PD1222
 
Jannaschia sp. CCS1
 
Rhodobacterales bacterium HTCC2654

Gene: RB2654_08837: hypothetical protein
 
Oceanicola granulosus HTCC2516
 
Loktanella vestfoldensis SKA53

Gene: SKA53_14126: hypothetical protein
*
Oceanicola batsensis HTCC2597

Site:
position = -125
score = 4.07191
sequence = GTTGATCGAAAAAGTCGGA

Site:
position = -97
score = 4.3382
sequence = GGTGAGCAAAATAGTCAGG

Gene: OB2597_06825: hypothetical protein
 
Roseovarius nubinhibens ISM
 
Roseovarius sp. 217

Gene: ROS217_23860: hypothetical protein
 
Sulfitobacter sp. EE-36

Gene: EE36_10459: hypothetical protein
 
Silicibacter TM1040
 
Silicibacter pomeroyi DSS-3

Gene: SPO0790: hypothetical protein
 
Roseobacter sp. MED193
 
Hyphomonas neptunium ATCC 15444
 
Oceanicaulis alexandrii HTCC2633
hypothetical protein
RB2654_08847
 
Rhodobacter sphaeroides 2.4.1
 
Paracoccus denitrificans PD1222
 
Jannaschia sp. CCS1
*
Rhodobacterales bacterium HTCC2654

Site:
position = -91
score = 5.22546
sequence = TCCGACTGAATTTGTCAGA

Gene: RB2654_08847: hypothetical protein
 
Oceanicola granulosus HTCC2516
 
Loktanella vestfoldensis SKA53
 
Oceanicola batsensis HTCC2597
 
Roseovarius nubinhibens ISM
 
Roseovarius sp. 217
 
Sulfitobacter sp. EE-36
 
Silicibacter TM1040
 
Silicibacter pomeroyi DSS-3
 
Roseobacter sp. MED193
 
Hyphomonas neptunium ATCC 15444
 
Oceanicaulis alexandrii HTCC2633
hypothetical protein
 
CRON 8.
fhuA
 
Rhodobacter sphaeroides 2.4.1

Gene: RSP_1440: Ferric hydroxamate outer membrane receptor FhuA
*
Paracoccus denitrificans PD1222

Site:
position = 24
score = 4.28409
sequence = CCTGAGTTAATAGCTCGGA

Gene: Pden_1139: Ferric hydroxamate outer membrane receptor FhuA
 
Jannaschia sp. CCS1
 
Rhodobacterales bacterium HTCC2654
 
Oceanicola granulosus HTCC2516
 
Loktanella vestfoldensis SKA53
 
Oceanicola batsensis HTCC2597
 
Roseovarius nubinhibens ISM
*
Roseovarius sp. 217

Site:
position = -30
score = 4.70545
sequence = CCTGAGTTAAAGAGTCGGA

Gene: ROS217_22882: Ferric hydroxamate outer membrane receptor FhuA
*
Sulfitobacter sp. EE-36

Site:
position = -44
score = 4.55755
sequence = ACTGAGTTAAATACTCGGA

Gene: EE36_08023: Ferric hydroxamate outer membrane receptor FhuA
 
Silicibacter TM1040
 
Silicibacter pomeroyi DSS-3
 
Roseobacter sp. MED193
 
Hyphomonas neptunium ATCC 15444
 
Oceanicaulis alexandrii HTCC2633
Ferric hydroxamate outer membrane receptor FhuA
fhuD
 
Rhodobacter sphaeroides 2.4.1

Gene: RSP_1439: Ferric hydroxamate ABC transporter (TC 3.A.1.14.3), periplasmic substrate binding protein FhuD
 
Paracoccus denitrificans PD1222

Gene: Pden_1140: Ferric hydroxamate ABC transporter (TC 3.A.1.14.3), periplasmic substrate binding protein FhuD
 
Jannaschia sp. CCS1
 
Rhodobacterales bacterium HTCC2654
 
Oceanicola granulosus HTCC2516
 
Loktanella vestfoldensis SKA53
 
Oceanicola batsensis HTCC2597
 
Roseovarius nubinhibens ISM
 
Roseovarius sp. 217

Gene: ROS217_22887: Ferric hydroxamate ABC transporter (TC 3.A.1.14.3), periplasmic substrate binding protein FhuD
 
Sulfitobacter sp. EE-36

Gene: EE36_08028: Ferric hydroxamate ABC transporter (TC 3.A.1.14.3), periplasmic substrate binding protein FhuD
 
Silicibacter TM1040
 
Silicibacter pomeroyi DSS-3
 
Roseobacter sp. MED193
 
Hyphomonas neptunium ATCC 15444
 
Oceanicaulis alexandrii HTCC2633
Ferric hydroxamate ABC transporter (TC 3.A.1.14.3), periplasmic substrate binding protein FhuD
fhuB
 
Rhodobacter sphaeroides 2.4.1

Gene: RSP_1438: Ferric hydroxamate ABC transporter (TC 3.A.1.14.3), permease component FhuB
 
Paracoccus denitrificans PD1222

Gene: Pden_1141: Ferric hydroxamate ABC transporter (TC 3.A.1.14.3), permease component FhuB
 
Jannaschia sp. CCS1
 
Rhodobacterales bacterium HTCC2654
 
Oceanicola granulosus HTCC2516
 
Loktanella vestfoldensis SKA53
 
Oceanicola batsensis HTCC2597
 
Roseovarius nubinhibens ISM
 
Roseovarius sp. 217

Gene: ROS217_22892: Ferric hydroxamate ABC transporter (TC 3.A.1.14.3), permease component FhuB
 
Sulfitobacter sp. EE-36

Gene: EE36_08033: Ferric hydroxamate ABC transporter (TC 3.A.1.14.3), permease component FhuB
 
Silicibacter TM1040
 
Silicibacter pomeroyi DSS-3
 
Roseobacter sp. MED193
 
Hyphomonas neptunium ATCC 15444
 
Oceanicaulis alexandrii HTCC2633
Ferric hydroxamate ABC transporter (TC 3.A.1.14.3), permease component FhuB
fhuC
 
Rhodobacter sphaeroides 2.4.1

Gene: RSP_1437: Ferric hydroxamate ABC transporter (TC 3.A.1.14.3), ATP-binding protein FhuC
 
Paracoccus denitrificans PD1222

Gene: Pden_1142: Ferric hydroxamate ABC transporter (TC 3.A.1.14.3), ATP-binding protein FhuC
 
Jannaschia sp. CCS1
 
Rhodobacterales bacterium HTCC2654
 
Oceanicola granulosus HTCC2516
 
Loktanella vestfoldensis SKA53
 
Oceanicola batsensis HTCC2597
 
Roseovarius nubinhibens ISM
 
Roseovarius sp. 217

Gene: ROS217_22897: Ferric hydroxamate ABC transporter (TC 3.A.1.14.3), ATP-binding protein FhuC
 
Sulfitobacter sp. EE-36

Gene: EE36_08038: Ferric hydroxamate ABC transporter (TC 3.A.1.14.3), ATP-binding protein FhuC
 
Silicibacter TM1040
 
Silicibacter pomeroyi DSS-3
 
Roseobacter sp. MED193
 
Hyphomonas neptunium ATCC 15444
 
Oceanicaulis alexandrii HTCC2633
Ferric hydroxamate ABC transporter (TC 3.A.1.14.3), ATP-binding protein FhuC
 
CRON 9.
hmuR
 
Rhodobacter sphaeroides 2.4.1
*
Paracoccus denitrificans PD1222

Site:
position = -89
score = 4.13275
sequence = ATTGACAGTTTTACTAAGA

Gene: Pden_4201: TonB-dependent hemin , ferrichrome receptor
*
Jannaschia sp. CCS1

Site:
position = -144
score = 4.38834
sequence = GTTGACGCTTTTAGTCGGA

Gene: Jann_2132: TonB-dependent hemin , ferrichrome receptor
*
Rhodobacterales bacterium HTCC2654

Site:
position = -112
score = 4.62963
sequence = GTTGACTAAATTACTAAGC

Gene: RB2654_15781: TonB-dependent hemin , ferrichrome receptor
 
Oceanicola granulosus HTCC2516
*
Loktanella vestfoldensis SKA53

Site:
position = -113
score = 4.59639
sequence = CTTGACTGTTTGTGTCGGA

Gene: SKA53_06417: TonB-dependent hemin , ferrichrome receptor
 
Oceanicola batsensis HTCC2597
*
Roseovarius nubinhibens ISM

Site:
position = -157
score = 4.43746
sequence = CTTGACAGTTTTAGTCTGA

Gene: ISM_04235: TonB-dependent hemin , ferrichrome receptor
*
Roseovarius sp. 217

Site:
position = -198
score = 4.35697
sequence = CTTGACTCTTTTACTCATA

Gene: ROS217_17442: TonB-dependent hemin , ferrichrome receptor
*
Sulfitobacter sp. EE-36

Site:
position = -256
score = 4.33009
sequence = GTTGACACTTTTAGTCGGT

Gene: EE36_01535: TonB-dependent hemin , ferrichrome receptor
*
Silicibacter TM1040

Site:
position = -143
score = 3.9452
sequence = CTTGACAGATTTAATAAAT

Gene: TM1040_0347: TonB-dependent hemin , ferrichrome receptor
 
Silicibacter pomeroyi DSS-3
*
Roseobacter sp. MED193

Site:
position = 69
score = 4.00046
sequence = GTTGACTGTTTTTATCACC

Gene: MED193_17504: TonB-dependent hemin , ferrichrome receptor
 
Hyphomonas neptunium ATCC 15444
 
Oceanicaulis alexandrii HTCC2633
TonB-dependent hemin , ferrichrome receptor
Mlr1156
 
Rhodobacter sphaeroides 2.4.1
 
Paracoccus denitrificans PD1222
 
Jannaschia sp. CCS1

Gene: Jann_2131: Mlr1156 protein
 
Rhodobacterales bacterium HTCC2654
 
Oceanicola granulosus HTCC2516
 
Loktanella vestfoldensis SKA53

Gene: SKA53_06412: Mlr1156 protein
 
Oceanicola batsensis HTCC2597

Gene: OB2597_05430: Mlr1156 protein
*
Roseovarius nubinhibens ISM

Site:
position = -132
score = 4.03831
sequence = TCCGACTATTTCATTTAGG

Gene: ISM_04265: Mlr1156 protein
 
Roseovarius sp. 217

Gene: ROS217_22867: Mlr1156 protein
*
Sulfitobacter sp. EE-36

Site:
position = -167
score = 4.43603
sequence = GTTGATTGTTAAAGTCAGG

Gene: EE36_12993: Mlr1156 protein
 
Silicibacter TM1040

Gene: TM1040_0348: Mlr1156 protein
 
Silicibacter pomeroyi DSS-3
 
Roseobacter sp. MED193

Gene: MED193_17509: Mlr1156 protein
 
Hyphomonas neptunium ATCC 15444
 
Oceanicaulis alexandrii HTCC2633
Mlr1156 protein
exbB
 
Rhodobacter sphaeroides 2.4.1
 
Paracoccus denitrificans PD1222
 
Jannaschia sp. CCS1

Gene: Jann_2130: Ferric siderophore transport system, biopolymer transport protein ExbB
 
Rhodobacterales bacterium HTCC2654
 
Oceanicola granulosus HTCC2516
 
Loktanella vestfoldensis SKA53

Gene: SKA53_06407: Ferric siderophore transport system, biopolymer transport protein ExbB
 
Oceanicola batsensis HTCC2597

Gene: OB2597_05435: Ferric siderophore transport system, biopolymer transport protein ExbB
 
Roseovarius nubinhibens ISM

Gene: ISM_04260: Ferric siderophore transport system, biopolymer transport protein ExbB
 
Roseovarius sp. 217

Gene: ROS217_22862: Ferric siderophore transport system, biopolymer transport protein ExbB
 
Sulfitobacter sp. EE-36

Gene: EE36_12998: Ferric siderophore transport system, biopolymer transport protein ExbB
 
Silicibacter TM1040

Gene: TM1040_0349: Ferric siderophore transport system, biopolymer transport protein ExbB
 
Silicibacter pomeroyi DSS-3
 
Roseobacter sp. MED193

Gene: MED193_17514: Ferric siderophore transport system, biopolymer transport protein ExbB
 
Hyphomonas neptunium ATCC 15444
 
Oceanicaulis alexandrii HTCC2633
Ferric siderophore transport system, biopolymer transport protein ExbB
exbD1
 
Rhodobacter sphaeroides 2.4.1
 
Paracoccus denitrificans PD1222
 
Jannaschia sp. CCS1

Gene: Jann_2129: Ferric siderophore transport system, periplasmic binding protein ExbD
 
Rhodobacterales bacterium HTCC2654
 
Oceanicola granulosus HTCC2516
 
Loktanella vestfoldensis SKA53

Gene: SKA53_06402: Ferric siderophore transport system, periplasmic binding protein ExbD
 
Oceanicola batsensis HTCC2597

Gene: OB2597_05440: Ferric siderophore transport system, periplasmic binding protein ExbD
 
Roseovarius nubinhibens ISM

Gene: ISM_04255: Ferric siderophore transport system, periplasmic binding protein ExbD
 
Roseovarius sp. 217

Gene: ROS217_22857: Ferric siderophore transport system, periplasmic binding protein ExbD
 
Sulfitobacter sp. EE-36

Gene: EE36_13003: Ferric siderophore transport system, periplasmic binding protein ExbD
 
Silicibacter TM1040

Gene: TM1040_0350: Ferric siderophore transport system, periplasmic binding protein ExbD
 
Silicibacter pomeroyi DSS-3
 
Roseobacter sp. MED193

Gene: MED193_17519: Ferric siderophore transport system, periplasmic binding protein ExbD
 
Hyphomonas neptunium ATCC 15444
 
Oceanicaulis alexandrii HTCC2633
Ferric siderophore transport system, periplasmic binding protein ExbD
exbD2
 
Rhodobacter sphaeroides 2.4.1
 
Paracoccus denitrificans PD1222
 
Jannaschia sp. CCS1

Gene: Jann_2128: Ferric siderophore transport system, periplasmic binding protein ExbD
 
Rhodobacterales bacterium HTCC2654
 
Oceanicola granulosus HTCC2516
 
Loktanella vestfoldensis SKA53

Gene: SKA53_06397: Ferric siderophore transport system, periplasmic binding protein ExbD
 
Oceanicola batsensis HTCC2597

Gene: OB2597_05445: Ferric siderophore transport system, periplasmic binding protein ExbD
 
Roseovarius nubinhibens ISM

Gene: ISM_04250: Ferric siderophore transport system, periplasmic binding protein ExbD
 
Roseovarius sp. 217

Gene: ROS217_22852: Ferric siderophore transport system, periplasmic binding protein ExbD
 
Sulfitobacter sp. EE-36

Gene: EE36_13008: Ferric siderophore transport system, periplasmic binding protein ExbD
 
Silicibacter TM1040

Gene: TM1040_0351: Ferric siderophore transport system, periplasmic binding protein ExbD
 
Silicibacter pomeroyi DSS-3
 
Roseobacter sp. MED193

Gene: MED193_17524: Ferric siderophore transport system, periplasmic binding protein ExbD
 
Hyphomonas neptunium ATCC 15444
 
Oceanicaulis alexandrii HTCC2633
Ferric siderophore transport system, periplasmic binding protein ExbD
tonB
 
Rhodobacter sphaeroides 2.4.1
 
Paracoccus denitrificans PD1222
 
Jannaschia sp. CCS1

Gene: Jann_2127: Ferric siderophore transport system, periplasmic binding protein TonB
 
Rhodobacterales bacterium HTCC2654
 
Oceanicola granulosus HTCC2516
 
Loktanella vestfoldensis SKA53

Gene: SKA53_06392: Ferric siderophore transport system, periplasmic binding protein TonB
 
Oceanicola batsensis HTCC2597

Gene: OB2597_05450: Ferric siderophore transport system, periplasmic binding protein TonB
 
Roseovarius nubinhibens ISM

Gene: ISM_04245: Ferric siderophore transport system, periplasmic binding protein TonB
 
Roseovarius sp. 217

Gene: ROS217_22847: Ferric siderophore transport system, periplasmic binding protein TonB
 
Sulfitobacter sp. EE-36

Gene: EE36_13013: Ferric siderophore transport system, periplasmic binding protein TonB
 
Silicibacter TM1040

Gene: TM1040_0352: Ferric siderophore transport system, periplasmic binding protein TonB
 
Silicibacter pomeroyi DSS-3
 
Roseobacter sp. MED193

Gene: MED193_17529: Ferric siderophore transport system, periplasmic binding protein TonB
 
Hyphomonas neptunium ATCC 15444
 
Oceanicaulis alexandrii HTCC2633
Ferric siderophore transport system, periplasmic binding protein TonB
hemP
 
Rhodobacter sphaeroides 2.4.1
 
Paracoccus denitrificans PD1222
 
Jannaschia sp. CCS1
 
Rhodobacterales bacterium HTCC2654
 
Oceanicola granulosus HTCC2516
 
Loktanella vestfoldensis SKA53
*
Oceanicola batsensis HTCC2597

Site:
position = -192
score = 4.69091
sequence = CTTGACTAATTTGATCGGA

Site:
position = -149
score = 3.86438
sequence = TCCGAGTCGAATGCTCGGA

Gene: OB2597_05425: Hemin uptake protein HemP
 
Roseovarius nubinhibens ISM
 
Roseovarius sp. 217
 
Sulfitobacter sp. EE-36
 
Silicibacter TM1040
 
Silicibacter pomeroyi DSS-3
 
Roseobacter sp. MED193
 
Hyphomonas neptunium ATCC 15444
 
Oceanicaulis alexandrii HTCC2633
Hemin uptake protein HemP
 
CRON 10.
SKA53_15391
 
Rhodobacter sphaeroides 2.4.1
 
Paracoccus denitrificans PD1222
 
Jannaschia sp. CCS1
 
Rhodobacterales bacterium HTCC2654
 
Oceanicola granulosus HTCC2516
 
Loktanella vestfoldensis SKA53

Gene: SKA53_15391: hypothetical protein
 
Oceanicola batsensis HTCC2597
*
Roseovarius nubinhibens ISM

Site:
position = -81
score = 4.94595
sequence = TCCGACTCTTTTTGTCAGA

Gene: ISM_15940: hypothetical protein
 
Roseovarius sp. 217
 
Sulfitobacter sp. EE-36
 
Silicibacter TM1040
 
Silicibacter pomeroyi DSS-3
 
Roseobacter sp. MED193
 
Hyphomonas neptunium ATCC 15444
 
Oceanicaulis alexandrii HTCC2633
hypothetical protein
TM1040_2633
 
Rhodobacter sphaeroides 2.4.1
 
Paracoccus denitrificans PD1222
 
Jannaschia sp. CCS1
 
Rhodobacterales bacterium HTCC2654
 
Oceanicola granulosus HTCC2516
 
Loktanella vestfoldensis SKA53
 
Oceanicola batsensis HTCC2597
 
Roseovarius nubinhibens ISM

Gene: ISM_15945: hypothetical protein
 
Roseovarius sp. 217
 
Sulfitobacter sp. EE-36
*
Silicibacter TM1040

Site:
position = -116
score = 4.5035
sequence = TCCGACAAAAATACTAGGG

Gene: TM1040_2633: hypothetical protein
 
Silicibacter pomeroyi DSS-3
*
Roseobacter sp. MED193

Site:
position = -139
score = 5.34791
sequence = TCTGACTATTTTTGTCAGA

Gene: MED193_15812: hypothetical protein
 
Hyphomonas neptunium ATCC 15444
 
Oceanicaulis alexandrii HTCC2633
hypothetical protein
SKA53_15396
 
Rhodobacter sphaeroides 2.4.1
 
Paracoccus denitrificans PD1222
 
Jannaschia sp. CCS1
 
Rhodobacterales bacterium HTCC2654
 
Oceanicola granulosus HTCC2516
*
Loktanella vestfoldensis SKA53

Site:
position = -45
score = 4.76766
sequence = CCTGATTATTTATGTCAGG

Gene: SKA53_15396: hypothetical protein
 
Oceanicola batsensis HTCC2597
 
Roseovarius nubinhibens ISM
 
Roseovarius sp. 217
 
Sulfitobacter sp. EE-36
 
Silicibacter TM1040
 
Silicibacter pomeroyi DSS-3
 
Roseobacter sp. MED193
 
Hyphomonas neptunium ATCC 15444
 
Oceanicaulis alexandrii HTCC2633
hypothetical protein
 
CRON 11.
exbB
*
Rhodobacter sphaeroides 2.4.1

Site:
position = -134
score = 4.01655
sequence = CTTGACTGTTTTCGTAAAC

Gene: RSP_0920: Biopolymer transport protein, ExbB
 
Paracoccus denitrificans PD1222

Gene: Pden_0727: Biopolymer transport protein, ExbB
 
Jannaschia sp. CCS1
 
Rhodobacterales bacterium HTCC2654
 
Oceanicola granulosus HTCC2516
 
Loktanella vestfoldensis SKA53
 
Oceanicola batsensis HTCC2597
 
Roseovarius nubinhibens ISM
 
Roseovarius sp. 217
 
Sulfitobacter sp. EE-36
 
Silicibacter TM1040
 
Silicibacter pomeroyi DSS-3
 
Roseobacter sp. MED193
 
Hyphomonas neptunium ATCC 15444
 
Oceanicaulis alexandrii HTCC2633
Biopolymer transport protein, ExbB
exbD
 
Rhodobacter sphaeroides 2.4.1

Gene: RSP_0921: Biopolymer transport protein ExbD/TolR
 
Paracoccus denitrificans PD1222

Gene: Pden_0726: Biopolymer transport protein ExbD/TolR
 
Jannaschia sp. CCS1
 
Rhodobacterales bacterium HTCC2654
 
Oceanicola granulosus HTCC2516
 
Loktanella vestfoldensis SKA53
 
Oceanicola batsensis HTCC2597
 
Roseovarius nubinhibens ISM
 
Roseovarius sp. 217
 
Sulfitobacter sp. EE-36
 
Silicibacter TM1040
 
Silicibacter pomeroyi DSS-3
 
Roseobacter sp. MED193
 
Hyphomonas neptunium ATCC 15444
 
Oceanicaulis alexandrii HTCC2633
Biopolymer transport protein ExbD/TolR
tonB
 
Rhodobacter sphaeroides 2.4.1

Gene: RSP_0922: Ferric siderophore transport system, periplasmic binding protein TonB
 
Paracoccus denitrificans PD1222

Gene: Pden_0725: Ferric siderophore transport system, periplasmic binding protein TonB
 
Jannaschia sp. CCS1
 
Rhodobacterales bacterium HTCC2654
 
Oceanicola granulosus HTCC2516
 
Loktanella vestfoldensis SKA53
 
Oceanicola batsensis HTCC2597
 
Roseovarius nubinhibens ISM
 
Roseovarius sp. 217
 
Sulfitobacter sp. EE-36
 
Silicibacter TM1040
 
Silicibacter pomeroyi DSS-3
 
Roseobacter sp. MED193
 
Hyphomonas neptunium ATCC 15444
 
Oceanicaulis alexandrii HTCC2633
Ferric siderophore transport system, periplasmic binding protein TonB
 
CRON 12.
fecI
*
Rhodobacter sphaeroides 2.4.1

Site:
position = -70
score = 4.25368
sequence = GCCGAGCGATATTGTCGGG

Gene: RSP_4275: RNA polymerase sigma-70 factor, ECF subfamily
 
Paracoccus denitrificans PD1222

Gene: Pden_1629: RNA polymerase sigma-70 factor, ECF subfamily
 
Jannaschia sp. CCS1
 
Rhodobacterales bacterium HTCC2654
 
Oceanicola granulosus HTCC2516
 
Loktanella vestfoldensis SKA53
 
Oceanicola batsensis HTCC2597
 
Roseovarius nubinhibens ISM
 
Roseovarius sp. 217
 
Sulfitobacter sp. EE-36
 
Silicibacter TM1040
 
Silicibacter pomeroyi DSS-3
 
Roseobacter sp. MED193
 
Hyphomonas neptunium ATCC 15444
 
Oceanicaulis alexandrii HTCC2633
RNA polymerase sigma-70 factor, ECF subfamily
fecR
 
Rhodobacter sphaeroides 2.4.1

Gene: RSP_4274: FecR protein
 
Paracoccus denitrificans PD1222

Gene: Pden_1630: FecR protein
 
Jannaschia sp. CCS1
 
Rhodobacterales bacterium HTCC2654
 
Oceanicola granulosus HTCC2516
 
Loktanella vestfoldensis SKA53
 
Oceanicola batsensis HTCC2597
 
Roseovarius nubinhibens ISM
 
Roseovarius sp. 217
 
Sulfitobacter sp. EE-36
 
Silicibacter TM1040
 
Silicibacter pomeroyi DSS-3
 
Roseobacter sp. MED193
 
Hyphomonas neptunium ATCC 15444
 
Oceanicaulis alexandrii HTCC2633
FecR protein
fhuA
 
Rhodobacter sphaeroides 2.4.1

Gene: RSP_4273: TonB-dependent receptor protein
 
Paracoccus denitrificans PD1222

Gene: Pden_1631: TonB-dependent receptor protein
 
Jannaschia sp. CCS1
 
Rhodobacterales bacterium HTCC2654
 
Oceanicola granulosus HTCC2516
 
Loktanella vestfoldensis SKA53
 
Oceanicola batsensis HTCC2597
 
Roseovarius nubinhibens ISM
 
Roseovarius sp. 217
 
Sulfitobacter sp. EE-36
 
Silicibacter TM1040
 
Silicibacter pomeroyi DSS-3
 
Roseobacter sp. MED193
 
Hyphomonas neptunium ATCC 15444
 
Oceanicaulis alexandrii HTCC2633
TonB-dependent receptor protein
fhuD
 
Rhodobacter sphaeroides 2.4.1

Gene: RSP_4272: ABC cobalamin/Fe3+-siderophore transporter, periplasmic ligand binding protein
 
Paracoccus denitrificans PD1222
 
Jannaschia sp. CCS1
 
Rhodobacterales bacterium HTCC2654
 
Oceanicola granulosus HTCC2516
 
Loktanella vestfoldensis SKA53
 
Oceanicola batsensis HTCC2597
 
Roseovarius nubinhibens ISM
 
Roseovarius sp. 217
 
Sulfitobacter sp. EE-36
 
Silicibacter TM1040
 
Silicibacter pomeroyi DSS-3
 
Roseobacter sp. MED193
 
Hyphomonas neptunium ATCC 15444
 
Oceanicaulis alexandrii HTCC2633
ABC cobalamin/Fe3+-siderophore transporter, periplasmic ligand binding protein
fhuB
 
Rhodobacter sphaeroides 2.4.1

Gene: RSP_4271: ABC cobalamin/Fe3+-siderophore transporter, inner membrane subunit
 
Paracoccus denitrificans PD1222
 
Jannaschia sp. CCS1
 
Rhodobacterales bacterium HTCC2654
 
Oceanicola granulosus HTCC2516
 
Loktanella vestfoldensis SKA53
 
Oceanicola batsensis HTCC2597
 
Roseovarius nubinhibens ISM
 
Roseovarius sp. 217
 
Sulfitobacter sp. EE-36
 
Silicibacter TM1040
 
Silicibacter pomeroyi DSS-3
 
Roseobacter sp. MED193
 
Hyphomonas neptunium ATCC 15444
 
Oceanicaulis alexandrii HTCC2633
ABC cobalamin/Fe3+-siderophore transporter, inner membrane subunit
fhuC
 
Rhodobacter sphaeroides 2.4.1

Gene: RSP_7397: Ferric hydroxamate ABC transporter (TC 3.A.1.14.3), ATP-binding protein FhuC
 
Paracoccus denitrificans PD1222
 
Jannaschia sp. CCS1
 
Rhodobacterales bacterium HTCC2654
 
Oceanicola granulosus HTCC2516
 
Loktanella vestfoldensis SKA53
 
Oceanicola batsensis HTCC2597
 
Roseovarius nubinhibens ISM
 
Roseovarius sp. 217
 
Sulfitobacter sp. EE-36
 
Silicibacter TM1040
 
Silicibacter pomeroyi DSS-3
 
Roseobacter sp. MED193
 
Hyphomonas neptunium ATCC 15444
 
Oceanicaulis alexandrii HTCC2633
Ferric hydroxamate ABC transporter (TC 3.A.1.14.3), ATP-binding protein FhuC
 
CRON 13.
fecB
*
Rhodobacter sphaeroides 2.4.1

Site:
position = -142
score = 4.55986
sequence = TCCGACTGTTCTTGTCGGA

Gene: RSP_3416: ABC-type Fe3+-hydroxamate transport system, periplasmic component
*
Paracoccus denitrificans PD1222

Site:
position = -128
score = 4.14418
sequence = TCCTATTCTTTTTGTCGGA

Gene: Pden_3522: ABC-type Fe3+-hydroxamate transport system, periplasmic component
*
Jannaschia sp. CCS1

Site:
position = -36
score = 5.0684
sequence = TCTGACTAAAATACTCAAC

Site:
position = -61
score = 4.38127
sequence = TCTAACTATTTCTGTCAGC

Gene: Jann_2122: ABC-type Fe3+-hydroxamate transport system, periplasmic component
*
Rhodobacterales bacterium HTCC2654

Site:
position = -67
score = 4.93599
sequence = CCCGACTGATTTAGTCAAT

Site:
position = -34
score = 4.69052
sequence = TCCGACTGAAACACTCAAC

Gene: RB2654_09494: ABC-type Fe3+-hydroxamate transport system, periplasmic component
 
Oceanicola granulosus HTCC2516
 
Loktanella vestfoldensis SKA53
*
Oceanicola batsensis HTCC2597

Site:
position = -123
score = 3.83205
sequence = CCCGCCCAAAACTGTCGGG

Site:
position = -154
score = 4.2224
sequence = ATCGACTGTTTTTGTCGGT

Gene: OB2597_09404: ABC-type Fe3+-hydroxamate transport system, periplasmic component
 
Roseovarius nubinhibens ISM
 
Roseovarius sp. 217
 
Sulfitobacter sp. EE-36
 
Silicibacter TM1040
 
Silicibacter pomeroyi DSS-3
*
Roseobacter sp. MED193

Site:
position = -355
score = 4.01213
sequence = CTTGACAAAACCTGTAAGG

Gene: MED193_22076: ABC-type Fe3+-hydroxamate transport system, periplasmic component
 
Hyphomonas neptunium ATCC 15444
 
Oceanicaulis alexandrii HTCC2633
ABC-type Fe3+-hydroxamate transport system, periplasmic component
fecC
 
Rhodobacter sphaeroides 2.4.1

Gene: RSP_3415: ABC-type Fe3+-siderophore transport system, permease component
 
Paracoccus denitrificans PD1222

Gene: Pden_3523: ABC-type Fe3+-siderophore transport system, permease component
*
Jannaschia sp. CCS1

Site:
position = -59
score = 5.0684
sequence = GTTGAGTATTTTAGTCAGA

Site:
position = -34
score = 4.38127
sequence = GCTGACAGAAATAGTTAGA

Gene: Jann_2123: ABC-type Fe3+-siderophore transport system, permease component
*
Rhodobacterales bacterium HTCC2654

Site:
position = -87
score = 4.69052
sequence = GTTGAGTGTTTCAGTCGGA

Site:
position = -54
score = 4.93599
sequence = ATTGACTAAATCAGTCGGG

Gene: RB2654_09499: ABC-type Fe3+-siderophore transport system, permease component
 
Oceanicola granulosus HTCC2516
 
Loktanella vestfoldensis SKA53
 
Oceanicola batsensis HTCC2597

Gene: OB2597_09399: ABC-type Fe3+-siderophore transport system, permease component
 
Roseovarius nubinhibens ISM
 
Roseovarius sp. 217
 
Sulfitobacter sp. EE-36
 
Silicibacter TM1040
 
Silicibacter pomeroyi DSS-3
 
Roseobacter sp. MED193

Gene: MED193_22071: ABC-type Fe3+-siderophore transport system, permease component
 
Hyphomonas neptunium ATCC 15444
 
Oceanicaulis alexandrii HTCC2633
ABC-type Fe3+-siderophore transport system, permease component
fecD
 
Rhodobacter sphaeroides 2.4.1

Gene: RSP_3414: ABC-type Fe3+-siderophore transport system, permease component
 
Paracoccus denitrificans PD1222

Gene: Pden_3524: ABC-type Fe3+-siderophore transport system, permease component
 
Jannaschia sp. CCS1

Gene: Jann_2124: ABC-type Fe3+-siderophore transport system, permease component
 
Rhodobacterales bacterium HTCC2654

Gene: RB2654_09504: ABC-type Fe3+-siderophore transport system, permease component
 
Oceanicola granulosus HTCC2516
 
Loktanella vestfoldensis SKA53
 
Oceanicola batsensis HTCC2597

Gene: OB2597_09394: ABC-type Fe3+-siderophore transport system, permease component
 
Roseovarius nubinhibens ISM
 
Roseovarius sp. 217
 
Sulfitobacter sp. EE-36
 
Silicibacter TM1040
 
Silicibacter pomeroyi DSS-3
 
Roseobacter sp. MED193

Gene: MED193_22066: ABC-type Fe3+-siderophore transport system, permease component
 
Hyphomonas neptunium ATCC 15444
 
Oceanicaulis alexandrii HTCC2633
ABC-type Fe3+-siderophore transport system, permease component
fecE
 
Rhodobacter sphaeroides 2.4.1

Gene: RSP_3413: ABC Fe+3-siderophore transporter, ATPase subunit
 
Paracoccus denitrificans PD1222

Gene: Pden_3525: ABC Fe+3-siderophore transporter, ATPase subunit
 
Jannaschia sp. CCS1

Gene: Jann_2125: ABC Fe+3-siderophore transporter, ATPase subunit
 
Rhodobacterales bacterium HTCC2654

Gene: RB2654_09509: ABC Fe+3-siderophore transporter, ATPase subunit
 
Oceanicola granulosus HTCC2516
 
Loktanella vestfoldensis SKA53
 
Oceanicola batsensis HTCC2597

Gene: OB2597_09389: ABC Fe+3-siderophore transporter, ATPase subunit
 
Roseovarius nubinhibens ISM
 
Roseovarius sp. 217
 
Sulfitobacter sp. EE-36
 
Silicibacter TM1040
 
Silicibacter pomeroyi DSS-3
 
Roseobacter sp. MED193

Gene: MED193_22061: ABC Fe+3-siderophore transporter, ATPase subunit
 
Hyphomonas neptunium ATCC 15444
 
Oceanicaulis alexandrii HTCC2633
ABC Fe+3-siderophore transporter, ATPase subunit
mxcB
 
Rhodobacter sphaeroides 2.4.1
 
Paracoccus denitrificans PD1222
 
Jannaschia sp. CCS1
 
Rhodobacterales bacterium HTCC2654
 
Oceanicola granulosus HTCC2516
 
Loktanella vestfoldensis SKA53
 
Oceanicola batsensis HTCC2597

Gene: OB2597_09384: Siderophore-interacting protein
 
Roseovarius nubinhibens ISM
 
Roseovarius sp. 217
 
Sulfitobacter sp. EE-36
 
Silicibacter TM1040
 
Silicibacter pomeroyi DSS-3
 
Roseobacter sp. MED193

Gene: MED193_22056: Siderophore-interacting protein
 
Hyphomonas neptunium ATCC 15444
 
Oceanicaulis alexandrii HTCC2633
Siderophore-interacting protein
exbB
 
Rhodobacter sphaeroides 2.4.1
 
Paracoccus denitrificans PD1222
 
Jannaschia sp. CCS1
 
Rhodobacterales bacterium HTCC2654
 
Oceanicola granulosus HTCC2516
 
Loktanella vestfoldensis SKA53
 
Oceanicola batsensis HTCC2597
 
Roseovarius nubinhibens ISM
 
Roseovarius sp. 217
 
Sulfitobacter sp. EE-36
 
Silicibacter TM1040
 
Silicibacter pomeroyi DSS-3
 
Roseobacter sp. MED193

Gene: MED193_22051: Ferric siderophore transport system, biopolymer transport protein ExbB
 
Hyphomonas neptunium ATCC 15444
 
Oceanicaulis alexandrii HTCC2633
Ferric siderophore transport system, biopolymer transport protein ExbB
exbD1
 
Rhodobacter sphaeroides 2.4.1
 
Paracoccus denitrificans PD1222
 
Jannaschia sp. CCS1
 
Rhodobacterales bacterium HTCC2654
 
Oceanicola granulosus HTCC2516
 
Loktanella vestfoldensis SKA53
 
Oceanicola batsensis HTCC2597
 
Roseovarius nubinhibens ISM
 
Roseovarius sp. 217
 
Sulfitobacter sp. EE-36
 
Silicibacter TM1040
 
Silicibacter pomeroyi DSS-3
 
Roseobacter sp. MED193

Gene: MED193_22046: Biopolymer transport protein ExbD/TolR
 
Hyphomonas neptunium ATCC 15444
 
Oceanicaulis alexandrii HTCC2633
Biopolymer transport protein ExbD/TolR
exbD2
 
Rhodobacter sphaeroides 2.4.1
 
Paracoccus denitrificans PD1222
 
Jannaschia sp. CCS1
 
Rhodobacterales bacterium HTCC2654
 
Oceanicola granulosus HTCC2516
 
Loktanella vestfoldensis SKA53
 
Oceanicola batsensis HTCC2597
 
Roseovarius nubinhibens ISM
 
Roseovarius sp. 217
 
Sulfitobacter sp. EE-36
 
Silicibacter TM1040
 
Silicibacter pomeroyi DSS-3
 
Roseobacter sp. MED193

Gene: MED193_22041: Biopolymer transport protein ExbD/TolR
 
Hyphomonas neptunium ATCC 15444
 
Oceanicaulis alexandrii HTCC2633
Biopolymer transport protein ExbD/TolR
tonB
 
Rhodobacter sphaeroides 2.4.1
 
Paracoccus denitrificans PD1222
 
Jannaschia sp. CCS1
 
Rhodobacterales bacterium HTCC2654
 
Oceanicola granulosus HTCC2516
 
Loktanella vestfoldensis SKA53
 
Oceanicola batsensis HTCC2597
 
Roseovarius nubinhibens ISM
 
Roseovarius sp. 217
 
Sulfitobacter sp. EE-36
 
Silicibacter TM1040
 
Silicibacter pomeroyi DSS-3
 
Roseobacter sp. MED193

Gene: MED193_22036: Ferric siderophore transport system, periplasmic binding protein TonB
 
Hyphomonas neptunium ATCC 15444
 
Oceanicaulis alexandrii HTCC2633
Ferric siderophore transport system, periplasmic binding protein TonB
 
CRON 14.
RSP_3417
*
Rhodobacter sphaeroides 2.4.1

Site:
position = -204
score = 4.55986
sequence = TCCGACAAGAACAGTCGGA

Gene: RSP_3417: Ferrichrome-iron receptor
*
Paracoccus denitrificans PD1222

Site:
position = -164
score = 4.14418
sequence = TCCGACAAAAAGAATAGGA

Gene: Pden_3521: Ferrichrome-iron receptor
 
Jannaschia sp. CCS1
 
Rhodobacterales bacterium HTCC2654
 
Oceanicola granulosus HTCC2516
 
Loktanella vestfoldensis SKA53
*
Oceanicola batsensis HTCC2597

Site:
position = -390
score = 4.36639
sequence = CATGATTGTTTCAGTCGGA

Site:
position = -318
score = 3.83205
sequence = CCCGACAGTTTTGGGCGGG

Site:
position = -287
score = 4.2224
sequence = ACCGACAAAAACAGTCGAT

Gene: OB2597_09409: Ferrichrome-iron receptor
 
Roseovarius nubinhibens ISM
 
Roseovarius sp. 217
 
Sulfitobacter sp. EE-36
 
Silicibacter TM1040
 
Silicibacter pomeroyi DSS-3
 
Roseobacter sp. MED193
 
Hyphomonas neptunium ATCC 15444
 
Oceanicaulis alexandrii HTCC2633
Ferrichrome-iron receptor
 
CRON 15.
iscR
*
Rhodobacter sphaeroides 2.4.1

Site:
position = -119
score = 4.3102
sequence = CTTGACAAAAACGCTCGGA

Gene: RSP_0443: Iron-sulfur cluster regulator IscR, Rrf2 family
 
Paracoccus denitrificans PD1222

Gene: Pden_2958: Iron-sulfur cluster regulator IscR, Rrf2 family
*
Jannaschia sp. CCS1

Site:
position = -127
score = 3.03027
sequence = GATTCCAAATTGTGTCGGG

Gene: Jann_2366: Iron-sulfur cluster regulator IscR, Rrf2 family
 
Rhodobacterales bacterium HTCC2654

Gene: RB2654_04009: Iron-sulfur cluster regulator IscR, Rrf2 family
 
Oceanicola granulosus HTCC2516

Gene: OG2516_03700: Iron-sulfur cluster regulator IscR, Rrf2 family
*
Loktanella vestfoldensis SKA53

Site:
position = -131
score = 4.24783
sequence = CTTGACGAAAACTATCAGG

Gene: SKA53_05183: Iron-sulfur cluster regulator IscR, Rrf2 family
*
Oceanicola batsensis HTCC2597

Site:
position = -134
score = 3.76096
sequence = CTTGACGACTTTGGTCAAG

Gene: OB2597_03589: Iron-sulfur cluster regulator IscR, Rrf2 family
 
Roseovarius nubinhibens ISM

Gene: ISM_16015: Iron-sulfur cluster regulator IscR, Rrf2 family
*
Roseovarius sp. 217

Site:
position = -120
score = 3.52932
sequence = CTTGACGACTTCGCTCGGG

Gene: ROS217_20542: Iron-sulfur cluster regulator IscR, Rrf2 family
*
Sulfitobacter sp. EE-36

Site:
position = -136
score = 3.63634
sequence = GTTGACGAATTCGCTAGGG

Gene: EE36_14302: Iron-sulfur cluster regulator IscR, Rrf2 family
*
Silicibacter TM1040

Site:
position = -137
score = 3.86437
sequence = CTTGACGAATTTTATCCGG

Gene: TM1040_1240: Iron-sulfur cluster regulator IscR, Rrf2 family
*
Silicibacter pomeroyi DSS-3

Site:
position = -141
score = 4.11843
sequence = CTTGACGAATTCCCTCGGG

Gene: SPO2025: Iron-sulfur cluster regulator IscR, Rrf2 family
*
Roseobacter sp. MED193

Site:
position = -144
score = 4.02578
sequence = CTTGACGAATTCCATCAGC

Gene: MED193_04321: Iron-sulfur cluster regulator IscR, Rrf2 family
 
Hyphomonas neptunium ATCC 15444
 
Oceanicaulis alexandrii HTCC2633

Gene: OA2633_03246: Iron-sulfur cluster regulator IscR, Rrf2 family
Iron-sulfur cluster regulator IscR, Rrf2 family
iscS
 
Rhodobacter sphaeroides 2.4.1

Gene: RSP_0442: Cysteine desulfurase (EC 2.8.1.7)
 
Paracoccus denitrificans PD1222

Gene: Pden_3963: Cysteine desulfurase (EC 2.8.1.7)
 
Jannaschia sp. CCS1

Gene: Jann_2365: Cysteine desulfurase (EC 2.8.1.7)
 
Rhodobacterales bacterium HTCC2654

Gene: RB2654_04004: Cysteine desulfurase (EC 2.8.1.7)
 
Oceanicola granulosus HTCC2516

Gene: OG2516_03695: Cysteine desulfurase (EC 2.8.1.7)
 
Loktanella vestfoldensis SKA53

Gene: SKA53_05178: Cysteine desulfurase (EC 2.8.1.7)
 
Oceanicola batsensis HTCC2597

Gene: OB2597_03584: Cysteine desulfurase (EC 2.8.1.7)
 
Roseovarius nubinhibens ISM

Gene: ISM_16010: Cysteine desulfurase (EC 2.8.1.7)
 
Roseovarius sp. 217

Gene: ROS217_20537: Cysteine desulfurase (EC 2.8.1.7)
 
Sulfitobacter sp. EE-36

Gene: EE36_14307: Cysteine desulfurase (EC 2.8.1.7)
 
Silicibacter TM1040

Gene: TM1040_1241: Cysteine desulfurase (EC 2.8.1.7)
 
Silicibacter pomeroyi DSS-3
 
Roseobacter sp. MED193

Gene: MED193_04316: Cysteine desulfurase (EC 2.8.1.7)
 
Hyphomonas neptunium ATCC 15444

Gene: HNE_2620: Cysteine desulfurase (EC 2.8.1.7)
 
Oceanicaulis alexandrii HTCC2633

Gene: OA2633_03241: Cysteine desulfurase (EC 2.8.1.7)
Cysteine desulfurase (EC 2.8.1.7)
sufB
 
Rhodobacter sphaeroides 2.4.1

Gene: RSP_0440: Iron-sulfur cluster assembly protein SufB
 
Paracoccus denitrificans PD1222

Gene: Pden_3964: Iron-sulfur cluster assembly protein SufB
 
Jannaschia sp. CCS1

Gene: Jann_2364: Iron-sulfur cluster assembly protein SufB
 
Rhodobacterales bacterium HTCC2654

Gene: RB2654_03999: Iron-sulfur cluster assembly protein SufB
 
Oceanicola granulosus HTCC2516

Gene: OG2516_03690: Iron-sulfur cluster assembly protein SufB
 
Loktanella vestfoldensis SKA53

Gene: SKA53_05173: Iron-sulfur cluster assembly protein SufB
 
Oceanicola batsensis HTCC2597

Gene: OB2597_03579: Iron-sulfur cluster assembly protein SufB
 
Roseovarius nubinhibens ISM

Gene: ISM_16005: Iron-sulfur cluster assembly protein SufB
 
Roseovarius sp. 217

Gene: ROS217_20532: Iron-sulfur cluster assembly protein SufB
 
Sulfitobacter sp. EE-36

Gene: EE36_14312: Iron-sulfur cluster assembly protein SufB
 
Silicibacter TM1040

Gene: TM1040_1242: Iron-sulfur cluster assembly protein SufB
 
Silicibacter pomeroyi DSS-3

Gene: SPO2023: Iron-sulfur cluster assembly protein SufB
 
Roseobacter sp. MED193

Gene: MED193_04311: Iron-sulfur cluster assembly protein SufB
 
Hyphomonas neptunium ATCC 15444

Gene: HNE_2619: Iron-sulfur cluster assembly protein SufB
 
Oceanicaulis alexandrii HTCC2633

Gene: OA2633_03236: Iron-sulfur cluster assembly protein SufB
Iron-sulfur cluster assembly protein SufB
Jann_2362
 
Rhodobacter sphaeroides 2.4.1
 
Paracoccus denitrificans PD1222
 2
Jannaschia sp. CCS1

Gene: Jann_2363: SAM-dependent methyltransferases

Gene: Jann_2362: SAM-dependent methyltransferases
 
Rhodobacterales bacterium HTCC2654
 
Oceanicola granulosus HTCC2516

Gene: OG2516_03685: SAM-dependent methyltransferases
 
Loktanella vestfoldensis SKA53
 
Oceanicola batsensis HTCC2597
 
Roseovarius nubinhibens ISM

Gene: ISM_15985: SAM-dependent methyltransferases
 
Roseovarius sp. 217
 
Sulfitobacter sp. EE-36
 
Silicibacter TM1040

Gene: TM1040_1244: SAM-dependent methyltransferases
 
Silicibacter pomeroyi DSS-3

Gene: SPO2020: SAM-dependent methyltransferases
 
Roseobacter sp. MED193
 
Hyphomonas neptunium ATCC 15444
 
Oceanicaulis alexandrii HTCC2633
SAM-dependent methyltransferases
Jann_2361
 
Rhodobacter sphaeroides 2.4.1
 
Paracoccus denitrificans PD1222
 
Jannaschia sp. CCS1

Gene: Jann_2361: ExoV domain protein
 
Rhodobacterales bacterium HTCC2654
 
Oceanicola granulosus HTCC2516
 
Loktanella vestfoldensis SKA53
 
Oceanicola batsensis HTCC2597
 
Roseovarius nubinhibens ISM
 
Roseovarius sp. 217
 
Sulfitobacter sp. EE-36

Gene: EE36_14322: ExoV domain protein
 
Silicibacter TM1040
 
Silicibacter pomeroyi DSS-3

Gene: SPO2019: ExoV domain protein
 
Roseobacter sp. MED193

Gene: MED193_04296: ExoV domain protein
 
Hyphomonas neptunium ATCC 15444
 
Oceanicaulis alexandrii HTCC2633
ExoV domain protein
Jann_2360
 
Rhodobacter sphaeroides 2.4.1
 
Paracoccus denitrificans PD1222
 
Jannaschia sp. CCS1

Gene: Jann_2360: Methyltransferase FkbM
 
Rhodobacterales bacterium HTCC2654
 
Oceanicola granulosus HTCC2516
 
Loktanella vestfoldensis SKA53
 
Oceanicola batsensis HTCC2597
 
Roseovarius nubinhibens ISM
 
Roseovarius sp. 217
 
Sulfitobacter sp. EE-36
 
Silicibacter TM1040
 
Silicibacter pomeroyi DSS-3
 
Roseobacter sp. MED193
 
Hyphomonas neptunium ATCC 15444
 
Oceanicaulis alexandrii HTCC2633
Methyltransferase FkbM
sufC
 
Rhodobacter sphaeroides 2.4.1

Gene: RSP_0437: Iron-sulfur cluster assembly ATPase protein SufC
 
Paracoccus denitrificans PD1222

Gene: Pden_3966: Iron-sulfur cluster assembly ATPase protein SufC
 
Jannaschia sp. CCS1

Gene: Jann_2359: Iron-sulfur cluster assembly ATPase protein SufC
 
Rhodobacterales bacterium HTCC2654

Gene: RB2654_03994: Iron-sulfur cluster assembly ATPase protein SufC
 
Oceanicola granulosus HTCC2516

Gene: OG2516_03675: Iron-sulfur cluster assembly ATPase protein SufC
 
Loktanella vestfoldensis SKA53

Gene: SKA53_05168: Iron-sulfur cluster assembly ATPase protein SufC
 
Oceanicola batsensis HTCC2597

Gene: OB2597_03564: Iron-sulfur cluster assembly ATPase protein SufC
 
Roseovarius nubinhibens ISM

Gene: ISM_15975: Iron-sulfur cluster assembly ATPase protein SufC
 
Roseovarius sp. 217

Gene: ROS217_20517: Iron-sulfur cluster assembly ATPase protein SufC
 
Sulfitobacter sp. EE-36

Gene: EE36_14327: Iron-sulfur cluster assembly ATPase protein SufC
 
Silicibacter TM1040

Gene: TM1040_1245: Iron-sulfur cluster assembly ATPase protein SufC
 
Silicibacter pomeroyi DSS-3

Gene: SPO2018: Iron-sulfur cluster assembly ATPase protein SufC
 
Roseobacter sp. MED193

Gene: MED193_04291: Iron-sulfur cluster assembly ATPase protein SufC
 
Hyphomonas neptunium ATCC 15444

Gene: HNE_2616: Iron-sulfur cluster assembly ATPase protein SufC
 
Oceanicaulis alexandrii HTCC2633

Gene: OA2633_03226: Iron-sulfur cluster assembly ATPase protein SufC
Iron-sulfur cluster assembly ATPase protein SufC
sufD
 
Rhodobacter sphaeroides 2.4.1
 
Paracoccus denitrificans PD1222

Gene: Pden_3967: Iron-sulfur cluster assembly protein SufD
 
Jannaschia sp. CCS1

Gene: Jann_2358: Iron-sulfur cluster assembly protein SufD
 
Rhodobacterales bacterium HTCC2654

Gene: RB2654_03989: Iron-sulfur cluster assembly protein SufD
 
Oceanicola granulosus HTCC2516

Gene: OG2516_03670: Iron-sulfur cluster assembly protein SufD
 
Loktanella vestfoldensis SKA53

Gene: SKA53_05163: Iron-sulfur cluster assembly protein SufD
 
Oceanicola batsensis HTCC2597

Gene: OB2597_03559: Iron-sulfur cluster assembly protein SufD
 
Roseovarius nubinhibens ISM

Gene: ISM_15970: Iron-sulfur cluster assembly protein SufD
 
Roseovarius sp. 217

Gene: ROS217_20512: Iron-sulfur cluster assembly protein SufD
 
Sulfitobacter sp. EE-36

Gene: EE36_14332: Iron-sulfur cluster assembly protein SufD
 
Silicibacter TM1040

Gene: TM1040_1246: Iron-sulfur cluster assembly protein SufD
 
Silicibacter pomeroyi DSS-3

Gene: SPO2017: Iron-sulfur cluster assembly protein SufD
 
Roseobacter sp. MED193

Gene: MED193_04286: Iron-sulfur cluster assembly protein SufD
 
Hyphomonas neptunium ATCC 15444

Gene: HNE_2615: Iron-sulfur cluster assembly protein SufD
 
Oceanicaulis alexandrii HTCC2633

Gene: OA2633_03221: Iron-sulfur cluster assembly protein SufD
Iron-sulfur cluster assembly protein SufD
RSP_0433
 
Rhodobacter sphaeroides 2.4.1

Gene: RSP_0433: hypothetical protein
 
Paracoccus denitrificans PD1222

Gene: Pden_3968: hypothetical protein
 
Jannaschia sp. CCS1

Gene: Jann_2357: hypothetical protein
 
Rhodobacterales bacterium HTCC2654

Gene: RB2654_03984: hypothetical protein
 
Oceanicola granulosus HTCC2516

Gene: OG2516_03665: hypothetical protein
 
Loktanella vestfoldensis SKA53

Gene: SKA53_05158: hypothetical protein
 
Oceanicola batsensis HTCC2597

Gene: OB2597_03554: hypothetical protein
 
Roseovarius nubinhibens ISM

Gene: ISM_15965: hypothetical protein
 
Roseovarius sp. 217

Gene: ROS217_20507: hypothetical protein
 
Sulfitobacter sp. EE-36

Gene: EE36_14337: hypothetical protein
 
Silicibacter TM1040

Gene: TM1040_1247: hypothetical protein
 
Silicibacter pomeroyi DSS-3

Gene: SPO2016: hypothetical protein
 
Roseobacter sp. MED193

Gene: MED193_04281: hypothetical protein
 
Hyphomonas neptunium ATCC 15444
 
Oceanicaulis alexandrii HTCC2633
hypothetical protein
RSP_0432
 
Rhodobacter sphaeroides 2.4.1

Gene: RSP_0432: hypothetical protein
 
Paracoccus denitrificans PD1222

Gene: Pden_3969: hypothetical protein
 
Jannaschia sp. CCS1

Gene: Jann_2356: hypothetical protein
 
Rhodobacterales bacterium HTCC2654

Gene: RB2654_03979: hypothetical protein
 
Oceanicola granulosus HTCC2516

Gene: OG2516_03660: hypothetical protein
 
Loktanella vestfoldensis SKA53

Gene: SKA53_05153: hypothetical protein
 
Oceanicola batsensis HTCC2597

Gene: OB2597_03549: hypothetical protein
 
Roseovarius nubinhibens ISM

Gene: ISM_15960: hypothetical protein
 
Roseovarius sp. 217

Gene: ROS217_20502: hypothetical protein
 
Sulfitobacter sp. EE-36

Gene: EE36_14342: hypothetical protein
 
Silicibacter TM1040

Gene: TM1040_1248: hypothetical protein
 
Silicibacter pomeroyi DSS-3

Gene: SPO2015: hypothetical protein
 
Roseobacter sp. MED193

Gene: MED193_04276: hypothetical protein
 
Hyphomonas neptunium ATCC 15444
 
Oceanicaulis alexandrii HTCC2633
hypothetical protein
sufS
 
Rhodobacter sphaeroides 2.4.1

Gene: RSP_0431: Cysteine desulfurase (EC 2.8.1.7), SufS subfamily
 
Paracoccus denitrificans PD1222

Gene: Pden_3970: Cysteine desulfurase (EC 2.8.1.7), SufS subfamily
 
Jannaschia sp. CCS1

Gene: Jann_2355: Cysteine desulfurase (EC 2.8.1.7), SufS subfamily
 
Rhodobacterales bacterium HTCC2654

Gene: RB2654_03974: Cysteine desulfurase (EC 2.8.1.7), SufS subfamily
 
Oceanicola granulosus HTCC2516

Gene: OG2516_03655: Cysteine desulfurase (EC 2.8.1.7), SufS subfamily
 
Loktanella vestfoldensis SKA53

Gene: SKA53_05148: Cysteine desulfurase (EC 2.8.1.7), SufS subfamily
 
Oceanicola batsensis HTCC2597

Gene: OB2597_03544: Cysteine desulfurase (EC 2.8.1.7), SufS subfamily
 
Roseovarius nubinhibens ISM

Gene: ISM_15955: Cysteine desulfurase (EC 2.8.1.7), SufS subfamily
 
Roseovarius sp. 217

Gene: ROS217_20497: Cysteine desulfurase (EC 2.8.1.7), SufS subfamily
 
Sulfitobacter sp. EE-36

Gene: EE36_14347: Cysteine desulfurase (EC 2.8.1.7), SufS subfamily
 
Silicibacter TM1040

Gene: TM1040_1249: Cysteine desulfurase (EC 2.8.1.7), SufS subfamily
 
Silicibacter pomeroyi DSS-3

Gene: SPO2014: Cysteine desulfurase (EC 2.8.1.7), SufS subfamily
 
Roseobacter sp. MED193

Gene: MED193_04271: Cysteine desulfurase (EC 2.8.1.7), SufS subfamily
 
Hyphomonas neptunium ATCC 15444

Gene: HNE_2614: Cysteine desulfurase (EC 2.8.1.7), SufS subfamily
 
Oceanicaulis alexandrii HTCC2633

Gene: OA2633_03216: Cysteine desulfurase (EC 2.8.1.7), SufS subfamily
Cysteine desulfurase (EC 2.8.1.7), SufS subfamily
MED193_04306
 
Rhodobacter sphaeroides 2.4.1
 
Paracoccus denitrificans PD1222
 
Jannaschia sp. CCS1
 
Rhodobacterales bacterium HTCC2654
 
Oceanicola granulosus HTCC2516
 
Loktanella vestfoldensis SKA53
 
Oceanicola batsensis HTCC2597
 
Roseovarius nubinhibens ISM
 
Roseovarius sp. 217
 
Sulfitobacter sp. EE-36
 
Silicibacter TM1040
 
Silicibacter pomeroyi DSS-3
 
Roseobacter sp. MED193

Gene: MED193_04306: hypothetical protein
 
Hyphomonas neptunium ATCC 15444
 
Oceanicaulis alexandrii HTCC2633
hypothetical protein
RSP_0439
 
Rhodobacter sphaeroides 2.4.1

Gene: RSP_0439: protein of unknown function DUF74
 
Paracoccus denitrificans PD1222

Gene: Pden_3965: protein of unknown function DUF74
 
Jannaschia sp. CCS1
 
Rhodobacterales bacterium HTCC2654
 
Oceanicola granulosus HTCC2516
 
Loktanella vestfoldensis SKA53
 
Oceanicola batsensis HTCC2597

Gene: OB2597_03574: protein of unknown function DUF74
 
Roseovarius nubinhibens ISM

Gene: ISM_16000: protein of unknown function DUF74
 
Roseovarius sp. 217

Gene: ROS217_20527: protein of unknown function DUF74
 
Sulfitobacter sp. EE-36
 
Silicibacter TM1040

Gene: TM1040_1243: protein of unknown function DUF74
 
Silicibacter pomeroyi DSS-3

Gene: SPO2021: protein of unknown function DUF74
 
Roseobacter sp. MED193

Gene: MED193_04301: protein of unknown function DUF74
 
Hyphomonas neptunium ATCC 15444
 
Oceanicaulis alexandrii HTCC2633
protein of unknown function DUF74
OG2516_03680
 
Rhodobacter sphaeroides 2.4.1
 
Paracoccus denitrificans PD1222
 
Jannaschia sp. CCS1
 
Rhodobacterales bacterium HTCC2654
 
Oceanicola granulosus HTCC2516

Gene: OG2516_03680: hypothetical protein
 
Loktanella vestfoldensis SKA53
 
Oceanicola batsensis HTCC2597

Gene: OB2597_03569: hypothetical protein
 
Roseovarius nubinhibens ISM

Gene: ISM_15980: hypothetical protein
 
Roseovarius sp. 217

Gene: ROS217_20522: hypothetical protein
 
Sulfitobacter sp. EE-36
 
Silicibacter TM1040
 
Silicibacter pomeroyi DSS-3

Gene: SPO2022: hypothetical protein
 
Roseobacter sp. MED193
 
Hyphomonas neptunium ATCC 15444
 
Oceanicaulis alexandrii HTCC2633
hypothetical protein
EE36_14317
 
Rhodobacter sphaeroides 2.4.1
 
Paracoccus denitrificans PD1222
 
Jannaschia sp. CCS1
 
Rhodobacterales bacterium HTCC2654
 
Oceanicola granulosus HTCC2516
 
Loktanella vestfoldensis SKA53
 
Oceanicola batsensis HTCC2597
 
Roseovarius nubinhibens ISM
 
Roseovarius sp. 217
 
Sulfitobacter sp. EE-36

Gene: EE36_14317: hypothetical protein
 
Silicibacter TM1040
 
Silicibacter pomeroyi DSS-3
 
Roseobacter sp. MED193
 
Hyphomonas neptunium ATCC 15444
 
Oceanicaulis alexandrii HTCC2633
hypothetical protein
 
CRON 16.
SKA53_06277
 
Rhodobacter sphaeroides 2.4.1
 
Paracoccus denitrificans PD1222
 
Jannaschia sp. CCS1
 
Rhodobacterales bacterium HTCC2654
 
Oceanicola granulosus HTCC2516
*
Loktanella vestfoldensis SKA53

Site:
position = -33
score = 5.07654
sequence = GCTGACTATATTTGTCGGG

Gene: SKA53_06277: hypothetical protein
 
Oceanicola batsensis HTCC2597
 
Roseovarius nubinhibens ISM
 
Roseovarius sp. 217
 
Sulfitobacter sp. EE-36
 
Silicibacter TM1040
 
Silicibacter pomeroyi DSS-3
 
Roseobacter sp. MED193
 
Hyphomonas neptunium ATCC 15444
 
Oceanicaulis alexandrii HTCC2633
hypothetical protein
dps
 
Rhodobacter sphaeroides 2.4.1
 
Paracoccus denitrificans PD1222
 
Jannaschia sp. CCS1

Gene: Jann_3276: DNA-binding ferritin-like protein (oxidative damage protectant)
 
Rhodobacterales bacterium HTCC2654
 
Oceanicola granulosus HTCC2516
 
Loktanella vestfoldensis SKA53

Gene: SKA53_06272: DNA-binding ferritin-like protein (oxidative damage protectant)
 
Oceanicola batsensis HTCC2597
 
Roseovarius nubinhibens ISM
 
Roseovarius sp. 217
 
Sulfitobacter sp. EE-36
 
Silicibacter TM1040

Gene: TM1040_2721: DNA-binding ferritin-like protein (oxidative damage protectant)
 
Silicibacter pomeroyi DSS-3
 
Roseobacter sp. MED193
 
Hyphomonas neptunium ATCC 15444

Gene: HNE_2969: DNA-binding ferritin-like protein (oxidative damage protectant)
*
Oceanicaulis alexandrii HTCC2633

Site:
position = -247
score = 4.08931
sequence = TCCGTGTGTATCAATCAGG

Gene: OA2633_03081: DNA-binding ferritin-like protein (oxidative damage protectant)
DNA-binding ferritin-like protein (oxidative damage protectant)
Jann_3277
 
Rhodobacter sphaeroides 2.4.1
 
Paracoccus denitrificans PD1222
*
Jannaschia sp. CCS1

Site:
position = -31
score = 4.83805
sequence = CCTGAGTAATACACTCAAG

Gene: Jann_3277: hypothetical protein
 
Rhodobacterales bacterium HTCC2654
 
Oceanicola granulosus HTCC2516
 
Loktanella vestfoldensis SKA53
 
Oceanicola batsensis HTCC2597
 
Roseovarius nubinhibens ISM
 
Roseovarius sp. 217
 
Sulfitobacter sp. EE-36
 
Silicibacter TM1040
 
Silicibacter pomeroyi DSS-3
 
Roseobacter sp. MED193
 
Hyphomonas neptunium ATCC 15444
 
Oceanicaulis alexandrii HTCC2633
hypothetical protein
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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