Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog PrpR - Moraxellaceae

Properties
Regulator type: Transcription factor
Regulator family: GntR/Others
Regulation mode: repressor
Biological process: Methylcitrate utilization
Effector: 2-methylcitrate
Phylum: Proteobacteria/gamma
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 5 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Acinetobacter sp. ADP1 4 1
Acinetobacter baumannii AB0057 4 1
Psychrobacter arcticum 273-4
Psychrobacter sp. PRwf-1
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
prpR
*
Acinetobacter sp. ADP1

Site:
position = -142
score = 5.37094
sequence = ATTGTCAACAAT

Site:
position = -12
score = 5.82454
sequence = ATTGTCGACAAT

Gene: ACIAD2759: Propionate catabolism transcriptional regulator, GntR family
*
Acinetobacter baumannii AB0057

Site:
position = -75
score = 4.82561
sequence = AGTGTCAACAAT

Site:
position = -291
score = 5.28588
sequence = ATTGTCTACAAT

Site:
position = -12
score = 5.82454
sequence = ATTGTCGACAAT

Gene: AB57_0121: Propionate catabolism transcriptional regulator, GntR family
 
Psychrobacter arcticum 273-4
 
Psychrobacter sp. PRwf-1
Propionate catabolism transcriptional regulator, GntR family
prpB
 
Acinetobacter sp. ADP1

Gene: ACIAD2758: Methylisocitrate lyase (EC 4.1.3.30)
 
Acinetobacter baumannii AB0057

Gene: AB57_0122: Methylisocitrate lyase (EC 4.1.3.30)
 
Psychrobacter arcticum 273-4

Gene: Psyc_1110: Methylisocitrate lyase (EC 4.1.3.30)
 
Psychrobacter sp. PRwf-1

Gene: PsycPRwf_1197: Methylisocitrate lyase (EC 4.1.3.30)
Methylisocitrate lyase (EC 4.1.3.30)
prpC
 
Acinetobacter sp. ADP1

Gene: ACIAD2756: 2-methylcitrate synthase (EC 2.3.3.5)
 
Acinetobacter baumannii AB0057

Gene: AB57_0123: 2-methylcitrate synthase (EC 2.3.3.5)
 
Psychrobacter arcticum 273-4

Gene: Psyc_1111: 2-methylcitrate synthase (EC 2.3.3.5)
 
Psychrobacter sp. PRwf-1

Gene: PsycPRwf_1198: 2-methylcitrate synthase (EC 2.3.3.5)
2-methylcitrate synthase (EC 2.3.3.5)
acnD
 
Acinetobacter sp. ADP1

Gene: ACIAD2755: Aconitate hydratase, predicted 2-methylcitrate dehydratase FeS dependent (EC 4.2.1.79)
 
Acinetobacter baumannii AB0057

Gene: AB57_0124: Aconitate hydratase, predicted 2-methylcitrate dehydratase FeS dependent (EC 4.2.1.79)
 
Psychrobacter arcticum 273-4

Gene: Psyc_1112: Aconitate hydratase, predicted 2-methylcitrate dehydratase FeS dependent (EC 4.2.1.79)
 
Psychrobacter sp. PRwf-1

Gene: PsycPRwf_1199: Aconitate hydratase, predicted 2-methylcitrate dehydratase FeS dependent (EC 4.2.1.79)
Aconitate hydratase, predicted 2-methylcitrate dehydratase FeS dependent (EC 4.2.1.79)
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD