Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog NorR - Oceanospirillales/Alteromonadales

Properties
Regulator type: Transcription factor
Regulator family: Fis
Regulation mode: activator (repressor)
Biological process: Nitrosative stress response
Effector: Nitric oxide
Phylum: Proteobacteria/gamma
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 13 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Hahella chejuensis KCTC 2396 7 4
Marinobacter aqueolei
Marinobacter sp. ELB17
Oceanobacter sp. RED65
Oceanospirillum sp. MED92
Marinomonas sp. MWYL1 2 2
Saccharophagus degradans 2-40
Teredinibacter turnerae T7901 2 2
Cellvibrio japonicus Ueda107
Chromohalobacter salexigens DSM 3043 2 2
Reinekea sp. MED297
Alcanivorax borkumensis SK2
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
HCH_01372
*
Hahella chejuensis KCTC 2396

Site:
position = -158
score = 4.86364
sequence = ACATGTCTTTTTGACTCAT

Gene: HCH_01372: hypothetical protein
 
Marinobacter aqueolei
 
Marinobacter sp. ELB17
 
Oceanobacter sp. RED65
 
Oceanospirillum sp. MED92
 
Marinomonas sp. MWYL1
 
Saccharophagus degradans 2-40
 
Teredinibacter turnerae T7901
 
Cellvibrio japonicus Ueda107
 
Chromohalobacter salexigens DSM 3043
 
Reinekea sp. MED297
 
Alcanivorax borkumensis SK2
hypothetical protein
nnrS
 
Hahella chejuensis KCTC 2396

Gene: HCH_01371: NnrS protein involved in response to NO
 
Marinobacter aqueolei
 
Marinobacter sp. ELB17
 
Oceanobacter sp. RED65
 
Oceanospirillum sp. MED92
 
Marinomonas sp. MWYL1
 
Saccharophagus degradans 2-40
 
Teredinibacter turnerae T7901
 
Cellvibrio japonicus Ueda107
 
Chromohalobacter salexigens DSM 3043
 
Reinekea sp. MED297
 
Alcanivorax borkumensis SK2
NnrS protein involved in response to NO
hmp
 
Hahella chejuensis KCTC 2396

Gene: HCH_01369: Flavohemoprotein, nitric oxide dioxygenase
 
Marinobacter aqueolei
 
Marinobacter sp. ELB17
 
Oceanobacter sp. RED65
 
Oceanospirillum sp. MED92
*
Marinomonas sp. MWYL1

Site:
position = -178
score = 5.08448
sequence = TCGTGTCAATTTGACTCAA

Site:
position = -134
score = 4.80247
sequence = GTGAGTCTTATTGACTCTA

Gene: Mmwyl1_0066: Flavohemoprotein, nitric oxide dioxygenase
 
Saccharophagus degradans 2-40
*
Teredinibacter turnerae T7901

Site:
position = -207
score = 5.02068
sequence = CTGTGTCATAAAGACATCA

Gene: TERTU_0471: Flavohemoprotein, nitric oxide dioxygenase
 
Cellvibrio japonicus Ueda107
*
Chromohalobacter salexigens DSM 3043

Site:
position = -207
score = 4.62156
sequence = CGATGTCATTCTGACATCT

Gene: Csal_0452: Flavohemoprotein, nitric oxide dioxygenase
 
Reinekea sp. MED297
 
Alcanivorax borkumensis SK2

Gene: ABO_2119: Flavohemoprotein, nitric oxide dioxygenase
Flavohemoprotein, nitric oxide dioxygenase
 
CRON 2.
norA
*
Hahella chejuensis KCTC 2396

Site:
position = -138
score = 4.29125
sequence = AAGGGTTTTTATAACCCTA

Gene: HCH_00714: Nitric oxide-dependent regulator DnrN or NorA
 
Marinobacter aqueolei
 
Marinobacter sp. ELB17
 
Oceanobacter sp. RED65
 
Oceanospirillum sp. MED92
 
Marinomonas sp. MWYL1
 
Saccharophagus degradans 2-40
 
Teredinibacter turnerae T7901
 
Cellvibrio japonicus Ueda107
 
Chromohalobacter salexigens DSM 3043
 
Reinekea sp. MED297
 
Alcanivorax borkumensis SK2
Nitric oxide-dependent regulator DnrN or NorA
norB
 
Hahella chejuensis KCTC 2396

Gene: HCH_00713: Nitric-oxide reductase (EC 1.7.99.7), quinol-dependent
 
Marinobacter aqueolei
 
Marinobacter sp. ELB17
 
Oceanobacter sp. RED65
 
Oceanospirillum sp. MED92
 
Marinomonas sp. MWYL1
 
Saccharophagus degradans 2-40
 
Teredinibacter turnerae T7901
 
Cellvibrio japonicus Ueda107

Gene: CJA_1546: Nitric-oxide reductase (EC 1.7.99.7), quinol-dependent
 
Chromohalobacter salexigens DSM 3043
 
Reinekea sp. MED297
 
Alcanivorax borkumensis SK2
Nitric-oxide reductase (EC 1.7.99.7), quinol-dependent
 
CRON 3.
norR
*2
Hahella chejuensis KCTC 2396

Site:
position = -34
score = 4.86364
sequence = ATGAGTCAAAAAGACATGT

Site:
position = -15
score = 3.82984
sequence = AAGAGTTTATTTGATATGA

Gene: HCH_01373: anaerobic nitric oxide reductase transcription regulator, Fis family

Site:
position = -36
score = 4.29125
sequence = TAGGGTTATAAAAACCCTT

Gene: HCH_00715: anaerobic nitric oxide reductase transcription regulator, Fis family
 
Marinobacter aqueolei
 
Marinobacter sp. ELB17
 
Oceanobacter sp. RED65
 
Oceanospirillum sp. MED92
*
Marinomonas sp. MWYL1

Site:
position = -35
score = 4.80247
sequence = TAGAGTCAATAAGACTCAC

Site:
position = 9
score = 5.08448
sequence = TTGAGTCAAATTGACACGA

Gene: Mmwyl1_0067: anaerobic nitric oxide reductase transcription regulator, Fis family
 
Saccharophagus degradans 2-40
*
Teredinibacter turnerae T7901

Site:
position = -65
score = 5.02068
sequence = TGATGTCTTTATGACACAG

Gene: TERTU_0470: anaerobic nitric oxide reductase transcription regulator, Fis family
 
Cellvibrio japonicus Ueda107
*
Chromohalobacter salexigens DSM 3043

Site:
position = -63
score = 4.62156
sequence = AGATGTCAGAATGACATCG

Gene: Csal_0451: anaerobic nitric oxide reductase transcription regulator, Fis family
 
Reinekea sp. MED297
 
Alcanivorax borkumensis SK2
anaerobic nitric oxide reductase transcription regulator, Fis family
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulatory Sites [ FASTA format ] DOWNLOAD