Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog HypR - Psychromonadaceae/Aeromonadales

Properties
Regulator type: Transcription factor
Regulator family: GntR/Others
Regulation mode: activator (repressor)
Biological process: Proline and 4-hydrohyproline utilization
Effector: Proline; 4-hydroxyproline
Phylum: Proteobacteria/gamma
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 8 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Psychromonas ingrahamii 37 3 2
Psychromonas sp. CNPT3
Moritella sp. PE36
Aeromonas hydrophila subsp. hydrophila ATCC 7966 3 2
Aeromonas salmonicida subsp. salmonicida A449 3 2
Tolumonas auensis DSM 9187
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
putA
 
Psychromonas ingrahamii 37
 
Psychromonas sp. CNPT3
 
Moritella sp. PE36
*
Aeromonas hydrophila subsp. hydrophila ATCC 7966

Site:
position = -78
score = 4.86675
sequence = ATTGTATACATT

Site:
position = -205
score = 5.18774
sequence = ATTGTATACAAA

Gene: AHA_0776: Proline dehydrogenase (EC 1.5.99.8) (Proline oxidase) / Delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.5.1.12)
*
Aeromonas salmonicida subsp. salmonicida A449

Site:
position = -204
score = 5.18774
sequence = ATTGTATACAAA

Site:
position = -77
score = 4.86675
sequence = ATTGTATACATT

Gene: ASA_0767: Proline dehydrogenase (EC 1.5.99.8) (Proline oxidase) / Delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.5.1.12)
 
Tolumonas auensis DSM 9187
Proline dehydrogenase (EC 1.5.99.8) (Proline oxidase) / Delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.5.1.12)
 
CRON 2.
hypY
*
Psychromonas ingrahamii 37

Site:
position = -84
score = 4.25515
sequence = ATTGGATCCAAT

Gene: Ping_2117: Proline racemase /4-hydroxyproline epimerase (EC 5.1.1.8)
 
Psychromonas sp. CNPT3
 
Moritella sp. PE36
 
Aeromonas hydrophila subsp. hydrophila ATCC 7966
 
Aeromonas salmonicida subsp. salmonicida A449
 
Tolumonas auensis DSM 9187
Proline racemase /4-hydroxyproline epimerase (EC 5.1.1.8)
hypS
 
Psychromonas ingrahamii 37

Gene: Ping_2116: Putative L-lactate/Malate dehydrogenase
 
Psychromonas sp. CNPT3
 
Moritella sp. PE36
 
Aeromonas hydrophila subsp. hydrophila ATCC 7966
 
Aeromonas salmonicida subsp. salmonicida A449
 
Tolumonas auensis DSM 9187
Putative L-lactate/Malate dehydrogenase
 
CRON 3.
hypR
*
Psychromonas ingrahamii 37

Site:
position = -107
score = 4.25515
sequence = ATTGGATCCAAT

Gene: Ping_2118: Predicted regulator for proline and hydrohyproline utilization, GntR family
 
Psychromonas sp. CNPT3
 
Moritella sp. PE36
*
Aeromonas hydrophila subsp. hydrophila ATCC 7966

Site:
position = -47
score = 4.35958
sequence = ACTTTATACAAT

Gene: AHA_0564: Predicted regulator for proline and hydrohyproline utilization, GntR family
*
Aeromonas salmonicida subsp. salmonicida A449

Site:
position = -47
score = 4.35958
sequence = ACTTTATACAAT

Gene: ASA_3770: Predicted regulator for proline and hydrohyproline utilization, GntR family
 
Tolumonas auensis DSM 9187
Predicted regulator for proline and hydrohyproline utilization, GntR family
ampP
 
Psychromonas ingrahamii 37

Gene: Ping_2545: Xaa-Pro aminopeptidase (EC 3.4.11.9)
 
Psychromonas sp. CNPT3
 
Moritella sp. PE36

Gene: PE36_24013: Xaa-Pro aminopeptidase (EC 3.4.11.9)
 
Aeromonas hydrophila subsp. hydrophila ATCC 7966

Gene: AHA_0563: Xaa-Pro aminopeptidase (EC 3.4.11.9)
 
Aeromonas salmonicida subsp. salmonicida A449

Gene: ASA_3769: Xaa-Pro aminopeptidase (EC 3.4.11.9)
 
Tolumonas auensis DSM 9187

Gene: Tola_3002: Xaa-Pro aminopeptidase (EC 3.4.11.9)
Xaa-Pro aminopeptidase (EC 3.4.11.9)
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulatory Sites [ FASTA format ] DOWNLOAD