Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog NorR - Pseudomonadaceae

Properties
Regulator type: Transcription factor
Regulator family: Fis
Regulation mode: activator (repressor)
Biological process: Nitrosative stress response
Effector: Nitric oxide
Phylum: Proteobacteria/gamma
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 40 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Pseudomonas aeruginosa PAO1 4 2
Pseudomonas entomophila L48 3 3
Pseudomonas putida KT2440 3 3
Pseudomonas syringae pv. tomato str. DC3000
Pseudomonas fluorescens Pf-5 4 3
Pseudomonas mendocina ymp 4 2
Pseudomonas stutzeri A1501
Azotobacter vinelandii AvOP 2 2
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
hmp
*
Pseudomonas aeruginosa PAO1

Site:
position = -118
score = 4.988
sequence = TGCAGTCATTATGACCTAT

Site:
position = -163
score = 4.39231
sequence = GGTGGTCATTTCGACCTCT

Site:
position = -143
score = 5.24862
sequence = TGCAGTCCTAATGACTCTG

Gene: PA2664: Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase) (EC 1.14.12.17)
*
Pseudomonas entomophila L48

Site:
position = -164
score = 5.24268
sequence = TGCAGTCATATGGACTCCT

Site:
position = -145
score = 4.16508
sequence = GTTGGTCGGAATGACTATA

Site:
position = -119
score = 4.45606
sequence = GTGTGTCCTTATGACACCG

Gene: PSEEN0952: Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase) (EC 1.14.12.17)
*
Pseudomonas putida KT2440

Site:
position = -145
score = 4.52831
sequence = ATGGGTCGATATGACTATA

Site:
position = -164
score = 5.30459
sequence = TGTAGTCATATGGACTCCT

Gene: PP0808: Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase) (EC 1.14.12.17)
 
Pseudomonas syringae pv. tomato str. DC3000
*
Pseudomonas fluorescens Pf-5

Site:
position = -165
score = 5.86012
sequence = TGCAGTCATAATGACTCCA

Site:
position = -146
score = 5.31487
sequence = TGGTGTCTTAATGACTATA

Site:
position = -120
score = 4.89713
sequence = GAGTGTCTTTATGACTATA

Gene: PFL_5040: Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase) (EC 1.14.12.17)
*
Pseudomonas mendocina ymp

Site:
position = -156
score = 4.86507
sequence = GCGAGTCATTAAGACAACA

Site:
position = -201
score = 4.89668
sequence = AGCGGTCATTTCGACTACT

Site:
position = -182
score = 4.61013
sequence = CAAAGTCTTTATGACTCAC

Gene: Pmen_3580: Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase) (EC 1.14.12.17)
 
Pseudomonas stutzeri A1501

Gene: PST_3121: Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase) (EC 1.14.12.17)
*
Azotobacter vinelandii AvOP

Site:
position = -178
score = 4.27214
sequence = TGTAGTCATTCGGATAACG

Site:
position = -159
score = 4.99283
sequence = AGCAGTCTTATTGACAACG

Site:
position = -134
score = 4.98232
sequence = CGTAGTCGAAACGACTGCA

Gene: Avin_51090: Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase) (EC 1.14.12.17)
Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase) (EC 1.14.12.17)
PA2663
 
Pseudomonas aeruginosa PAO1

Gene: PA2663: hypothetical protein
 
Pseudomonas entomophila L48
 
Pseudomonas putida KT2440
 
Pseudomonas syringae pv. tomato str. DC3000
*
Pseudomonas fluorescens Pf-5

Site:
position = -157
score = 5.48587
sequence = TGCAGTCATATTGACTGCG

Site:
position = -136
score = 4.86475
sequence = GGCGGTCTTTATGACTTCT

Site:
position = -111
score = 4.74232
sequence = TCTGGTCATAAAGACTCTT

Gene: PFL_3310: hypothetical protein
 
Pseudomonas mendocina ymp

Gene: Pmen_3581: hypothetical protein
 
Pseudomonas stutzeri A1501

Gene: PST_3122: hypothetical protein
 
Azotobacter vinelandii AvOP
hypothetical protein
nnrS
 
Pseudomonas aeruginosa PAO1

Gene: PA2662: NnrS protein involved in response to NO
*
Pseudomonas entomophila L48

Site:
position = -140
score = 5.1195
sequence = GGAAGTCAATATGACAACA

Site:
position = -115
score = 4.97335
sequence = CAAGGTCATTATGACAACA

Gene: PSEEN3000: NnrS protein involved in response to NO
*
Pseudomonas putida KT2440

Site:
position = -140
score = 4.2274
sequence = GCCAGTCTGAATGACCGCA

Gene: PP2840: NnrS protein involved in response to NO
 
Pseudomonas syringae pv. tomato str. DC3000
 
Pseudomonas fluorescens Pf-5

Gene: PFL_3309: NnrS protein involved in response to NO
 
Pseudomonas mendocina ymp

Gene: Pmen_3582: NnrS protein involved in response to NO
 
Pseudomonas stutzeri A1501

Gene: PST_3544: NnrS protein involved in response to NO
 
Azotobacter vinelandii AvOP
NnrS protein involved in response to NO
 
CRON 2.
norR
*
Pseudomonas aeruginosa PAO1

Site:
position = -55
score = 4.988
sequence = ATAGGTCATAATGACTGCA

Site:
position = -10
score = 4.39231
sequence = AGAGGTCGAAATGACCACC

Site:
position = -30
score = 5.24862
sequence = CAGAGTCATTAGGACTGCA

Gene: PA2665: anaerobic nitric oxide reductase transcription regulator, Fis family
*
Pseudomonas entomophila L48

Site:
position = -55
score = 4.45606
sequence = CGGTGTCATAAGGACACAC

Site:
position = -10
score = 5.24268
sequence = AGGAGTCCATATGACTGCA

Site:
position = -29
score = 4.16508
sequence = TATAGTCATTCCGACCAAC

Gene: PSEEN0951: anaerobic nitric oxide reductase transcription regulator, Fis family
*
Pseudomonas putida KT2440

Site:
position = -29
score = 4.52831
sequence = TATAGTCATATCGACCCAT

Site:
position = -10
score = 5.30459
sequence = AGGAGTCCATATGACTACA

Gene: PP0807: anaerobic nitric oxide reductase transcription regulator, Fis family
 
Pseudomonas syringae pv. tomato str. DC3000
*
Pseudomonas fluorescens Pf-5

Site:
position = -10
score = 5.86012
sequence = TGGAGTCATTATGACTGCA

Site:
position = -55
score = 4.89713
sequence = TATAGTCATAAAGACACTC

Site:
position = -29
score = 5.31487
sequence = TATAGTCATTAAGACACCA

Gene: PFL_5041: anaerobic nitric oxide reductase transcription regulator, Fis family
*
Pseudomonas mendocina ymp

Site:
position = -55
score = 4.86507
sequence = TGTTGTCTTAATGACTCGC

Site:
position = -29
score = 4.61013
sequence = GTGAGTCATAAAGACTTTG

Site:
position = -10
score = 4.89668
sequence = AGTAGTCGAAATGACCGCT

Gene: Pmen_3579: anaerobic nitric oxide reductase transcription regulator, Fis family
 
Pseudomonas stutzeri A1501

Gene: PST_3516: anaerobic nitric oxide reductase transcription regulator, Fis family
*
Azotobacter vinelandii AvOP

Site:
position = -29
score = 4.99283
sequence = CGTTGTCAATAAGACTGCT

Site:
position = -54
score = 4.98232
sequence = TGCAGTCGTTTCGACTACG

Site:
position = -10
score = 4.27214
sequence = CGTTATCCGAATGACTACA

Gene: Avin_51080: anaerobic nitric oxide reductase transcription regulator, Fis family
anaerobic nitric oxide reductase transcription regulator, Fis family
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD