Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog LldR - Ralstonia

Properties
Regulator type: Transcription factor
Regulator family: GntR/Others
Regulation mode: repressor
Biological process: Lactate utilization
Effector: L-lactate
Phylum: Proteobacteria/beta
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 8 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Ralstonia solanacearum GMI1000
Ralstonia pickettii 12J
Ralstonia metallidurans CH34 5 2
Ralstonia eutropha JMP134 5 2
Ralstonia eutropha H16 5 2
Cupriavidus taiwanensis 4 2
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
lldR
 
Ralstonia solanacearum GMI1000
 
Ralstonia pickettii 12J
*
Ralstonia metallidurans CH34

Site:
position = -48
score = 5.31187
sequence = AATTGGTTGGACCAGTT

Gene: Rmet_5900: Lactate-responsive regulator LldR, GntR family
*
Ralstonia eutropha JMP134

Site:
position = -64
score = 5.9423
sequence = AATTGGTTGGACCAATT

Gene: Reut_B5449: Lactate-responsive regulator LldR, GntR family
*
Ralstonia eutropha H16

Site:
position = -113
score = 5.74826
sequence = AATTGGTTGGACCAATC

Gene: H16_B0094: Lactate-responsive regulator LldR, GntR family
*
Cupriavidus taiwanensis

Site:
position = -59
score = 6.20132
sequence = AATTGGTCGGACCAATT

Gene: RALTA_B0086: Lactate-responsive regulator LldR, GntR family
Lactate-responsive regulator LldR, GntR family
 
CRON 2.
lldE
 
Ralstonia solanacearum GMI1000
 
Ralstonia pickettii 12J
*
Ralstonia metallidurans CH34

Site:
position = -106
score = 5.86556
sequence = AACTGGTCCAACCAATT

Gene: Rmet_5899: L-lactate dehydrogenase, Fe-S oxidoreductase subunit
*
Ralstonia eutropha JMP134

Site:
position = -85
score = 6.27602
sequence = AATTGGTCCAACCAATT

Gene: Reut_B5448: L-lactate dehydrogenase, Fe-S oxidoreductase subunit
*
Ralstonia eutropha H16

Site:
position = -84
score = 6.08197
sequence = GATTGGTCCAACCAATT

Gene: H16_B0093: L-lactate dehydrogenase, Fe-S oxidoreductase subunit
*
Cupriavidus taiwanensis

Site:
position = -83
score = 6.31498
sequence = AATTGGTCCGACCAATT

Gene: RALTA_B0085: L-lactate dehydrogenase, Fe-S oxidoreductase subunit
L-lactate dehydrogenase, Fe-S oxidoreductase subunit
lldG
 
Ralstonia solanacearum GMI1000
 
Ralstonia pickettii 12J
 
Ralstonia metallidurans CH34

Gene: Rmet_5898: L-lactate dehydrogenase, subunit LldG
 
Ralstonia eutropha JMP134

Gene: Reut_B5447: L-lactate dehydrogenase, subunit LldG
 
Ralstonia eutropha H16

Gene: H16_B0092: L-lactate dehydrogenase, subunit LldG
 
Cupriavidus taiwanensis

Gene: RALTA_B0084: L-lactate dehydrogenase, subunit LldG
L-lactate dehydrogenase, subunit LldG
lldF
 
Ralstonia solanacearum GMI1000
 
Ralstonia pickettii 12J
 
Ralstonia metallidurans CH34

Gene: Rmet_5897: L-lactate dehydrogenase, iron-sulfur cluster-binding subunit
 
Ralstonia eutropha JMP134

Gene: Reut_B5446: L-lactate dehydrogenase, iron-sulfur cluster-binding subunit
 
Ralstonia eutropha H16

Gene: H16_B0091: L-lactate dehydrogenase, iron-sulfur cluster-binding subunit
 
Cupriavidus taiwanensis

Gene: RALTA_B0083: L-lactate dehydrogenase, iron-sulfur cluster-binding subunit
L-lactate dehydrogenase, iron-sulfur cluster-binding subunit
lldP
 
Ralstonia solanacearum GMI1000
 
Ralstonia pickettii 12J
 
Ralstonia metallidurans CH34

Gene: Rmet_5896: L-lactate permease
 
Ralstonia eutropha JMP134

Gene: Reut_B5445: L-lactate permease
 
Ralstonia eutropha H16

Gene: H16_B0090: L-lactate permease
 
Cupriavidus taiwanensis

Gene: RALTA_B0082: L-lactate permease
L-lactate permease
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD