Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog PrpR - Psychromonadaceae/Aeromonadales

Properties
Regulator type: Transcription factor
Regulator family: GntR/Others
Regulation mode: repressor
Biological process: Methylcitrate utilization
Effector: 2-methylcitrate
Phylum: Proteobacteria/gamma
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 5 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Psychromonas ingrahamii 37 6 1
Psychromonas sp. CNPT3
Moritella sp. PE36 6 2
Aeromonas hydrophila subsp. hydrophila ATCC 7966
Aeromonas salmonicida subsp. salmonicida A449
Tolumonas auensis DSM 9187
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
prpR
*
Psychromonas ingrahamii 37

Site:
position = 18
score = 4.73073
sequence = ATTGTAGACAAC

Site:
position = -44
score = 5.82454
sequence = ATTGTCGACAAT

Gene: Ping_1870: Propionate catabolism operon transcriptional regulator of GntR family [predicted]
 
Psychromonas sp. CNPT3
*2
Moritella sp. PE36

Site:
position = -55
score = 4.60016
sequence = ATTGTCGACATG

Gene: PE36_01060: Propionate catabolism operon transcriptional regulator of GntR family [predicted]

Site:
position = -15
score = 5.82454
sequence = ATTGTCGACAAT

Site:
position = -63
score = 4.35867
sequence = GATGTTGACAAT

Gene: PE36_01070: Propionate catabolism operon transcriptional regulator of GntR family [predicted]
 
Aeromonas hydrophila subsp. hydrophila ATCC 7966
 
Aeromonas salmonicida subsp. salmonicida A449
 
Tolumonas auensis DSM 9187
Propionate catabolism operon transcriptional regulator of GntR family [predicted]
prpB
 
Psychromonas ingrahamii 37

Gene: Ping_1869: Methylisocitrate lyase (EC 4.1.3.30)
 
Psychromonas sp. CNPT3
 
Moritella sp. PE36

Gene: PE36_01055: Methylisocitrate lyase (EC 4.1.3.30)
 
Aeromonas hydrophila subsp. hydrophila ATCC 7966

Gene: AHA_2265: Methylisocitrate lyase (EC 4.1.3.30)
 
Aeromonas salmonicida subsp. salmonicida A449

Gene: ASA_2041: Methylisocitrate lyase (EC 4.1.3.30)
 
Tolumonas auensis DSM 9187
Methylisocitrate lyase (EC 4.1.3.30)
prpC
 
Psychromonas ingrahamii 37

Gene: Ping_1868: 2-methylcitrate synthase (EC 2.3.3.5)
 
Psychromonas sp. CNPT3
 
Moritella sp. PE36

Gene: PE36_01050: 2-methylcitrate synthase (EC 2.3.3.5)
 
Aeromonas hydrophila subsp. hydrophila ATCC 7966

Gene: AHA_2266: 2-methylcitrate synthase (EC 2.3.3.5)
 
Aeromonas salmonicida subsp. salmonicida A449

Gene: ASA_2040: 2-methylcitrate synthase (EC 2.3.3.5)
 
Tolumonas auensis DSM 9187
2-methylcitrate synthase (EC 2.3.3.5)
acnD
 
Psychromonas ingrahamii 37

Gene: Ping_1867: Aconitate hydratase, predicted 2-methylcitrate dehydratase FeS dependent (EC 4.2.1.79)
 
Psychromonas sp. CNPT3
 
Moritella sp. PE36

Gene: PE36_01045: Aconitate hydratase, predicted 2-methylcitrate dehydratase FeS dependent (EC 4.2.1.79)
 
Aeromonas hydrophila subsp. hydrophila ATCC 7966
 
Aeromonas salmonicida subsp. salmonicida A449
 
Tolumonas auensis DSM 9187
Aconitate hydratase, predicted 2-methylcitrate dehydratase FeS dependent (EC 4.2.1.79)
prpF
 
Psychromonas ingrahamii 37

Gene: Ping_1866: Aconitase accessory protein PrpF
 
Psychromonas sp. CNPT3
 
Moritella sp. PE36

Gene: PE36_01040: Aconitase accessory protein PrpF
 
Aeromonas hydrophila subsp. hydrophila ATCC 7966
 
Aeromonas salmonicida subsp. salmonicida A449
 
Tolumonas auensis DSM 9187
Aconitase accessory protein PrpF
prpE
 
Psychromonas ingrahamii 37

Gene: Ping_1865: Propionyl-CoA synthetase (EC 6.2.1.17)
 
Psychromonas sp. CNPT3
 
Moritella sp. PE36
 
Aeromonas hydrophila subsp. hydrophila ATCC 7966
 
Aeromonas salmonicida subsp. salmonicida A449
 
Tolumonas auensis DSM 9187
Propionyl-CoA synthetase (EC 6.2.1.17)
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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