Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog LldR - Xanthomonadales

Properties
Regulator type: Transcription factor
Regulator family: GntR/Others
Regulation mode: repressor
Biological process: Lactate utilization
Effector: L-lactate
Phylum: Proteobacteria/gamma
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 2 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Xylella fastidiosa 9a5c
Xanthomonas axonopodis pv. citri str. 306
Xanthomonas campestris pv. campestris str. ATCC 33913
Stenotrophomonas maltophilia K279a 4 1
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
lldP
 
Xylella fastidiosa 9a5c
 
Xanthomonas axonopodis pv. citri str. 306
 
Xanthomonas campestris pv. campestris str. ATCC 33913
*
Stenotrophomonas maltophilia K279a

Site:
position = -81
score = 5.34211
sequence = TATTGGTACGACCAATA

Site:
position = -178
score = 5.22897
sequence = AAATGGTCGGACCAATA

Gene: Smlt2910: L-lactate permease
L-lactate permease
lldR
 
Xylella fastidiosa 9a5c
 
Xanthomonas axonopodis pv. citri str. 306
 
Xanthomonas campestris pv. campestris str. ATCC 33913
 
Stenotrophomonas maltophilia K279a

Gene: Smlt2909: Lactate-responsive regulator LldR, GntR family
Lactate-responsive regulator LldR, GntR family
lldD
 
Xylella fastidiosa 9a5c
 
Xanthomonas axonopodis pv. citri str. 306

Gene: XAC0133: L-lactate dehydrogenase (EC 1.1.2.3)
 
Xanthomonas campestris pv. campestris str. ATCC 33913

Gene: XCC0106: L-lactate dehydrogenase (EC 1.1.2.3)
 
Stenotrophomonas maltophilia K279a

Gene: Smlt2908: L-lactate dehydrogenase (EC 1.1.2.3)
L-lactate dehydrogenase (EC 1.1.2.3)
dld
 
Xylella fastidiosa 9a5c
 
Xanthomonas axonopodis pv. citri str. 306
 
Xanthomonas campestris pv. campestris str. ATCC 33913
 
Stenotrophomonas maltophilia K279a

Gene: Smlt2907: D-lactate dehydrogenase
D-lactate dehydrogenase
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD