Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog FadR - Pasteurellales

Properties
Regulator type: Transcription factor
Regulator family: GntR/Others
Regulation mode: repressor (activator)
Biological process: Fatty acid degradation
Effector: Palmitoyl-CoA; Oleoyl-CoA
Phylum: Proteobacteria/gamma
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 17 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Haemophilus influenzae Rd KW20 1 1
Aggregatibacter aphrophilus NJ8700 3 2
Pasteurella multocida subsp. multocida str. Pm70 2 2
Mannheimia succiniciproducens MBEL55E 2 2
Actinobacillus succinogenes 130Z 2 2
Haemophilus somnus 2336 4 3
Actinobacillus pleuropneumoniae serovar 7 str. AP76 2 2
Haemophilus ducreyi 35000HP 2 2
Haemophilus parasuis SH0165 1 1
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
fadL
 
Haemophilus influenzae Rd KW20

Gene: HI0401: Long-chain fatty acid transport protein
*2
Aggregatibacter aphrophilus NJ8700

Gene: NT05HA_0159: Long-chain fatty acid transport protein

Site:
position = -64
score = 5.60327
sequence = TACTGGTCCGAACACTT

Gene: NT05HA_0160: Long-chain fatty acid transport protein
*
Pasteurella multocida subsp. multocida str. Pm70

Site:
position = -84
score = 6.24047
sequence = GACTGGTCTGAACTCTT

Gene: PM1069: Long-chain fatty acid transport protein
*
Mannheimia succiniciproducens MBEL55E

Site:
position = -120
score = 6.24047
sequence = TACTGGTCTGAACTCTT

Gene: MS0638: Long-chain fatty acid transport protein
*
Actinobacillus succinogenes 130Z

Site:
position = -108
score = 5.62728
sequence = AACTGGTCGGATCAGCT

Gene: Asuc_1905: Long-chain fatty acid transport protein
*4
Haemophilus somnus 2336

Site:
position = -105
score = 5.98312
sequence = AACTGATCTGACCTCTT

Gene: HSM_0477: Long-chain fatty acid transport protein

Gene: HSM_0476: Long-chain fatty acid transport protein

Site:
position = -163
score = 4.5412
sequence = TACTAATCCGACCACTT

Gene: HSM_1266: Long-chain fatty acid transport protein

Gene: HSM_0341: Long-chain fatty acid transport protein
*
Actinobacillus pleuropneumoniae serovar 7 str. AP76

Site:
position = -163
score = 5.78307
sequence = TACTGGTCGGAACTCCT

Gene: APP7_0991: Long-chain fatty acid transport protein
*
Haemophilus ducreyi 35000HP

Site:
position = -156
score = 5.6358
sequence = GACTGGTCTGAACTCTA

Gene: HD1078: Long-chain fatty acid transport protein
*
Haemophilus parasuis SH0165

Site:
position = -142
score = 5.30056
sequence = GACTGGTCGGAACTGTG

Gene: HAPS_0037: Long-chain fatty acid transport protein
Long-chain fatty acid transport protein
 
CRON 2.
fabA
*
Haemophilus influenzae Rd KW20

Site:
position = -114
score = 4.16135
sequence = GACTGCTCCGACAAGTT

Gene: HI1325: 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase (EC 4.2.1.60)
*
Aggregatibacter aphrophilus NJ8700

Site:
position = -119
score = 4.96531
sequence = AACTGATCGGACAAGTT

Gene: NT05HA_0871: 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase (EC 4.2.1.60)
*
Pasteurella multocida subsp. multocida str. Pm70

Site:
position = -116
score = 4.3614
sequence = AACTGCTCCGATAAGTT

Gene: PM0484: 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase (EC 4.2.1.60)
*
Mannheimia succiniciproducens MBEL55E

Site:
position = -130
score = 6.08469
sequence = AACTGGTCTGAACAGAT

Gene: MS1194: 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase (EC 4.2.1.60)
*
Actinobacillus succinogenes 130Z

Site:
position = -125
score = 4.4966
sequence = AACTGGTTAGACCAATT

Gene: Asuc_1443: 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase (EC 4.2.1.60)
*
Haemophilus somnus 2336

Site:
position = -212
score = 4.16135
sequence = GACTGCTCCGATAAGTT

Gene: HSM_1385: 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase (EC 4.2.1.60)
*
Actinobacillus pleuropneumoniae serovar 7 str. AP76

Site:
position = -116
score = 4.16135
sequence = CACTGATCCGACAAGTT

Gene: APP7_1976: 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase (EC 4.2.1.60)
*
Haemophilus ducreyi 35000HP

Site:
position = -116
score = 4.84315
sequence = AACTGATCGGATTTGCT

Gene: HD0181: 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase (EC 4.2.1.60)
 
Haemophilus parasuis SH0165

Gene: HAPS_2242: 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase (EC 4.2.1.60)
3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase (EC 4.2.1.60)
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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