Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog HutC - Caulobacterales

Properties
Regulator type: Transcription factor
Regulator family: GntR/Others
Regulation mode: repressor
Biological process: Histidine utilization
Effector: cis-Urocanic acid
Phylum: Proteobacteria/alpha
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 10 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Caulobacter crescentus CB15 6 2
Caulobacter segnis ATCC 21756 2 2
Caulobacter sp. K31 11 3
Phenylobacterium zucineum HLK1 10 3
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
omp
 
Caulobacter crescentus CB15
 
Caulobacter segnis ATCC 21756
*
Caulobacter sp. K31

Site:
position = -105
score = 4.93192
sequence = CAAATGTATATACATAGA

Gene: Caul_2355: TonB-dependent receptor
*
Phenylobacterium zucineum HLK1

Site:
position = -111
score = 4.73257
sequence = CTTATGTATATACATGAC

Gene: PHZ_c1482: TonB-dependent receptor
TonB-dependent receptor
Caul_2357
 
Caulobacter crescentus CB15
 
Caulobacter segnis ATCC 21756
 2
Caulobacter sp. K31

Gene: Caul_2356: Optional hypothetical component of omp transporter (PepSY-associated TM helix)

Gene: Caul_2357: Optional hypothetical component of omp transporter (PepSY-associated TM helix)
 2
Phenylobacterium zucineum HLK1

Gene: PHZ_c1483: Optional hypothetical component of omp transporter (PepSY-associated TM helix)

Gene: PHZ_c1484: Optional hypothetical component of omp transporter (PepSY-associated TM helix)
Optional hypothetical component of omp transporter (PepSY-associated TM helix)
hutC
 
Caulobacter crescentus CB15

Gene: CC0962: Histidine utilization repressor, GntR family
*
Caulobacter segnis ATCC 21756

Site:
position = -40
score = 5.62664
sequence = AATATGTATAGTCATATT

Gene: Cseg_3332: Histidine utilization repressor, GntR family
 2
Caulobacter sp. K31

Gene: Caul_2358: Histidine utilization repressor, GntR family

Gene: Caul_1300: Histidine utilization repressor, GntR family
 2
Phenylobacterium zucineum HLK1

Gene: PHZ_c1485: Histidine utilization repressor, GntR family

Gene: PHZ_c0463: Histidine utilization repressor, GntR family
Histidine utilization repressor, GntR family
hutF
*
Caulobacter crescentus CB15

Site:
position = -40
score = 6.22479
sequence = AATATGTATAGACATATT

Gene: CC0961: Formiminoglutamic iminohydrolase (EC 3.5.3.13)
 
Caulobacter segnis ATCC 21756
*
Caulobacter sp. K31

Site:
position = -40
score = 5.78636
sequence = GATATGTATAGACATATT

Gene: Caul_1299: Formiminoglutamic iminohydrolase (EC 3.5.3.13)
*
Phenylobacterium zucineum HLK1

Site:
position = -41
score = 6.07955
sequence = AATATGTATAGACATTAT

Gene: PHZ_c0464: Formiminoglutamic iminohydrolase (EC 3.5.3.13)
Formiminoglutamic iminohydrolase (EC 3.5.3.13)
 
CRON 2.
hutI
*
Caulobacter crescentus CB15

Site:
position = -62
score = 6.22479
sequence = AATATGTCTATACATATT

Gene: CC0960: Imidazolonepropionase (EC 3.5.2.7)
 
Caulobacter segnis ATCC 21756
*
Caulobacter sp. K31

Site:
position = -64
score = 5.78636
sequence = AATATGTCTATACATATC

Gene: Caul_1298: Imidazolonepropionase (EC 3.5.2.7)
*
Phenylobacterium zucineum HLK1

Site:
position = -44
score = 6.07955
sequence = ATAATGTCTATACATATT

Gene: PHZ_c0465: Imidazolonepropionase (EC 3.5.2.7)
Imidazolonepropionase (EC 3.5.2.7)
hutH
 
Caulobacter crescentus CB15

Gene: CC0959: Histidine ammonia-lyase (EC 4.3.1.3)
*
Caulobacter segnis ATCC 21756

Site:
position = -70
score = 5.62664
sequence = AATATGACTATACATATT

Gene: Cseg_3333: Histidine ammonia-lyase (EC 4.3.1.3)
 
Caulobacter sp. K31

Gene: Caul_1297: Histidine ammonia-lyase (EC 4.3.1.3)
 
Phenylobacterium zucineum HLK1

Gene: PHZ_c0466: Histidine ammonia-lyase (EC 4.3.1.3)
Histidine ammonia-lyase (EC 4.3.1.3)
hutG
 
Caulobacter crescentus CB15

Gene: CC0958: N-formylglutamate deformylase (EC 3.5.1.68)
 
Caulobacter segnis ATCC 21756
 
Caulobacter sp. K31

Gene: Caul_1296: N-formylglutamate deformylase (EC 3.5.1.68)
 
Phenylobacterium zucineum HLK1

Gene: PHZ_c0467: N-formylglutamate deformylase (EC 3.5.1.68)
N-formylglutamate deformylase (EC 3.5.1.68)
hutU
 
Caulobacter crescentus CB15

Gene: CC0957: Urocanate hydratase (EC 4.2.1.49)
 
Caulobacter segnis ATCC 21756
 
Caulobacter sp. K31

Gene: Caul_1295: Urocanate hydratase (EC 4.2.1.49)
 
Phenylobacterium zucineum HLK1

Gene: PHZ_c0468: Urocanate hydratase (EC 4.2.1.49)
Urocanate hydratase (EC 4.2.1.49)
hutD
 
Caulobacter crescentus CB15
 
Caulobacter segnis ATCC 21756
 
Caulobacter sp. K31

Gene: Caul_1294: Conserved hypothetical protein related to histidine degradation
 
Phenylobacterium zucineum HLK1
Conserved hypothetical protein related to histidine degradation
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD