Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog PdhR - Oceanospirillales/Alteromonadales

Properties
Regulator type: Transcription factor
Regulator family: GntR/Others
Regulation mode: repressor
Biological process: Pyruvate metabolism
Effector: Pyruvate
Phylum: Proteobacteria/gamma
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 3 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Hahella chejuensis KCTC 2396 3 1
Marinobacter aqueolei
Marinobacter sp. ELB17
Oceanobacter sp. RED65
Oceanospirillum sp. MED92 3 1
Marinomonas sp. MWYL1
Saccharophagus degradans 2-40
Teredinibacter turnerae T7901
Cellvibrio japonicus Ueda107
Chromohalobacter salexigens DSM 3043
Reinekea sp. MED297
Alcanivorax borkumensis SK2
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
pdhR
*
Hahella chejuensis KCTC 2396

Site:
position = -305
score = 6.10442
sequence = ATTGGTCATACCAGT

Gene: HCH_01271: Lactate-responsive regulator LldR in Enterobacteria, GntR family
 
Marinobacter aqueolei
 
Marinobacter sp. ELB17
 
Oceanobacter sp. RED65
*
Oceanospirillum sp. MED92

Site:
position = -34
score = 6.38662
sequence = ATTGGTCTTACCAAT

Site:
position = -262
score = 6.24552
sequence = ATTGGTATTACCAAT

Gene: MED92_16130: Lactate-responsive regulator LldR in Enterobacteria, GntR family
 
Marinomonas sp. MWYL1
 
Saccharophagus degradans 2-40
 
Teredinibacter turnerae T7901
 
Cellvibrio japonicus Ueda107
 
Chromohalobacter salexigens DSM 3043
 
Reinekea sp. MED297
 
Alcanivorax borkumensis SK2
Lactate-responsive regulator LldR in Enterobacteria, GntR family
aceE
 
Hahella chejuensis KCTC 2396

Gene: HCH_01272: Pyruvate dehydrogenase E1 component (EC 1.2.4.1)
 
Marinobacter aqueolei

Gene: Maqu_3328: Pyruvate dehydrogenase E1 component (EC 1.2.4.1)
 
Marinobacter sp. ELB17

Gene: MELB17_03672: Pyruvate dehydrogenase E1 component (EC 1.2.4.1)
 
Oceanobacter sp. RED65

Gene: RED65_04795: Pyruvate dehydrogenase E1 component (EC 1.2.4.1)
 
Oceanospirillum sp. MED92

Gene: MED92_16125: Pyruvate dehydrogenase E1 component (EC 1.2.4.1)
 
Marinomonas sp. MWYL1

Gene: Mmwyl1_2307: Pyruvate dehydrogenase E1 component (EC 1.2.4.1)
 
Saccharophagus degradans 2-40

Gene: Sde_2573: Pyruvate dehydrogenase E1 component (EC 1.2.4.1)
 
Teredinibacter turnerae T7901

Gene: TERTU_1029: Pyruvate dehydrogenase E1 component (EC 1.2.4.1)
 
Cellvibrio japonicus Ueda107
 
Chromohalobacter salexigens DSM 3043

Gene: Csal_0855: Pyruvate dehydrogenase E1 component (EC 1.2.4.1)
 
Reinekea sp. MED297

Gene: MED297_14195: Pyruvate dehydrogenase E1 component (EC 1.2.4.1)
 
Alcanivorax borkumensis SK2

Gene: ABO_0622: Pyruvate dehydrogenase E1 component (EC 1.2.4.1)
Pyruvate dehydrogenase E1 component (EC 1.2.4.1)
aceF
 
Hahella chejuensis KCTC 2396

Gene: HCH_01273: Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12)
 
Marinobacter aqueolei

Gene: Maqu_3327: Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12)
 
Marinobacter sp. ELB17

Gene: MELB17_03677: Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12)
 
Oceanobacter sp. RED65

Gene: RED65_04790: Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12)
 
Oceanospirillum sp. MED92

Gene: MED92_16120: Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12)
 
Marinomonas sp. MWYL1

Gene: Mmwyl1_2306: Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12)
 
Saccharophagus degradans 2-40

Gene: Sde_2572: Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12)
 
Teredinibacter turnerae T7901

Gene: TERTU_1030: Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12)
 
Cellvibrio japonicus Ueda107
 
Chromohalobacter salexigens DSM 3043

Gene: Csal_0856: Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12)
 
Reinekea sp. MED297

Gene: MED297_14190: Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12)
 
Alcanivorax borkumensis SK2

Gene: ABO_0623: Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12)
Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12)
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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