Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog NorR - Vibrionales

Properties
Regulator type: Transcription factor
Regulator family: Fis
Regulation mode: activator (repressor)
Biological process: Nitrosative stress response
Effector: Nitric oxide
Phylum: Proteobacteria/gamma
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 40 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Vibrio cholerae O1 biovar eltor str. N16961 3 3
Vibrio vulnificus CMCP6 4 2
Vibrio harveyi ATCC BAA-1116
Vibrio parahaemolyticus RIMD 2210633
Vibrio shilonii AK1 6 4
Vibrio splendidus LGP32 7 5
Vibrio fischeri ES114 5 2
Vibrio salmonicida LFI1238 5 2
Vibrio angustum S14
Photobacterium profundum SS9
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
norR1
 
Vibrio cholerae O1 biovar eltor str. N16961
*
Vibrio vulnificus CMCP6

Site:
position = -32
score = 5.82823
sequence = AATTGTCATATTGACATTA

Site:
position = -52
score = 5.50033
sequence = TTTTGTCATTTAGACACTA

Site:
position = -76
score = 5.60306
sequence = CAGTGTCTAAATGACACTA

Gene: VV21342: anaerobic nitric oxide reductase transcription regulator, Fis family
 
Vibrio harveyi ATCC BAA-1116
 
Vibrio parahaemolyticus RIMD 2210633
*
Vibrio shilonii AK1

Site:
position = -32
score = 5.51684
sequence = AATTGTCATATTGACAAAG

Site:
position = -52
score = 5.13988
sequence = AGATGTCATTTAGACATTA

Site:
position = -76
score = 5.09883
sequence = AACTGTCTAAACGACACTG

Gene: VSAK1_23829: anaerobic nitric oxide reductase transcription regulator, Fis family
 
Vibrio splendidus LGP32
*
Vibrio fischeri ES114

Site:
position = -38
score = 5.35827
sequence = AATTGTCAAATTAACACTG

Site:
position = -83
score = 5.6093
sequence = AAGTGTCATTATGACAATC

Site:
position = -58
score = 5.37
sequence = TTTTGTCAAAACGACACTA

Gene: VF_1783: anaerobic nitric oxide reductase transcription regulator, Fis family
*
Vibrio salmonicida LFI1238

Site:
position = -39
score = 5.42653
sequence = AATAGTCAAATTGACATTA

Site:
position = -59
score = 5.2065
sequence = TTCTGTCAAAAAGACAGTA

Site:
position = -84
score = 5.64428
sequence = AAATGTCAATTTGACACTC

Gene: VSAL_I2198: anaerobic nitric oxide reductase transcription regulator, Fis family
 
Vibrio angustum S14
 
Photobacterium profundum SS9
anaerobic nitric oxide reductase transcription regulator, Fis family
 
CRON 2.
norV
 
Vibrio cholerae O1 biovar eltor str. N16961
*
Vibrio vulnificus CMCP6

Site:
position = -170
score = 5.50033
sequence = TAGTGTCTAAATGACAAAA

Site:
position = -190
score = 5.82823
sequence = TAATGTCAATATGACAATT

Site:
position = -146
score = 5.60306
sequence = TAGTGTCATTTAGACACTG

Gene: VV21343: Anaerobic nitric oxide reductase flavorubredoxin
 
Vibrio harveyi ATCC BAA-1116
 
Vibrio parahaemolyticus RIMD 2210633
*
Vibrio shilonii AK1

Site:
position = -138
score = 5.09883
sequence = CAGTGTCGTTTAGACAGTT

Site:
position = -162
score = 5.13988
sequence = TAATGTCTAAATGACATCT

Site:
position = -182
score = 5.51684
sequence = CTTTGTCAATATGACAATT

Gene: VSAK1_23834: Anaerobic nitric oxide reductase flavorubredoxin
*
Vibrio splendidus LGP32

Site:
position = -10
score = 4.75105
sequence = TATTATCATTATGACTATT

Site:
position = -168
score = 4.39182
sequence = CTGAGTCATAAAGACACCT

Gene: VS_II1439: Anaerobic nitric oxide reductase flavorubredoxin
*
Vibrio fischeri ES114

Site:
position = -123
score = 5.6093
sequence = GATTGTCATAATGACACTT

Site:
position = -148
score = 5.37
sequence = TAGTGTCGTTTTGACAAAA

Site:
position = -168
score = 5.35827
sequence = CAGTGTTAATTTGACAATT

Gene: VF_1782: Anaerobic nitric oxide reductase flavorubredoxin
*
Vibrio salmonicida LFI1238

Site:
position = -122
score = 5.64428
sequence = GAGTGTCAAATTGACATTT

Site:
position = -147
score = 5.2065
sequence = TACTGTCTTTTTGACAGAA

Site:
position = -167
score = 5.42653
sequence = TAATGTCAATTTGACTATT

Gene: VSAL_I2199: Anaerobic nitric oxide reductase flavorubredoxin
 
Vibrio angustum S14
 
Photobacterium profundum SS9

Gene: PBPRA1144: Anaerobic nitric oxide reductase flavorubredoxin
Anaerobic nitric oxide reductase flavorubredoxin
norW
 
Vibrio cholerae O1 biovar eltor str. N16961
 
Vibrio vulnificus CMCP6

Gene: VV21344: Nitric oxide reductase FlRd-NAD(+) reductase (EC 1.18.1.-)
 
Vibrio harveyi ATCC BAA-1116
 
Vibrio parahaemolyticus RIMD 2210633
 
Vibrio shilonii AK1

Gene: VSAK1_23839: Nitric oxide reductase FlRd-NAD(+) reductase (EC 1.18.1.-)
 
Vibrio splendidus LGP32

Gene: VS_II1440: Nitric oxide reductase FlRd-NAD(+) reductase (EC 1.18.1.-)
 
Vibrio fischeri ES114

Gene: VF_1781: Nitric oxide reductase FlRd-NAD(+) reductase (EC 1.18.1.-)
 
Vibrio salmonicida LFI1238

Gene: VSAL_I2200: Nitric oxide reductase FlRd-NAD(+) reductase (EC 1.18.1.-)
 
Vibrio angustum S14
 
Photobacterium profundum SS9

Gene: PBPRA1143: Nitric oxide reductase FlRd-NAD(+) reductase (EC 1.18.1.-)
Nitric oxide reductase FlRd-NAD(+) reductase (EC 1.18.1.-)
fpr
 
Vibrio cholerae O1 biovar eltor str. N16961
 
Vibrio vulnificus CMCP6

Gene: VV20962: Ferredoxin--NADP(+) reductase (EC 1.18.1.2)
 
Vibrio harveyi ATCC BAA-1116

Gene: VIBHAR_06648: Ferredoxin--NADP(+) reductase (EC 1.18.1.2)
 
Vibrio parahaemolyticus RIMD 2210633

Gene: VPA1586: Ferredoxin--NADP(+) reductase (EC 1.18.1.2)
 
Vibrio shilonii AK1

Gene: VSAK1_05610: Ferredoxin--NADP(+) reductase (EC 1.18.1.2)
*
Vibrio splendidus LGP32

Site:
position = -127
score = 4.96888
sequence = AGATGTCATTTAGACACAA

Site:
position = -103
score = 4.63283
sequence = CAAAGTCTATTTGACATCA

Gene: VS_II0152: Ferredoxin--NADP(+) reductase (EC 1.18.1.2)
 
Vibrio fischeri ES114

Gene: VF_1780: Ferredoxin--NADP(+) reductase (EC 1.18.1.2)
 
Vibrio salmonicida LFI1238

Gene: VSAL_I2201: Ferredoxin--NADP(+) reductase (EC 1.18.1.2)
 
Vibrio angustum S14

Gene: VAS14_21517: Ferredoxin--NADP(+) reductase (EC 1.18.1.2)
 
Photobacterium profundum SS9

Gene: PBPRA0238: Ferredoxin--NADP(+) reductase (EC 1.18.1.2)
Ferredoxin--NADP(+) reductase (EC 1.18.1.2)
tehB
 
Vibrio cholerae O1 biovar eltor str. N16961
 
Vibrio vulnificus CMCP6

Gene: VV21345: tellurite resistance protein B
 
Vibrio harveyi ATCC BAA-1116
 
Vibrio parahaemolyticus RIMD 2210633
*2
Vibrio shilonii AK1

Gene: VSAK1_23844: tellurite resistance protein B

Site:
position = -186
score = 4.18646
sequence = TGAGGTCGTTATGACACAA

Gene: VSAK1_17902: tellurite resistance protein B
 
Vibrio splendidus LGP32

Gene: VS_II0151: tellurite resistance protein B
 
Vibrio fischeri ES114

Gene: VF_1779: tellurite resistance protein B
 
Vibrio salmonicida LFI1238

Gene: VSAL_I2202: tellurite resistance protein B
 
Vibrio angustum S14
 
Photobacterium profundum SS9

Gene: PBPRA2631: tellurite resistance protein B
tellurite resistance protein B
 
CRON 3.
nnrS
*
Vibrio cholerae O1 biovar eltor str. N16961

Site:
position = -56
score = 4.89516
sequence = TGGTGTCATTATGACTTTT

Site:
position = -80
score = 4.26157
sequence = AAAAGTCATAATGACTCGA

Gene: VC2330: heme and Cu protein, response to NO
 
Vibrio vulnificus CMCP6

Gene: VV1_1781: heme and Cu protein, response to NO
 
Vibrio harveyi ATCC BAA-1116

Gene: VIBHAR_03317: heme and Cu protein, response to NO
 
Vibrio parahaemolyticus RIMD 2210633

Gene: VP2390: heme and Cu protein, response to NO
 
Vibrio shilonii AK1

Gene: VSAK1_10668: heme and Cu protein, response to NO
*
Vibrio splendidus LGP32

Site:
position = -187
score = 4.82609
sequence = GTGTGTTTAATTGACACTT

Gene: VS_2426: heme and Cu protein, response to NO
 
Vibrio fischeri ES114

Gene: VF_A0439: heme and Cu protein, response to NO
 
Vibrio salmonicida LFI1238

Gene: VSAL_II0720: heme and Cu protein, response to NO
 
Vibrio angustum S14

Gene: VAS14_11974: heme and Cu protein, response to NO
 
Photobacterium profundum SS9

Gene: PBPRB0907: heme and Cu protein, response to NO
heme and Cu protein, response to NO
 
CRON 4.
hmp
*
Vibrio cholerae O1 biovar eltor str. N16961

Site:
position = -157
score = 5.06408
sequence = TAGTGTCAAATCGACACGA

Gene: VCA0183: Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase) (EC 1.14.12.17)
 
Vibrio vulnificus CMCP6

Gene: VV1_1301: Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase) (EC 1.14.12.17)
 
Vibrio harveyi ATCC BAA-1116

Gene: VIBHAR_00087: Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase) (EC 1.14.12.17)
 
Vibrio parahaemolyticus RIMD 2210633

Gene: VP2809: Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase) (EC 1.14.12.17)
 
Vibrio shilonii AK1

Gene: VSAK1_23194: Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase) (EC 1.14.12.17)
*
Vibrio splendidus LGP32

Site:
position = -52
score = 4.5808
sequence = ATTAGTCAATTTGACATGA

Site:
position = -193
score = 4.4739
sequence = TGTTGTCTATATGACTGAA

Gene: VS_II0564: Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase) (EC 1.14.12.17)
 
Vibrio fischeri ES114

Gene: VF_2316: Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase) (EC 1.14.12.17)
 
Vibrio salmonicida LFI1238

Gene: VSAL_I2770: Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase) (EC 1.14.12.17)
 
Vibrio angustum S14

Gene: VAS14_18799: Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase) (EC 1.14.12.17)
 
Photobacterium profundum SS9
Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase) (EC 1.14.12.17)
 
CRON 5.
norR2
*
Vibrio cholerae O1 biovar eltor str. N16961

Site:
position = -52
score = 5.06408
sequence = TCGTGTCGATTTGACACTA

Gene: VCA0182: anaerobic nitric oxide reductase transcription regulator, Fis family
 
Vibrio vulnificus CMCP6
 
Vibrio harveyi ATCC BAA-1116
 
Vibrio parahaemolyticus RIMD 2210633
*
Vibrio shilonii AK1

Site:
position = -59
score = 4.53131
sequence = TTAGGTCAATATGACTCTA

Gene: VSAK1_23189: anaerobic nitric oxide reductase transcription regulator, Fis family
*
Vibrio splendidus LGP32

Site:
position = -53
score = 4.91939
sequence = TTATGTCATAAAGACTCTA

Site:
position = -75
score = 4.30432
sequence = TTTAGTCAAAAAGACCTTT

Site:
position = -175
score = 4.4739
sequence = TTCAGTCATATAGACAACA

Gene: VS_II0563: anaerobic nitric oxide reductase transcription regulator, Fis family
 
Vibrio fischeri ES114
 
Vibrio salmonicida LFI1238
 
Vibrio angustum S14
 
Photobacterium profundum SS9
anaerobic nitric oxide reductase transcription regulator, Fis family
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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