Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog NorR - Alteromonadales

Properties
Regulator type: Transcription factor
Regulator family: Fis
Regulation mode: activator (repressor)
Biological process: Nitrosative stress response
Effector: Nitric oxide
Phylum: Proteobacteria/gamma
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 18 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Pseudoalteromonas atlantica T6c 4 2
Alteromonas macleodii 'Deep ecotype'
Glaciecola sp. HTCC2999
Colwellia psychrerythraea 34H 4 2
Alteromonadales bacterium TW-7
Pseudoalteromonas haloplanktis TAC125 4 2
Pseudoalteromonas tunicata D2 4 2
Idiomarina baltica OS145
Idiomarina loihiensis L2TR
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
norR
*
Pseudoalteromonas atlantica T6c

Site:
position = -93
score = 5.71011
sequence = ATGAGTCATAAAGACTCTA

Site:
position = -74
score = 5.41916
sequence = AAAAGTCTTTATGACTTGA

Site:
position = -118
score = 5.80628
sequence = AAGAGTCATATTGACTCTA

Gene: Patl_3475: anaerobic nitric oxide reductase transcription regulator, Fis family
 
Alteromonas macleodii 'Deep ecotype'
 
Glaciecola sp. HTCC2999
*
Colwellia psychrerythraea 34H

Site:
position = -117
score = 4.77636
sequence = CGTAGTCATTATGACCTTG

Site:
position = -92
score = 5.30179
sequence = TGTGGTCATAATGACTCTA

Gene: CPS_0851: anaerobic nitric oxide reductase transcription regulator, Fis family
 
Alteromonadales bacterium TW-7
*
Pseudoalteromonas haloplanktis TAC125

Site:
position = -15
score = 5.23063
sequence = AAGAGTCATTTTGACATGA

Site:
position = -58
score = 4.22577
sequence = TTATGTCTTTATGACCTAC

Gene: PSHAa2883: anaerobic nitric oxide reductase transcription regulator, Fis family
*
Pseudoalteromonas tunicata D2

Site:
position = -102
score = 5.71011
sequence = AAGAGTCTTAATGACTCAT

Site:
position = -58
score = 5.04803
sequence = ACGTGTCTTTTTGACTCAA

Gene: PTD2_10353: anaerobic nitric oxide reductase transcription regulator, Fis family
 
Idiomarina baltica OS145
 
Idiomarina loihiensis L2TR
anaerobic nitric oxide reductase transcription regulator, Fis family
 
CRON 2.
Patl_3474
*
Pseudoalteromonas atlantica T6c

Site:
position = -150
score = 5.80628
sequence = TAGAGTCAATATGACTCTT

Site:
position = -175
score = 5.71011
sequence = TAGAGTCTTTATGACTCAT

Site:
position = -194
score = 5.41916
sequence = TCAAGTCATAAAGACTTTT

Gene: Patl_3474: hypothetical protein
 
Alteromonas macleodii 'Deep ecotype'
 
Glaciecola sp. HTCC2999
*
Colwellia psychrerythraea 34H

Site:
position = -162
score = 5.30179
sequence = TAGAGTCATTATGACCACA

Site:
position = -137
score = 4.77636
sequence = CAAGGTCATAATGACTACG

Gene: CPS_0850: hypothetical protein
 
Alteromonadales bacterium TW-7
*
Pseudoalteromonas haloplanktis TAC125

Site:
position = -163
score = 5.23063
sequence = TCATGTCAAAATGACTCTT

Site:
position = -120
score = 4.22577
sequence = GTAGGTCATAAAGACATAA

Gene: PSHAa2882: hypothetical protein
*
Pseudoalteromonas tunicata D2

Site:
position = -123
score = 5.71011
sequence = ATGAGTCATTAAGACTCTT

Site:
position = -167
score = 5.04803
sequence = TTGAGTCAAAAAGACACGT

Gene: PTD2_10348: hypothetical protein
 
Idiomarina baltica OS145
 
Idiomarina loihiensis L2TR
hypothetical protein
nnrS
 
Pseudoalteromonas atlantica T6c

Gene: Patl_3473: heme and Cu protein, response to NO
 
Alteromonas macleodii 'Deep ecotype'
 
Glaciecola sp. HTCC2999
 
Colwellia psychrerythraea 34H

Gene: CPS_0849: heme and Cu protein, response to NO
 
Alteromonadales bacterium TW-7
 
Pseudoalteromonas haloplanktis TAC125

Gene: PSHAa2881: heme and Cu protein, response to NO
 
Pseudoalteromonas tunicata D2

Gene: PTD2_10343: heme and Cu protein, response to NO
 
Idiomarina baltica OS145
 
Idiomarina loihiensis L2TR
heme and Cu protein, response to NO
hmpA
 
Pseudoalteromonas atlantica T6c

Gene: Patl_3472: Flavohemoprotein, nitric oxide dioxygenase
 
Alteromonas macleodii 'Deep ecotype'
 
Glaciecola sp. HTCC2999
 
Colwellia psychrerythraea 34H

Gene: CPS_0848: Flavohemoprotein, nitric oxide dioxygenase
 
Alteromonadales bacterium TW-7
 
Pseudoalteromonas haloplanktis TAC125

Gene: PSHAa2880: Flavohemoprotein, nitric oxide dioxygenase
 
Pseudoalteromonas tunicata D2

Gene: PTD2_10338: Flavohemoprotein, nitric oxide dioxygenase
 
Idiomarina baltica OS145
 
Idiomarina loihiensis L2TR
Flavohemoprotein, nitric oxide dioxygenase
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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