Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog LldR - Various betaproteobacteria

Properties
Regulator type: Transcription factor
Regulator family: GntR/Others
Regulation mode: repressor
Biological process: Lactate utilization
Effector: L-lactate
Phylum: Proteobacteria/beta
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 15 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Azoarcus sp. EbN1
Thauera sp. MZ1T 4 1
Dechloromonas aromatica RCB 5 2
Nitrosomonas europaea ATCC 19718
Nitrosospira multiformis ATCC 25196
Thiobacillus denitrificans
Chromobacterium violaceum ATCC 12472 6 2
Neisseria meningitidis MC58 3 3
Laribacter hongkongensis HLHK9 6 2
Methylobacillus flagellatus KT
Methylotenera mobilis JLW8
Methylophilales bacterium HTCC2181
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
lldP2
 
Azoarcus sp. EbN1
 
Thauera sp. MZ1T
 
Dechloromonas aromatica RCB
 
Nitrosomonas europaea ATCC 19718
 
Nitrosospira multiformis ATCC 25196
 
Thiobacillus denitrificans
 
Chromobacterium violaceum ATCC 12472
*
Neisseria meningitidis MC58

Site:
position = -110
score = 6.34746
sequence = AATTGGTCTTACCAATT

Gene: NMB0543: L-lactate permease
 
Laribacter hongkongensis HLHK9
 
Methylobacillus flagellatus KT
 
Methylotenera mobilis JLW8
 
Methylophilales bacterium HTCC2181
L-lactate permease
 
CRON 2.
lldE
 
Azoarcus sp. EbN1
 
Thauera sp. MZ1T

Gene: Tmz1t_1715: L-lactate dehydrogenase, Fe-S oxidoreductase subunit LldE
*
Dechloromonas aromatica RCB

Site:
position = -47
score = 5.99053
sequence = TATTGGTCTTACCAATT

Site:
position = -160
score = 4.04757
sequence = GATTGGTAAGACCAGCA

Site:
position = -178
score = 4.24161
sequence = CATTGGTAAGACCACAT

Gene: Daro_1766: L-lactate dehydrogenase, Fe-S oxidoreductase subunit LldE
 
Nitrosomonas europaea ATCC 19718
 
Nitrosospira multiformis ATCC 25196
 
Thiobacillus denitrificans
*
Chromobacterium violaceum ATCC 12472

Site:
position = -30
score = 6.34746
sequence = AATTGGTCTTACCAATT

Gene: CV3030: L-lactate dehydrogenase, Fe-S oxidoreductase subunit LldE
 
Neisseria meningitidis MC58

Gene: NMB1436: L-lactate dehydrogenase, Fe-S oxidoreductase subunit LldE
*
Laribacter hongkongensis HLHK9

Site:
position = -36
score = 6.19238
sequence = AATTGGCCTGACCAATT

Gene: LHK_02843: L-lactate dehydrogenase, Fe-S oxidoreductase subunit LldE
 
Methylobacillus flagellatus KT
 
Methylotenera mobilis JLW8
 
Methylophilales bacterium HTCC2181
L-lactate dehydrogenase, Fe-S oxidoreductase subunit LldE
lldG
 
Azoarcus sp. EbN1
 
Thauera sp. MZ1T

Gene: Tmz1t_1717: L-lactate dehydrogenase, subunit LldG
 
Dechloromonas aromatica RCB

Gene: Daro_1765: L-lactate dehydrogenase, subunit LldG
 
Nitrosomonas europaea ATCC 19718
 
Nitrosospira multiformis ATCC 25196
 
Thiobacillus denitrificans
 
Chromobacterium violaceum ATCC 12472

Gene: CV3029: L-lactate dehydrogenase, subunit LldG
 
Neisseria meningitidis MC58

Gene: NMB1437: L-lactate dehydrogenase, subunit LldG
 
Laribacter hongkongensis HLHK9

Gene: LHK_02844: L-lactate dehydrogenase, subunit LldG
 
Methylobacillus flagellatus KT
 
Methylotenera mobilis JLW8
 
Methylophilales bacterium HTCC2181
L-lactate dehydrogenase, subunit LldG
lldF
 
Azoarcus sp. EbN1
 
Thauera sp. MZ1T

Gene: Tmz1t_1716: L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit LldF
 
Dechloromonas aromatica RCB

Gene: Daro_1764: L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit LldF
 
Nitrosomonas europaea ATCC 19718
 
Nitrosospira multiformis ATCC 25196
 
Thiobacillus denitrificans
 
Chromobacterium violaceum ATCC 12472

Gene: CV3028: L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit LldF
 
Neisseria meningitidis MC58

Gene: NMB1438: L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit LldF
 
Laribacter hongkongensis HLHK9

Gene: LHK_02845: L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit LldF
 
Methylobacillus flagellatus KT
 
Methylotenera mobilis JLW8
 
Methylophilales bacterium HTCC2181
L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit LldF
dld
 
Azoarcus sp. EbN1
 
Thauera sp. MZ1T
 
Dechloromonas aromatica RCB

Gene: Daro_1763: D-lactate dehydrogenase
 
Nitrosomonas europaea ATCC 19718
 
Nitrosospira multiformis ATCC 25196
 
Thiobacillus denitrificans
 
Chromobacterium violaceum ATCC 12472

Gene: CV3027: D-lactate dehydrogenase
 
Neisseria meningitidis MC58
 2
Laribacter hongkongensis HLHK9

Gene: LHK_02847: D-lactate dehydrogenase

Gene: LHK_02846: D-lactate dehydrogenase
 
Methylobacillus flagellatus KT
 
Methylotenera mobilis JLW8
 
Methylophilales bacterium HTCC2181
D-lactate dehydrogenase
lldP
 
Azoarcus sp. EbN1
*
Thauera sp. MZ1T

Site:
position = -147
score = 4.59854
sequence = AAGTGGTAAGACCACTT

Gene: Tmz1t_1714: L-lactate permease
 
Dechloromonas aromatica RCB
 
Nitrosomonas europaea ATCC 19718
 
Nitrosospira multiformis ATCC 25196
 
Thiobacillus denitrificans
 
Chromobacterium violaceum ATCC 12472

Gene: CV3026: L-lactate permease
 
Neisseria meningitidis MC58
 
Laribacter hongkongensis HLHK9
 
Methylobacillus flagellatus KT
 
Methylotenera mobilis JLW8
 
Methylophilales bacterium HTCC2181
L-lactate permease
 
CRON 3.
lldR
 
Azoarcus sp. EbN1
 
Thauera sp. MZ1T

Gene: Tmz1t_1705: Lactate-responsive regulator LldR, GntR family
*
Dechloromonas aromatica RCB

Site:
position = -32
score = 4.7556
sequence = TGCTGGTCTTACCAATC

Site:
position = -145
score = 5.48746
sequence = AATTGGTAAGACCAATA

Site:
position = -14
score = 4.53973
sequence = ATGTGGTCTTACCAATG

Gene: Daro_1767: Lactate-responsive regulator LldR, GntR family
 
Nitrosomonas europaea ATCC 19718
 
Nitrosospira multiformis ATCC 25196
 
Thiobacillus denitrificans
*
Chromobacterium violaceum ATCC 12472

Site:
position = -27
score = 4.43209
sequence = ATCCGGTCAGACCAATT

Gene: CV3037: Lactate-responsive regulator LldR, GntR family
*
Neisseria meningitidis MC58

Site:
position = -226
score = 5.29394
sequence = GATTGGTCAGTCCAATT

Gene: NMB1711: Lactate-responsive regulator LldR, GntR family
*
Laribacter hongkongensis HLHK9

Site:
position = -229
score = 5.69295
sequence = AATTGGTCAGGCCAATT

Gene: LHK_02842: Lactate-responsive regulator LldR, GntR family
 
Methylobacillus flagellatus KT
 
Methylotenera mobilis JLW8
 
Methylophilales bacterium HTCC2181
Lactate-responsive regulator LldR, GntR family
 
CRON 4.
lldP
 
Azoarcus sp. EbN1
 
Thauera sp. MZ1T
 
Dechloromonas aromatica RCB
 
Nitrosomonas europaea ATCC 19718
 
Nitrosospira multiformis ATCC 25196
 
Thiobacillus denitrificans
 
Chromobacterium violaceum ATCC 12472
*
Neisseria meningitidis MC58

Site:
position = 15
score = 5.14005
sequence = AATTGGTTTGACCACTA

Site:
position = -221
score = 5.83545
sequence = AATTGGACTGACCAATC

Gene: NMB1712: L-lactate permease
 
Laribacter hongkongensis HLHK9
 
Methylobacillus flagellatus KT
 
Methylotenera mobilis JLW8
 
Methylophilales bacterium HTCC2181
L-lactate permease
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD