Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog LldR - Pseudomonadaceae

Properties
Regulator type: Transcription factor
Regulator family: GntR/Others
Regulation mode: repressor
Biological process: Lactate utilization
Effector: L-lactate
Phylum: Proteobacteria/gamma
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 20 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Pseudomonas aeruginosa PAO1 4 2
Pseudomonas entomophila L48 4 2
Pseudomonas putida KT2440 4 2
Pseudomonas syringae pv. tomato str. DC3000
Pseudomonas fluorescens Pf-5 6 2
Pseudomonas mendocina ymp 4 2
Pseudomonas stutzeri A1501 6 2
Azotobacter vinelandii AvOP 6 2
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
lldR
*
Pseudomonas aeruginosa PAO1

Site:
position = -219
score = 6.09612
sequence = AATTGGTAAGACCAATT

Gene: PA4769: Lactate-responsive regulator LldR in Enterobacteria, GntR family
*
Pseudomonas entomophila L48

Site:
position = -291
score = 6.09612
sequence = AATTGGTAAGACCAATT

Gene: PSEEN0769: Lactate-responsive regulator LldR in Enterobacteria, GntR family
*
Pseudomonas putida KT2440

Site:
position = -211
score = 6.09612
sequence = AATTGGTAAGACCAATT

Gene: PP4734: Lactate-responsive regulator LldR in Enterobacteria, GntR family
 
Pseudomonas syringae pv. tomato str. DC3000
*
Pseudomonas fluorescens Pf-5

Site:
position = -210
score = 6.09612
sequence = AATTGGTAAGACCAATT

Gene: PFL_0818: Lactate-responsive regulator LldR in Enterobacteria, GntR family
*
Pseudomonas mendocina ymp

Site:
position = -29
score = 3.94256
sequence = GTCTGGTCAAACCAATG

Site:
position = -175
score = 6.26356
sequence = AATTGGTAATACCAATT

Gene: Pmen_3633: Lactate-responsive regulator LldR in Enterobacteria, GntR family
*
Pseudomonas stutzeri A1501

Site:
position = -161
score = 5.51009
sequence = AAGTGGTAAGACCAATT

Site:
position = -28
score = 4.49074
sequence = GACTGGTAAGACCATTT

Gene: PST_3335: Lactate-responsive regulator LldR in Enterobacteria, GntR family
*
Azotobacter vinelandii AvOP

Site:
position = -222
score = 6.26356
sequence = AATTGGTAATACCAATT

Site:
position = -42
score = 4.111
sequence = AACTGGTCAAGCCAGTA

Gene: Avin_43060: Lactate-responsive regulator LldR in Enterobacteria, GntR family
Lactate-responsive regulator LldR in Enterobacteria, GntR family
 
CRON 2.
lldP
*
Pseudomonas aeruginosa PAO1

Site:
position = -126
score = 6.47528
sequence = AATTGGTCTTACCAATT

Gene: PA4770: L-lactate permease
*
Pseudomonas entomophila L48

Site:
position = -63
score = 6.47528
sequence = AATTGGTCTTACCAATT

Gene: PSEEN0768: L-lactate permease
*
Pseudomonas putida KT2440

Site:
position = -62
score = 6.47528
sequence = AATTGGTCTTACCAATT

Gene: PP4735: L-lactate permease
 
Pseudomonas syringae pv. tomato str. DC3000
*
Pseudomonas fluorescens Pf-5

Site:
position = -68
score = 6.47528
sequence = AATTGGTCTTACCAATT

Gene: PFL_0817: L-lactate permease
*
Pseudomonas mendocina ymp

Site:
position = -139
score = 6.37314
sequence = AATTGGTATTACCAATT

Site:
position = -285
score = 3.60093
sequence = CATTGGTTTGACCAGAC

Gene: Pmen_3634: L-lactate permease
*
Pseudomonas stutzeri A1501

Site:
position = -125
score = 5.86737
sequence = AATTGGTCTTACCACTT

Site:
position = -258
score = 5.17052
sequence = AAATGGTCTTACCAGTC

Gene: PST_3336: L-lactate permease
*
Azotobacter vinelandii AvOP

Site:
position = -149
score = 6.37314
sequence = AATTGGTATTACCAATT

Site:
position = -329
score = 4.02328
sequence = TACTGGCTTGACCAGTT

Gene: Avin_43070: L-lactate permease
L-lactate permease
lldE
 
Pseudomonas aeruginosa PAO1
 
Pseudomonas entomophila L48
 
Pseudomonas putida KT2440
 
Pseudomonas syringae pv. tomato str. DC3000
 
Pseudomonas fluorescens Pf-5

Gene: PFL_0816: L-lactate dehydrogenase, Fe-S oxidoreductase subunit LldE
 
Pseudomonas mendocina ymp
 
Pseudomonas stutzeri A1501

Gene: PST_3337: L-lactate dehydrogenase, Fe-S oxidoreductase subunit LldE
 
Azotobacter vinelandii AvOP

Gene: Avin_43080: L-lactate dehydrogenase, Fe-S oxidoreductase subunit LldE
L-lactate dehydrogenase, Fe-S oxidoreductase subunit LldE
lldF
 
Pseudomonas aeruginosa PAO1
 
Pseudomonas entomophila L48
 
Pseudomonas putida KT2440
 
Pseudomonas syringae pv. tomato str. DC3000
 
Pseudomonas fluorescens Pf-5

Gene: PFL_0815: L-lactate dehydrogenase, iron-sulfur cluster-binding subunit LldF
 
Pseudomonas mendocina ymp
 
Pseudomonas stutzeri A1501

Gene: PST_3338: L-lactate dehydrogenase, iron-sulfur cluster-binding subunit LldF
 
Azotobacter vinelandii AvOP

Gene: Avin_43090: L-lactate dehydrogenase, iron-sulfur cluster-binding subunit LldF
L-lactate dehydrogenase, iron-sulfur cluster-binding subunit LldF
lldG
 
Pseudomonas aeruginosa PAO1
 
Pseudomonas entomophila L48
 
Pseudomonas putida KT2440
 
Pseudomonas syringae pv. tomato str. DC3000
 
Pseudomonas fluorescens Pf-5

Gene: PFL_0814: L-lactate dehydrogenase, subunit LldG
 
Pseudomonas mendocina ymp
 
Pseudomonas stutzeri A1501

Gene: PST_3339: L-lactate dehydrogenase, subunit LldG
 
Azotobacter vinelandii AvOP

Gene: Avin_43100: L-lactate dehydrogenase, subunit LldG
L-lactate dehydrogenase, subunit LldG
dld
 
Pseudomonas aeruginosa PAO1

Gene: PA4772: D-Lactate dehydrogenase (EC 1.1.2.5)
 
Pseudomonas entomophila L48

Gene: PSEEN0766: D-Lactate dehydrogenase (EC 1.1.2.5)
 
Pseudomonas putida KT2440

Gene: PP4737: D-Lactate dehydrogenase (EC 1.1.2.5)
 
Pseudomonas syringae pv. tomato str. DC3000
 
Pseudomonas fluorescens Pf-5

Gene: PFL_0813: D-Lactate dehydrogenase (EC 1.1.2.5)
 
Pseudomonas mendocina ymp

Gene: Pmen_3636: D-Lactate dehydrogenase (EC 1.1.2.5)
 
Pseudomonas stutzeri A1501

Gene: PST_3340: D-Lactate dehydrogenase (EC 1.1.2.5)
 
Azotobacter vinelandii AvOP

Gene: Avin_43110: D-Lactate dehydrogenase (EC 1.1.2.5)
D-Lactate dehydrogenase (EC 1.1.2.5)
lldD
 
Pseudomonas aeruginosa PAO1

Gene: PA4771: L-lactate dehydrogenase (EC 1.1.2.3)
 
Pseudomonas entomophila L48

Gene: PSEEN0767: L-lactate dehydrogenase (EC 1.1.2.3)
 
Pseudomonas putida KT2440

Gene: PP4736: L-lactate dehydrogenase (EC 1.1.2.3)
 
Pseudomonas syringae pv. tomato str. DC3000
 
Pseudomonas fluorescens Pf-5
 
Pseudomonas mendocina ymp

Gene: Pmen_3635: L-lactate dehydrogenase (EC 1.1.2.3)
 
Pseudomonas stutzeri A1501
 
Azotobacter vinelandii AvOP
L-lactate dehydrogenase (EC 1.1.2.3)
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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